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The map label for this gene is ymdB [H]

Identifier: 15606849

GI number: 15606849

Start: 1266721

End: 1267503

Strand: Direct

Name: ymdB [H]

Synonym: aq_1794

Alternate gene names: 15606849

Gene position: 1266721-1267503 (Clockwise)

Preceding gene: 15606836

Following gene: 15606850

Centisome position: 81.65

GC content: 45.98

Gene sequence:

>783_bases
ATGAGAATACTTGCCATCGGAGACATCATAGGCAGACCCGGAAGGAAAGCCTTAAGAGAACTCCTGCCGCAACTCAAGGA
AGAGGTAGCCTACGACGTCGTTATAGCAAACGTTGAAAACTCCGCAGGAGGCTTTGGGATAACCAAGAAGGTTTACGAGG
AGCTCCTTGAGATAGGCATAGATGTAATGACTTCGGGAAATCACATCTGGGATAAGAAGGAGGTTTACAACTTCATCGGT
GAAGCCTACAACCTTCTGAGACCAGCAAATTACCCCGAAGGCGTTCCCGGGAGGGGTTACGGGATATTCAAGAAAAACGG
CGTTGAGTTCGCGGTAATAAACCTTATGGGAAAGGTTTTCATGGACTGTAACCTAGAAAATCCATTCAAAACCTTTGACA
GGATATACGATGAACTGAAGGACAAGGTAAAGATAATTGTCGTAGACTTTCACGCAGAAGCTACTTCCGAGAAGTGGGCT
TTCGGGATTTACGTGGACGGGAGGGCTTCCTTTGTGTACGGCACGCACACACACGTCCCCACCGCGGATGAATTTATCCT
GAAAAAGGGAACTGGTTACGTGAGCGATATCGGAATGACTGGTGTATGGTACTCCGCAATAGGAATGAAACCAAAGGAGG
CGATAGAACGTTTTCTTTTAAGCCTGCCGAGGAGGTTTGAAGTGGAGGATAAAGGAGAGATAATGTTCAACGCAGTTCTC
GTTGACATAGATGAAGAAACAGGTAAAACTAAGAGTATAGAGAGGATAAAGAGGTTCCTATGA

Upstream 100 bases:

>100_bases
TGTAAAAAGGATAATAAGTTCGGCGGTTAAGCGGAAATTTTGGAAAAGTGTGATGGACCACACATTAAGAGCGTGCTTCC
ACATTCTAAAATGAGTATAC

Downstream 100 bases:

>100_bases
GGGAGGTAATAACGCTTCTCTTTGCACTCGTTTCGTTTATACACGGAAGCATTTCGGAGAAGTACGAACTATACAGAGAG
TTTTTAGAAACAAAGAATGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 260; Mature: 260

Protein sequence:

>260_residues
MRILAIGDIIGRPGRKALRELLPQLKEEVAYDVVIANVENSAGGFGITKKVYEELLEIGIDVMTSGNHIWDKKEVYNFIG
EAYNLLRPANYPEGVPGRGYGIFKKNGVEFAVINLMGKVFMDCNLENPFKTFDRIYDELKDKVKIIVVDFHAEATSEKWA
FGIYVDGRASFVYGTHTHVPTADEFILKKGTGYVSDIGMTGVWYSAIGMKPKEAIERFLLSLPRRFEVEDKGEIMFNAVL
VDIDEETGKTKSIERIKRFL

Sequences:

>Translated_260_residues
MRILAIGDIIGRPGRKALRELLPQLKEEVAYDVVIANVENSAGGFGITKKVYEELLEIGIDVMTSGNHIWDKKEVYNFIG
EAYNLLRPANYPEGVPGRGYGIFKKNGVEFAVINLMGKVFMDCNLENPFKTFDRIYDELKDKVKIIVVDFHAEATSEKWA
FGIYVDGRASFVYGTHTHVPTADEFILKKGTGYVSDIGMTGVWYSAIGMKPKEAIERFLLSLPRRFEVEDKGEIMFNAVL
VDIDEETGKTKSIERIKRFL
>Mature_260_residues
MRILAIGDIIGRPGRKALRELLPQLKEEVAYDVVIANVENSAGGFGITKKVYEELLEIGIDVMTSGNHIWDKKEVYNFIG
EAYNLLRPANYPEGVPGRGYGIFKKNGVEFAVINLMGKVFMDCNLENPFKTFDRIYDELKDKVKIIVVDFHAEATSEKWA
FGIYVDGRASFVYGTHTHVPTADEFILKKGTGYVSDIGMTGVWYSAIGMKPKEAIERFLLSLPRRFEVEDKGEIMFNAVL
VDIDEETGKTKSIERIKRFL

Specific function: Unknown

COG id: COG1692

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005235 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29388; Mature: 29388

Theoretical pI: Translated: 5.80; Mature: 5.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRILAIGDIIGRPGRKALRELLPQLKEEVAYDVVIANVENSAGGFGITKKVYEELLEIGI
CEEEEECHHHCCCCHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCHHHHHHHHHHCCC
DVMTSGNHIWDKKEVYNFIGEAYNLLRPANYPEGVPGRGYGIFKKNGVEFAVINLMGKVF
EEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHH
MDCNLENPFKTFDRIYDELKDKVKIIVVDFHAEATSEKWAFGIYVDGRASFVYGTHTHVP
HCCCCCCHHHHHHHHHHHHHCCEEEEEEEECCCCCCCCEEEEEEECCCEEEEEECCCCCC
TADEFILKKGTGYVSDIGMTGVWYSAIGMKPKEAIERFLLSLPRRFEVEDKGEIMFNAVL
CHHHHHHHCCCCCHHHCCCCHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCEEEEEEE
VDIDEETGKTKSIERIKRFL
EEECCCCCCHHHHHHHHHCC
>Mature Secondary Structure
MRILAIGDIIGRPGRKALRELLPQLKEEVAYDVVIANVENSAGGFGITKKVYEELLEIGI
CEEEEECHHHCCCCHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCHHHHHHHHHHCCC
DVMTSGNHIWDKKEVYNFIGEAYNLLRPANYPEGVPGRGYGIFKKNGVEFAVINLMGKVF
EEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHH
MDCNLENPFKTFDRIYDELKDKVKIIVVDFHAEATSEKWAFGIYVDGRASFVYGTHTHVP
HCCCCCCHHHHHHHHHHHHHCCEEEEEEEECCCCCCCCEEEEEEECCCEEEEEECCCCCC
TADEFILKKGTGYVSDIGMTGVWYSAIGMKPKEAIERFLLSLPRRFEVEDKGEIMFNAVL
CHHHHHHHCCCCCHHHCCCCHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCEEEEEEE
VDIDEETGKTKSIERIKRFL
EEECCCCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]