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The map label for this gene is ccsB [H]

Identifier: 15607043

GI number: 15607043

Start: 1464647

End: 1466260

Strand: Direct

Name: ccsB [H]

Synonym: aq_2082

Alternate gene names: 15607043

Gene position: 1464647-1466260 (Clockwise)

Preceding gene: 15607042

Following gene: 15607048

Centisome position: 94.41

GC content: 43.87

Gene sequence:

>1614_bases
ATGAAGAGAGTGCTTGAATTTCTCGGAGGCTTCGGCGGTTTAGTTTTCGGATTTGTTTTCTTCGTTGGAATGTCCATTTT
AGGACTTTTTCACCTCGAAGAACACCCTCCCCTTTACTGGGCGGGCTTTTTTGCTTCAGTTTTTCTCTTCGTACTTTCTT
TCCTACTTAACCTGATAAACTGGGTAAAGGCTTTAATAAAGGATTATAAAAAGCACGGAAGTGTTCTTGCCTTCGTGTAC
GACTTCCTCGCTTCACTTAAGCTCGCAATATTCATAATGCTCGTTCTCGGAATTCTCTCCATGCTCGGTTCTACCTACAT
AAAACAGAACCAGTCCTTTGAGTGGTATCTGGATCAATTCGGGTACGACGTGGGTATATGGATATGGAAGCTCTGGCTCA
ACGACGTATTTCACTCCTGGTATTACATCCTCTTTATAGTTTTGCTCGCGGTAAACCTGATTTTCTGTTCCATAAAGAGA
CTTCCGAGAGTATGGAAGCAGGCTTTCAGTAAAGAAAGGATACTTAAACTGGACGAGCACGCGGAAAAGCACTTAAAGCC
CATAACCGTAAAAATTCCCGACAAGGATAAGGTTTTGAAGTTTTTACTGAAAAAGGGATTTAAGGTTTTCGTTGAAGAGG
AAGGAAATAAACTCTACGTGTTCGCAGAAAAGGGTAGGTTTTCAAGACTCGGCGTTTACATCACACACATAGCCCTCCTC
GTTATAATGGCGGGAGCACTGATTGACGCGATAGTTGGTGTGAGGGGAAGCCTTATAGTTGCGGAAGGGGATACAAACGA
CGTAATGCTCGTGGGTGCGGAACAAAAGCCCTACAAACTGCCTTTTGCGGTTCACCTGATAGACTTCAGGATAAAGACTT
ATGCGGAAGAAAACCCGAACGTGGATAAACGTTTTGCTCAGGCGGTGAGCTCTTATGAGAGTGATATTGAAATCATAAAC
GGCGGGAAAGTTGAAGCAAAGGGAACCGTTAAGGTTAACGAGCCCTTTGACTTTGGAAGGTACAGACTATTTCAGGCGAC
TTACGGAATTCTTGACGGAACGAGCGGTATGGGCGTTATAGTCGTTGACAGAAAGAAGGCACACGAAGATCCCGAAAAGG
CGGTAATAGGAACCTTTGAGATAAAAACGGGACAGGTTGTTGAGTTCAAAGACATGCTAATTTCCATAGACAGAGTTGTT
CTCAACGTGCACGATCCCAACAACAGGAACGAACTCGCACCGGCGGTAGTTTTAAAGGTTATGCTAAACAGAGAACTTTA
CAGCGTTCCCGTTATATACGACCCTAGATTAACCGCTCTTGTATTCTCTCAAATACCAGAACTAAAAGACTTTCCCTACA
TGTTCTTCATGAACGGGTTTGAACCTCTATTCTTCTCAGGCTTTGAGGTTTCCTACCACCCTGGAAGTGTAATTATATGG
ATAGGCTCGGCTATACTGGTTCTCGGAATGGTGGTGGCCTTCTACACGGTTCACAGAAAGGTGTGGATGAGGATAGAGGG
AGATACAGCAAAGGTAGCCTTTTACTCCCACAAGTTTAAAGAGGAATTTAAGAGGAGCTTTTTAAGGGAACTGGAGGAGT
TAAAGAGAGCTTGA

Upstream 100 bases:

>100_bases
AAGAACGTCAACGTAGTTGAGATACTCTCCAGGGATTTAATGGAAGAAATTAGAAGAAAGCTCGTGGATTTTTACAAGGA
AAAGATTGAGGAGTTAAAAA

Downstream 100 bases:

