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The map label for this gene is tldD [H]

Identifier: 15607006

GI number: 15607006

Start: 1422407

End: 1423621

Strand: Direct

Name: tldD [H]

Synonym: aq_2021

Alternate gene names: 15607006

Gene position: 1422407-1423621 (Clockwise)

Preceding gene: 15607005

Following gene: 15607007

Centisome position: 91.69

GC content: 47.65

Gene sequence:

>1215_bases
ATGTTAAAGGAAAAAGCAGGATACATTCTGTCCACTTTAATGTCTCAGGGCGGAGAGTACGGAGAAATCTTTTACGAGAA
ATCCAGAACCACGAGAATGCACTTAGAGGACAGAAAAATAGACAAAGTTACCCACGGATACGACGAAGGCGTAGGACTCA
GGTTAATAAAAAACGGGAAAACTTATTACGGATACACCACCAATCCGACCTTTGAAAATCTGAAAGAACTTGCAAAAATA
CTCGCAAGGGGCGAAGGGCACGGACCCGTAGCCATAGGAAAGCGTTACATTCAGGGCTATACGGAAGTTTTAATAGACCC
TGATAAGGAAAGTCTGAAGTTCAGGGCTGAAATCTTAAGGAGGGCTGACGAAAAGGCGAGGAGCTTCGGGGACAAGATAA
AACAGGTTCTTGCGGTCCTTATGGACAAAACCAGGGAGATTATGGTTATAAACACCTTAGGAGAAACTGCGGAAGACACA
CAAAAGAGGGTGGTTTTCTTTGTAGAAGTTGTTGCAAGCGACGGAGAAACTCTGCAGAGGGGGTATGAGAGCCTCGGGGG
AAGGAGAGGTTTTGAGATTTTCAACGAAACGCCTCCAGAAGTCATAGCGGAAAAAGCGGCAAAGAGGGCACTACTTATGC
TGAGTGCAAAACCTGCCCCCGCGGGAACTTTCACCGTGGTGATGTCCTCTCAGGCGGGTGGTACGATGATACACGAGGCG
GTGGGACACGGGCTTGAAGCAGACCTCGTTCAGCAGGGACTCTCCGTTTACGCTGGAAAGCTCGGAGAAAAAGTAGCCTC
GGAGCTCGTTACCGTAATAGATGATGCAACCCTTCCCTATCACAACGGCTCCTTTACGGTTGACGACGAAGGCGTTCCCG
CCCAGAGAAAGGTTTTAATAAAAGACGGGGTACTCGTAGGGTACATGTACGACAGACTCAGGGCTATGAAAGACGGAGTG
GAATCAACTGGAAATGGAAGGAGACAGAGTTACGCCCACATTCCCATAGTCAGGATGACAAACACCTTTATAGACAAAGG
CCAGGACAATCCGGAGGACATAATAAAGGACACCAAAAAGGGAGTACTCGTTGTGAAAATGGGCGGAGGAGAAGTAAACA
CCGTGACGGGAGATTTCGTTTTTGAAGTAATGGAAGGCTACATGATAGAAAACGGGGAGATTACTTATCCCATAAGGGGA
GCAACGCTCATATGA

Upstream 100 bases:

>100_bases
TAGCTGGATCACACTAATTGAACTCCAGAATAAAGGCTTTGCCTTTGTACCCTTTTAAAATAAAGACTTGAGGAGGAATT
AAATGAACCCAGTTAAAGAA

Downstream 100 bases:

>100_bases
AACGGACCCAAAGCCCTTCAGGACGTGGACGCTGTCGGAAACGACCTCCGGTGGGCTATACGAACGTGTGGAAAAGATGG
GCAGGGTGTTCCCGTAACAG

Product: TldD protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 404; Mature: 404

Protein sequence:

>404_residues
MLKEKAGYILSTLMSQGGEYGEIFYEKSRTTRMHLEDRKIDKVTHGYDEGVGLRLIKNGKTYYGYTTNPTFENLKELAKI
LARGEGHGPVAIGKRYIQGYTEVLIDPDKESLKFRAEILRRADEKARSFGDKIKQVLAVLMDKTREIMVINTLGETAEDT
QKRVVFFVEVVASDGETLQRGYESLGGRRGFEIFNETPPEVIAEKAAKRALLMLSAKPAPAGTFTVVMSSQAGGTMIHEA
VGHGLEADLVQQGLSVYAGKLGEKVASELVTVIDDATLPYHNGSFTVDDEGVPAQRKVLIKDGVLVGYMYDRLRAMKDGV
ESTGNGRRQSYAHIPIVRMTNTFIDKGQDNPEDIIKDTKKGVLVVKMGGGEVNTVTGDFVFEVMEGYMIENGEITYPIRG
ATLI

Sequences:

>Translated_404_residues
MLKEKAGYILSTLMSQGGEYGEIFYEKSRTTRMHLEDRKIDKVTHGYDEGVGLRLIKNGKTYYGYTTNPTFENLKELAKI
LARGEGHGPVAIGKRYIQGYTEVLIDPDKESLKFRAEILRRADEKARSFGDKIKQVLAVLMDKTREIMVINTLGETAEDT
QKRVVFFVEVVASDGETLQRGYESLGGRRGFEIFNETPPEVIAEKAAKRALLMLSAKPAPAGTFTVVMSSQAGGTMIHEA
VGHGLEADLVQQGLSVYAGKLGEKVASELVTVIDDATLPYHNGSFTVDDEGVPAQRKVLIKDGVLVGYMYDRLRAMKDGV
ESTGNGRRQSYAHIPIVRMTNTFIDKGQDNPEDIIKDTKKGVLVVKMGGGEVNTVTGDFVFEVMEGYMIENGEITYPIRG
ATLI
>Mature_404_residues
MLKEKAGYILSTLMSQGGEYGEIFYEKSRTTRMHLEDRKIDKVTHGYDEGVGLRLIKNGKTYYGYTTNPTFENLKELAKI
LARGEGHGPVAIGKRYIQGYTEVLIDPDKESLKFRAEILRRADEKARSFGDKIKQVLAVLMDKTREIMVINTLGETAEDT
QKRVVFFVEVVASDGETLQRGYESLGGRRGFEIFNETPPEVIAEKAAKRALLMLSAKPAPAGTFTVVMSSQAGGTMIHEA
VGHGLEADLVQQGLSVYAGKLGEKVASELVTVIDDATLPYHNGSFTVDDEGVPAQRKVLIKDGVLVGYMYDRLRAMKDGV
ESTGNGRRQSYAHIPIVRMTNTFIDKGQDNPEDIIKDTKKGVLVVKMGGGEVNTVTGDFVFEVMEGYMIENGEITYPIRG
ATLI

Specific function: Suppresses the inhibitory activity of the carbon storage regulator (CsrA) [H]

COG id: COG0312

COG function: function code R; Predicted Zn-dependent proteases and their inactivated homologs

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase U62 family [H]

Homologues:

Organism=Escherichia coli, GI1789640, Length=407, Percent_Identity=40.04914004914, Blast_Score=264, Evalue=8e-72,
Organism=Escherichia coli, GI1790682, Length=234, Percent_Identity=24.7863247863248, Blast_Score=65, Evalue=6e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002510 [H]

Pfam domain/function: PF01523 PmbA_TldD [H]

EC number: NA

Molecular weight: Translated: 44581; Mature: 44581

Theoretical pI: Translated: 6.21; Mature: 6.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKEKAGYILSTLMSQGGEYGEIFYEKSRTTRMHLEDRKIDKVTHGYDEGVGLRLIKNGK
CCCCHHHHHHHHHHHCCCCEEHEEEECCCCEEEECCHHHHHHHHCCCCCCCCEEEEECCC
TYYGYTTNPTFENLKELAKILARGEGHGPVAIGKRYIQGYTEVLIDPDKESLKFRAEILR
EEEEECCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHEEECCCHHHHHHHHHHHH
RADEKARSFGDKIKQVLAVLMDKTREIMVINTLGETAEDTQKRVVFFVEVVASDGETLQR
HHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHEEEEEEEECCCCHHHHH
GYESLGGRRGFEIFNETPPEVIAEKAAKRALLMLSAKPAPAGTFTVVMSSQAGGTMIHEA
HHHHHCCCCCCHHCCCCCHHHHHHHHHHHEEEEEECCCCCCCEEEEEEECCCCCHHHHHH
VGHGLEADLVQQGLSVYAGKLGEKVASELVTVIDDATLPYHNGSFTVDDEGVPAQRKVLI
HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCHHHEEEE
KDGVLVGYMYDRLRAMKDGVESTGNGRRQSYAHIPIVRMTNTFIDKGQDNPEDIIKDTKK
ECCEEEHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEHHHHHHCCCCCHHHHHHHCCC
GVLVVKMGGGEVNTVTGDFVFEVMEGYMIENGEITYPIRGATLI
CEEEEEECCCEEEEEHHHHHHHHHHCEEEECCEEEEEECCCCCC
>Mature Secondary Structure
MLKEKAGYILSTLMSQGGEYGEIFYEKSRTTRMHLEDRKIDKVTHGYDEGVGLRLIKNGK
CCCCHHHHHHHHHHHCCCCEEHEEEECCCCEEEECCHHHHHHHHCCCCCCCCEEEEECCC
TYYGYTTNPTFENLKELAKILARGEGHGPVAIGKRYIQGYTEVLIDPDKESLKFRAEILR
EEEEECCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHEEECCCHHHHHHHHHHHH
RADEKARSFGDKIKQVLAVLMDKTREIMVINTLGETAEDTQKRVVFFVEVVASDGETLQR
HHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHEEEEEEEECCCCHHHHH
GYESLGGRRGFEIFNETPPEVIAEKAAKRALLMLSAKPAPAGTFTVVMSSQAGGTMIHEA
HHHHHCCCCCCHHCCCCCHHHHHHHHHHHEEEEEECCCCCCCEEEEEEECCCCCHHHHHH
VGHGLEADLVQQGLSVYAGKLGEKVASELVTVIDDATLPYHNGSFTVDDEGVPAQRKVLI
HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCHHHEEEE
KDGVLVGYMYDRLRAMKDGVESTGNGRRQSYAHIPIVRMTNTFIDKGQDNPEDIIKDTKK
ECCEEEHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEHHHHHHCCCCCHHHHHHHCCC
GVLVVKMGGGEVNTVTGDFVFEVMEGYMIENGEITYPIRGATLI
CEEEEEECCCEEEEEHHHHHHHHHHCEEEECCEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]