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The map label for this gene is fliD

Identifier: 15606992

GI number: 15606992

Start: 1407448

End: 1408773

Strand: Direct

Name: fliD

Synonym: aq_2001

Alternate gene names: 15606992

Gene position: 1407448-1408773 (Clockwise)

Preceding gene: 15606991

Following gene: 15606993

Centisome position: 90.72

GC content: 40.05

Gene sequence:

>1326_bases
ATGGCCGGAGAGCTTTACTTTTCGGGAGTAACCGGCGCTTACGACTGGGGCAGTGTTCTTGATAACATAATGGCTGTAAA
AAGTATTCCAATTCAAAAACTGCAACAGAAAAAGCAATTAATAAACCAAAAACTCCAGATACTCGGTGAATTTTCTCAAA
AACTGAGCGATTTAAAAAACTTAATTGAAAATTTTAATCTTGAAAGTGCTTTAAAGACTAAAAAGGCTGACGTTTCTGAT
TCAGATGTAATTTCAGTTTCCGTGTCGGAAAATGCGCCCGAAATTTCCTTCAGCGTTAACGTTTTGAACACCGCGAGTAA
AGAAATACTCGTTTACGATGCAGGTTTTAATTCCTTGGACGAAACTATAGGGAGTGACGGAAGTTTTACACTGAGGTACT
ACACGAGTCCCACCGATTACGTGGAGTACACGATAGATTACTCTTTGATTGATACCTTAAAGGACATCGTAAATAAGATA
AACGAAACTCAGGACTACGTTAAGGCTTCCATTTATTACGACGGAAACAAGTACAAGTTAATGCTTGCGGAGACCTCAGA
AGAAAACTCTACCGTGGAAACAGCTCCTGACCTTTCAACAAAAGCCATACACCTCCTCGGAACACTGCCTCACCAGTTCG
GAAATAACGTTCTTATTCAACAAGCTAAGAACGCAAGGATACAGATAGGAAGCGGGGACGTTATAGAGAGTGCGGGAAAT
ACCTTTGAAAACGTTATAGAAGGAGTGAGCATAAGCGCAAAGAGAGCAGGTACTTCCGAGGTAAGTATTTCTCAGGATTT
CAGTAAGATAAGGGAATTTTTAAATAATTTCGTGAAGTCTTACAACGAAGTCGTTTCTCAAGTAAAGAGTTTAACCCTCG
GAGAAAATGCACCTTTTAGGGGTGAAAACACGATAATGAACGTAAAGTACGGGCTTTCCGATACGCTCACACCGCTCATG
GAACTCGGTTTAATAGAGTACAAGGAAGACGGAACCATATCCCTGAGCGGGAATCTGGAAAGTGTTATTAACGAAAAGCC
TGATGAATTTAAGTTAAAAATGACTCAATTCTTGGAGAGTGCAAAAGCTGTAGCTAAGGTAAATTACGAGGCTTTTGAAG
ACTTCAAGGAATACTTGAACGACCAGGCGGAAAGGATAGACGAAAATATCAGACTCCTTAGCCAGAGGCTGGTTCAGGAG
GAACAAATACTTAAAAGGCAATTTGCACAGCTGGAAGACTTTATGAATTACGCAAATCAAATAAGGGAGAGGTTAAAGCA
GTTTATGGTATCTATCTCTGAAATGAACGGAGGTAATAACAAATGA

Upstream 100 bases:

>100_bases
CAAATAAAGTAATCAGGCAAATTCCTCCCGATTACCTTTTAGAACTAATGAAGAGGATAGACGAGATGTTAGGTATTTTA
ATAAACGAGAGGGTATAAAT

Downstream 100 bases:

>100_bases
GAAACATTGCAGAGGCTTACTTTCAAAATATGGTAGAAACCGCCACACCTCTTGAGCAGATAATACTCCTCTACGATAAA
GCGATAGAATGCTTAGAAAG

Product: flagellar hook associated protein FliD

Products: NA

Alternate protein names: HAP2; Filament cap protein

Number of amino acids: Translated: 441; Mature: 440

Protein sequence:

>441_residues
MAGELYFSGVTGAYDWGSVLDNIMAVKSIPIQKLQQKKQLINQKLQILGEFSQKLSDLKNLIENFNLESALKTKKADVSD
SDVISVSVSENAPEISFSVNVLNTASKEILVYDAGFNSLDETIGSDGSFTLRYYTSPTDYVEYTIDYSLIDTLKDIVNKI
NETQDYVKASIYYDGNKYKLMLAETSEENSTVETAPDLSTKAIHLLGTLPHQFGNNVLIQQAKNARIQIGSGDVIESAGN
TFENVIEGVSISAKRAGTSEVSISQDFSKIREFLNNFVKSYNEVVSQVKSLTLGENAPFRGENTIMNVKYGLSDTLTPLM
ELGLIEYKEDGTISLSGNLESVINEKPDEFKLKMTQFLESAKAVAKVNYEAFEDFKEYLNDQAERIDENIRLLSQRLVQE
EQILKRQFAQLEDFMNYANQIRERLKQFMVSISEMNGGNNK

Sequences:

>Translated_441_residues
MAGELYFSGVTGAYDWGSVLDNIMAVKSIPIQKLQQKKQLINQKLQILGEFSQKLSDLKNLIENFNLESALKTKKADVSD
SDVISVSVSENAPEISFSVNVLNTASKEILVYDAGFNSLDETIGSDGSFTLRYYTSPTDYVEYTIDYSLIDTLKDIVNKI
NETQDYVKASIYYDGNKYKLMLAETSEENSTVETAPDLSTKAIHLLGTLPHQFGNNVLIQQAKNARIQIGSGDVIESAGN
TFENVIEGVSISAKRAGTSEVSISQDFSKIREFLNNFVKSYNEVVSQVKSLTLGENAPFRGENTIMNVKYGLSDTLTPLM
ELGLIEYKEDGTISLSGNLESVINEKPDEFKLKMTQFLESAKAVAKVNYEAFEDFKEYLNDQAERIDENIRLLSQRLVQE
EQILKRQFAQLEDFMNYANQIRERLKQFMVSISEMNGGNNK
>Mature_440_residues
AGELYFSGVTGAYDWGSVLDNIMAVKSIPIQKLQQKKQLINQKLQILGEFSQKLSDLKNLIENFNLESALKTKKADVSDS
DVISVSVSENAPEISFSVNVLNTASKEILVYDAGFNSLDETIGSDGSFTLRYYTSPTDYVEYTIDYSLIDTLKDIVNKIN
ETQDYVKASIYYDGNKYKLMLAETSEENSTVETAPDLSTKAIHLLGTLPHQFGNNVLIQQAKNARIQIGSGDVIESAGNT
FENVIEGVSISAKRAGTSEVSISQDFSKIREFLNNFVKSYNEVVSQVKSLTLGENAPFRGENTIMNVKYGLSDTLTPLME
LGLIEYKEDGTISLSGNLESVINEKPDEFKLKMTQFLESAKAVAKVNYEAFEDFKEYLNDQAERIDENIRLLSQRLVQEE
QILKRQFAQLEDFMNYANQIRERLKQFMVSISEMNGGNNK

Specific function: Required for the morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the

COG id: COG1345

COG function: function code N; Flagellar capping protein

Gene ontology:

Cell location: Secreted. Bacterial flagellum

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliD family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): FLID_AQUAE (O67805)

Other databases:

- EMBL:   AE000657
- PIR:   A70472
- RefSeq:   NP_214374.1
- GeneID:   1193702
- GenomeReviews:   AE000657_GR
- KEGG:   aae:aq_2001
- NMPDR:   fig|224324.1.peg.1389
- HOGENOM:   HBG729818
- OMA:   SISEMNG
- ProtClustDB:   CLSK2392983
- BioCyc:   AAEO224324:AQ_2001-MONOMER
- InterPro:   IPR010810
- InterPro:   IPR010809
- InterPro:   IPR003481

Pfam domain/function: PF07196 Flagellin_IN; PF07195 FliD_C; PF02465 FliD_N

EC number: NA

Molecular weight: Translated: 49461; Mature: 49330

Theoretical pI: Translated: 4.44; Mature: 4.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGELYFSGVTGAYDWGSVLDNIMAVKSIPIQKLQQKKQLINQKLQILGEFSQKLSDLKN
CCCCEEECCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LIENFNLESALKTKKADVSDSDVISVSVSENAPEISFSVNVLNTASKEILVYDAGFNSLD
HHHCCCHHHHHHHHCCCCCCCCEEEEEECCCCCCEEEEEEEECCCCCEEEEEECCCCHHH
ETIGSDGSFTLRYYTSPTDYVEYTIDYSLIDTLKDIVNKINETQDYVKASIYYDGNKYKL
HHHCCCCCEEEEEECCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCEEEE
MLAETSEENSTVETAPDLSTKAIHLLGTLPHQFGNNVLIQQAKNARIQIGSGDVIESAGN
EEEECCCCCCCCCCCCCCCHHHHHHHHHCHHHHCCCEEEEECCCCEEEECCCCHHHHCCC
TFENVIEGVSISAKRAGTSEVSISQDFSKIREFLNNFVKSYNEVVSQVKSLTLGENAPFR
HHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
GENTIMNVKYGLSDTLTPLMELGLIEYKEDGTISLSGNLESVINEKPDEFKLKMTQFLES
CCCCEEEEECCCCHHHHHHHHHCCEEECCCCEEEECCCHHHHHCCCCHHHHHHHHHHHHH
AKAVAKVNYEAFEDFKEYLNDQAERIDENIRLLSQRLVQEEQILKRQFAQLEDFMNYANQ
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IRERLKQFMVSISEMNGGNNK
HHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
AGELYFSGVTGAYDWGSVLDNIMAVKSIPIQKLQQKKQLINQKLQILGEFSQKLSDLKN
CCCEEECCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LIENFNLESALKTKKADVSDSDVISVSVSENAPEISFSVNVLNTASKEILVYDAGFNSLD
HHHCCCHHHHHHHHCCCCCCCCEEEEEECCCCCCEEEEEEEECCCCCEEEEEECCCCHHH
ETIGSDGSFTLRYYTSPTDYVEYTIDYSLIDTLKDIVNKINETQDYVKASIYYDGNKYKL
HHHCCCCCEEEEEECCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCEEEE
MLAETSEENSTVETAPDLSTKAIHLLGTLPHQFGNNVLIQQAKNARIQIGSGDVIESAGN
EEEECCCCCCCCCCCCCCCHHHHHHHHHCHHHHCCCEEEEECCCCEEEECCCCHHHHCCC
TFENVIEGVSISAKRAGTSEVSISQDFSKIREFLNNFVKSYNEVVSQVKSLTLGENAPFR
HHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
GENTIMNVKYGLSDTLTPLMELGLIEYKEDGTISLSGNLESVINEKPDEFKLKMTQFLES
CCCCEEEEECCCCHHHHHHHHHCCEEECCCCEEEECCCHHHHHCCCCHHHHHHHHHHHHH
AKAVAKVNYEAFEDFKEYLNDQAERIDENIRLLSQRLVQEEQILKRQFAQLEDFMNYANQ
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IRERLKQFMVSISEMNGGNNK
HHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9537320