>100_bases
AAGGGATTTTATACTCTCCTCCAGTGCTTCCAGAAACTTGTTGTTTTCTTCCGGTTTCCCTACGCTTACCCTGAGGCACT
TTTGGAGTCCTTCCATGTAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 537; Mature: 537

Protein sequence:

>537_residues
MKRVLEFLGGFGGLVFGFVFFVGMSILGLFHLEEHPPLYWAGFFASVFLFVLSFLLNLINWVKALIKDYKKHGSVLAFVY
DFLASLKLAIFIMLVLGILSMLGSTYIKQNQSFEWYLDQFGYDVGIWIWKLWLNDVFHSWYYILFIVLLAVNLIFCSIKR
LPRVWKQAFSKERILKLDEHAEKHLKPITVKIPDKDKVLKFLLKKGFKVFVEEEGNKLYVFAEKGRFSRLGVYITHIALL
VIMAGALIDAIVGVRGSLIVAEGDTNDVMLVGAEQKPYKLPFAVHLIDFRIKTYAEENPNVDKRFAQAVSSYESDIEIIN
GGKVEAKGTVKVNEPFDFGRYRLFQATYGILDGTSGMGVIVVDRKKAHEDPEKAVIGTFEIKTGQVVEFKDMLISIDRVV
LNVHDPNNRNELAPAVVLKVMLNRELYSVPVIYDPRLTALVFSQIPELKDFPYMFFMNGFEPLFFSGFEVSYHPGSVIIW
IGSAILVLGMVVAFYTVHRKVWMRIEGDTAKVAFYSHKFKEEFKRSFLRELEELKRA

Sequences:

>Translated_537_residues
MKRVLEFLGGFGGLVFGFVFFVGMSILGLFHLEEHPPLYWAGFFASVFLFVLSFLLNLINWVKALIKDYKKHGSVLAFVY
DFLASLKLAIFIMLVLGILSMLGSTYIKQNQSFEWYLDQFGYDVGIWIWKLWLNDVFHSWYYILFIVLLAVNLIFCSIKR
LPRVWKQAFSKERILKLDEHAEKHLKPITVKIPDKDKVLKFLLKKGFKVFVEEEGNKLYVFAEKGRFSRLGVYITHIALL
VIMAGALIDAIVGVRGSLIVAEGDTNDVMLVGAEQKPYKLPFAVHLIDFRIKTYAEENPNVDKRFAQAVSSYESDIEIIN
GGKVEAKGTVKVNEPFDFGRYRLFQATYGILDGTSGMGVIVVDRKKAHEDPEKAVIGTFEIKTGQVVEFKDMLISIDRVV
LNVHDPNNRNELAPAVVLKVMLNRELYSVPVIYDPRLTALVFSQIPELKDFPYMFFMNGFEPLFFSGFEVSYHPGSVIIW
IGSAILVLGMVVAFYTVHRKVWMRIEGDTAKVAFYSHKFKEEFKRSFLRELEELKRA
>Mature_537_residues
MKRVLEFLGGFGGLVFGFVFFVGMSILGLFHLEEHPPLYWAGFFASVFLFVLSFLLNLINWVKALIKDYKKHGSVLAFVY
DFLASLKLAIFIMLVLGILSMLGSTYIKQNQSFEWYLDQFGYDVGIWIWKLWLNDVFHSWYYILFIVLLAVNLIFCSIKR
LPRVWKQAFSKERILKLDEHAEKHLKPITVKIPDKDKVLKFLLKKGFKVFVEEEGNKLYVFAEKGRFSRLGVYITHIALL
VIMAGALIDAIVGVRGSLIVAEGDTNDVMLVGAEQKPYKLPFAVHLIDFRIKTYAEENPNVDKRFAQAVSSYESDIEIIN
GGKVEAKGTVKVNEPFDFGRYRLFQATYGILDGTSGMGVIVVDRKKAHEDPEKAVIGTFEIKTGQVVEFKDMLISIDRVV
LNVHDPNNRNELAPAVVLKVMLNRELYSVPVIYDPRLTALVFSQIPELKDFPYMFFMNGFEPLFFSGFEVSYHPGSVIIW
IGSAILVLGMVVAFYTVHRKVWMRIEGDTAKVAFYSHKFKEEFKRSFLRELEELKRA

Specific function: Required during biogenesis of c-type cytochromes (cytochrome c6 and cytochrome f) at the step of heme attachment [H]

COG id: COG1333

COG function: function code O; ResB protein required for cytochrome c biosynthesis

