Definition Aquifex aeolicus VF5, complete genome.
Accession NC_000918
Length 1,551,335

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The map label for this gene is flhB

Identifier: 15607000

GI number: 15607000

Start: 1416211

End: 1417263

Strand: Direct

Name: flhB

Synonym: aq_2014

Alternate gene names: 15607000

Gene position: 1416211-1417263 (Clockwise)

Preceding gene: 15606999

Following gene: 15607002

Centisome position: 91.29

GC content: 43.68

Gene sequence:

>1053_bases
ATGGCTGAGGAGCATAAAACAGAACGGGCAACTCCGTACAAAAGGAGGAAGGTAAGGGAAGAGGGAAACGTAGCAAAGAG
CCACGAGATAGCATCCTCCCTTGTAGTCCTCCTTTCCCTTCTCCTATTACTCTTCCTTGGAACTTACATAGCTAAAGAAG
TAATACTCATTTTTCTGGCGGTAACGGGATACGTCCACGCGGATATATCCGAGCTAGGAAGCCTTTACGAGAACTTTTAC
GAAAACATCGTTAAGGTTTTAACCCCGCTGTTTTTCTTAGCTCTATTAGTCGTCATTCTTTCTCACGTGGCACAGTTCGG
ATTTATTTTTACCTTGAAGCCTCTCTCTTTTAAGTGGGAAAGGATAAACCCTTTTGAAGGTATAAAGCGATTAATCTCTC
TAACCACTTTATTTGAAACGGTAAAAAACACCCTGAAGGCTTTTCTGCTTATAGGTATAGCGGTTTTCGTTTTAAAGGGC
AGTCTTTACTTTTTCCTCTCCTCTTCCACTTACCCTTTGGCAGAAACTCTGAAGAGTTTTATTAAGACCTCAGCTATAAC
GCTTATAACCCTCGGAGTGGTTGCCCTCCTAATAGCCTTTCTGGATTACGCCTTCAAACGCTGGCAGTACGAAAAGAAGA
TAATGATGTCGAGAAGGGAATTGAAGGAGGAGTACAAACAACTGGAAGGACACCCGGAAGTAAAGAGCAGGATAAAGGCA
AGGATGAGGGAGCTCGCAAAGAGCAGGATGATGGCAGAAGTTCCCAAGGCAACAGTAGTTATCACAAACCCAACACACAT
AGCGATAGCCCTCAAATACAATCCGGAGAAAGACAAAGCTCCCGTTGTTGTTGCAAAGGGAAAGGGCACTATAGCCCAGA
AAATCGTTGAGATTGCAGAAAACTACAGTATACCCGTAGTGAGGAAACCGGAACTCGCAAGGGCACTCTACCCTGCGGTT
GAGGTAGGAAAGGAAATATCCCCTAAATTTTACAAAGCCGTAGCGGAAATAATAGCCTACGTTATGTTCAAAAAGAAAAA
GGTTTACGCCTGA

Upstream 100 bases:

>100_bases
CTGGATCTGGGACCGTGGCAGGAGATTTTTTACGCGGAGTTTGACGGACAGAGACCGAAAAGAGTTGTTATAAAGATAAT
CGGGGAGTAAATAATTCTTA

Downstream 100 bases:

>100_bases
GGACGCAGGAAAGAAAGCACCTTCTGGGCTACCTTTTTAGAAGCCCTTATGCAGTCTGCGGTGGAGACCCCGTAGAGCCA
GTTCCCCGTCAGGAACAGCC

Product: flagellar biosynthetic protein FlhB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 350; Mature: 349

Protein sequence:

>350_residues
MAEEHKTERATPYKRRKVREEGNVAKSHEIASSLVVLLSLLLLLFLGTYIAKEVILIFLAVTGYVHADISELGSLYENFY
ENIVKVLTPLFFLALLVVILSHVAQFGFIFTLKPLSFKWERINPFEGIKRLISLTTLFETVKNTLKAFLLIGIAVFVLKG
SLYFFLSSSTYPLAETLKSFIKTSAITLITLGVVALLIAFLDYAFKRWQYEKKIMMSRRELKEEYKQLEGHPEVKSRIKA
RMRELAKSRMMAEVPKATVVITNPTHIAIALKYNPEKDKAPVVVAKGKGTIAQKIVEIAENYSIPVVRKPELARALYPAV
EVGKEISPKFYKAVAEIIAYVMFKKKKVYA

Sequences:

>Translated_350_residues
MAEEHKTERATPYKRRKVREEGNVAKSHEIASSLVVLLSLLLLLFLGTYIAKEVILIFLAVTGYVHADISELGSLYENFY
ENIVKVLTPLFFLALLVVILSHVAQFGFIFTLKPLSFKWERINPFEGIKRLISLTTLFETVKNTLKAFLLIGIAVFVLKG
SLYFFLSSSTYPLAETLKSFIKTSAITLITLGVVALLIAFLDYAFKRWQYEKKIMMSRRELKEEYKQLEGHPEVKSRIKA
RMRELAKSRMMAEVPKATVVITNPTHIAIALKYNPEKDKAPVVVAKGKGTIAQKIVEIAENYSIPVVRKPELARALYPAV
EVGKEISPKFYKAVAEIIAYVMFKKKKVYA
>Mature_349_residues
AEEHKTERATPYKRRKVREEGNVAKSHEIASSLVVLLSLLLLLFLGTYIAKEVILIFLAVTGYVHADISELGSLYENFYE
NIVKVLTPLFFLALLVVILSHVAQFGFIFTLKPLSFKWERINPFEGIKRLISLTTLFETVKNTLKAFLLIGIAVFVLKGS
LYFFLSSSTYPLAETLKSFIKTSAITLITLGVVALLIAFLDYAFKRWQYEKKIMMSRRELKEEYKQLEGHPEVKSRIKAR
MRELAKSRMMAEVPKATVVITNPTHIAIALKYNPEKDKAPVVVAKGKGTIAQKIVEIAENYSIPVVRKPELARALYPAVE
VGKEISPKFYKAVAEIIAYVMFKKKKVYA

Specific function: Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with fliI and fliH, may constitute the export apparatus of flagellin

COG id: COG1377

COG function: function code NU; Flagellar biosynthesis pathway, component FlhB

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the type III secretion exporter family

Homologues:

Organism=Escherichia coli, GI1788188, Length=349, Percent_Identity=34.9570200573066, Blast_Score=189, Evalue=3e-49,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): FLHB_AQUAE (O67813)

Other databases:

- EMBL:   AE000657
- PIR:   A70473
- RefSeq:   NP_214382.1
- ProteinModelPortal:   O67813
- SMR:   O67813
- GeneID:   1193710
- GenomeReviews:   AE000657_GR
- KEGG:   aae:aq_2014
- NMPDR:   fig|224324.1.peg.1397
- HOGENOM:   HBG529770
- OMA:   NAPVQEA
- PhylomeDB:   O67813
- ProtClustDB:   CLSK2299905
- BioCyc:   AAEO224324:AQ_2014-MONOMER
- InterPro:   IPR006136
- InterPro:   IPR006135
- PRINTS:   PR00950
- TIGRFAMs:   TIGR00328

Pfam domain/function: PF01312 Bac_export_2

EC number: NA

Molecular weight: Translated: 39716; Mature: 39585

Theoretical pI: Translated: 10.31; Mature: 10.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xb458938)-; HASH(0xce4dabc)-; HASH(0xec4b698)-; HASH(0xec13310)-;

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAEEHKTERATPYKRRKVREEGNVAKSHEIASSLVVLLSLLLLLFLGTYIAKEVILIFLA
CCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VTGYVHADISELGSLYENFYENIVKVLTPLFFLALLVVILSHVAQFGFIFTLKPLSFKWE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCC
RINPFEGIKRLISLTTLFETVKNTLKAFLLIGIAVFVLKGSLYFFLSSSTYPLAETLKSF
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEECCCCCCHHHHHHHH
IKTSAITLITLGVVALLIAFLDYAFKRWQYEKKIMMSRRELKEEYKQLEGHPEVKSRIKA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
RMRELAKSRMMAEVPKATVVITNPTHIAIALKYNPEKDKAPVVVAKGKGTIAQKIVEIAE
HHHHHHHHHHHHHCCCCEEEEECCCEEEEEEEECCCCCCCCEEEECCCCHHHHHHHHHHH
NYSIPVVRKPELARALYPAVEVGKEISPKFYKAVAEIIAYVMFKKKKVYA
CCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCH
>Mature Secondary Structure 
AEEHKTERATPYKRRKVREEGNVAKSHEIASSLVVLLSLLLLLFLGTYIAKEVILIFLA
CCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VTGYVHADISELGSLYENFYENIVKVLTPLFFLALLVVILSHVAQFGFIFTLKPLSFKWE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCC
RINPFEGIKRLISLTTLFETVKNTLKAFLLIGIAVFVLKGSLYFFLSSSTYPLAETLKSF
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEECCCCCCHHHHHHHH
IKTSAITLITLGVVALLIAFLDYAFKRWQYEKKIMMSRRELKEEYKQLEGHPEVKSRIKA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
RMRELAKSRMMAEVPKATVVITNPTHIAIALKYNPEKDKAPVVVAKGKGTIAQKIVEIAE
HHHHHHHHHHHHHCCCCEEEEECCCEEEEEEEECCCCCCCCEEEECCCCHHHHHHHHHHH
NYSIPVVRKPELARALYPAVEVGKEISPKFYKAVAEIIAYVMFKKKKVYA
CCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCH

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9537320