Gene ontology:

Cell location: Cellular thylakoid membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ccs1/ccsB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007816 [H]

Pfam domain/function: PF05140 ResB [H]

EC number: NA

Molecular weight: Translated: 61602; Mature: 61602

Theoretical pI: Translated: 9.31; Mature: 9.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRVLEFLGGFGGLVFGFVFFVGMSILGLFHLEEHPPLYWAGFFASVFLFVLSFLLNLIN
CHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHH
WVKALIKDYKKHGSVLAFVYDFLASLKLAIFIMLVLGILSMLGSTYIKQNQSFEWYLDQF
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
GYDVGIWIWKLWLNDVFHSWYYILFIVLLAVNLIFCSIKRLPRVWKQAFSKERILKLDEH
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHH
AEKHLKPITVKIPDKDKVLKFLLKKGFKVFVEEEGNKLYVFAEKGRFSRLGVYITHIALL
HHHCCCCEEEECCCHHHHHHHHHHCCCEEEEEECCCEEEEEECCCCCHHHHHHHHHHHHH
VIMAGALIDAIVGVRGSLIVAEGDTNDVMLVGAEQKPYKLPFAVHLIDFRIKTYAEENPN
HHHHHHHHHHHHCCCCCEEEEECCCCCEEEEECCCCCCCCCEEEEEEHHHHHHHCCCCCC
VDKRFAQAVSSYESDIEIINGGKVEAKGTVKVNEPFDFGRYRLFQATYGILDGTSGMGVI
HHHHHHHHHHHCCCCCEEECCCEEEEEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCEEE
VVDRKKAHEDPEKAVIGTFEIKTGQVVEFKDMLISIDRVVLNVHDPNNRNELAPAVVLKV
EEECHHCCCCCCCCEEEEEEECCCCEEHHHHHHHHHHHEEEEECCCCCCCHHHHHHHHHH
MLNRELYSVPVIYDPRLTALVFSQIPELKDFPYMFFMNGFEPLFFSGFEVSYHPGSVIIW
HHCCHHEECCEEECCCHHHHHHHHCCCCCCCCCCEECCCCCCHHCCCEEEEECCCEEEEE
IGSAILVLGMVVAFYTVHRKVWMRIEGDTAKVAFYSHKFKEEFKRSFLRELEELKRA
HHHHHHHHHHHHHHHHHHHHHEEEEECCCEEEEHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKRVLEFLGGFGGLVFGFVFFVGMSILGLFHLEEHPPLYWAGFFASVFLFVLSFLLNLIN
CHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHH
WVKALIKDYKKHGSVLAFVYDFLASLKLAIFIMLVLGILSMLGSTYIKQNQSFEWYLDQF
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
GYDVGIWIWKLWLNDVFHSWYYILFIVLLAVNLIFCSIKRLPRVWKQAFSKERILKLDEH
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHH
AEKHLKPITVKIPDKDKVLKFLLKKGFKVFVEEEGNKLYVFAEKGRFSRLGVYITHIALL
HHHCCCCEEEECCCHHHHHHHHHHCCCEEEEEECCCEEEEEECCCCCHHHHHHHHHHHHH
VIMAGALIDAIVGVRGSLIVAEGDTNDVMLVGAEQKPYKLPFAVHLIDFRIKTYAEENPN
HHHHHHHHHHHHCCCCCEEEEECCCCCEEEEECCCCCCCCCEEEEEEHHHHHHHCCCCCC
VDKRFAQAVSSYESDIEIINGGKVEAKGTVKVNEPFDFGRYRLFQATYGILDGTSGMGVI
HHHHHHHHHHHCCCCCEEECCCEEEEEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCEEE
VVDRKKAHEDPEKAVIGTFEIKTGQVVEFKDMLISIDRVVLNVHDPNNRNELAPAVVLKV
EEECHHCCCCCCCCEEEEEEECCCCEEHHHHHHHHHHHEEEEECCCCCCCHHHHHHHHHH
MLNRELYSVPVIYDPRLTALVFSQIPELKDFPYMFFMNGFEPLFFSGFEVSYHPGSVIIW
HHCCHHEECCEEECCCHHHHHHHHCCCCCCCCCCEECCCCCCHHCCCEEEEECCCEEEEE
IGSAILVLGMVVAFYTVHRKVWMRIEGDTAKVAFYSHKFKEEFKRSFLRELEELKRA
HHHHHHHHHHHHHHHHHHHHHEEEEECCCEEEEHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA