Click here to switch to the map view.

The map label for this gene is degT [H]

Identifier: 15606803

GI number: 15606803

Start: 1212399

End: 1213439

Strand: Direct

Name: degT [H]

Synonym: aq_1724

Alternate gene names: 15606803

Gene position: 1212399-1213439 (Clockwise)

Preceding gene: 15606799

Following gene: 15606804

Centisome position: 78.15

GC content: 45.82

Gene sequence:

>1041_bases
ATGAAAATTCCCATTATTGGTCTGGAGTTTTCCGAAGAGGAGAAAAAAGCACTGACGGAAATCCTTGAGAGTAAGCGCAT
AACGAGAGACGGATGGACGGATACCTTTCAGGAGGCGTTTGCCGAGTTTTTGAACGTTAAATACTGTGCAACAGTCTGTT
CTGGGACTGTGGCGCTCTTTATTGGTCTAAAAGCTCTCGGCATCAGGAACGGAGAGAAGGTTGTAATACCCGCTATGAGC
TTTATGGCTACTATTGACGCGGTTCTGCTCGCGGGGGGAATACCAGTAGTCGTTGACGTTGACGAGTACTACACTATGGA
CGTCAACCAGCTGGAAGACGCGGTAAAGAAGTACAGACCGAGGGTAGTAATTCCCGTTCACCTTTACGGTCAACCTGCGG
ACATGGAAAATATTATGTTTTTAGCGGACAGGTACGGGTTTTTTGTATTAGAGGACTGCGCTCAGGCTCACGGTGCGGAG
TTCAAGGGCAAAAAAGTAGGAGCGTGGGGACACCTTTCTGCCTTCAGCTTTTACGCTTCAAAAAACGTGCCGATGGGAGA
GGGTGGAGCTTTAACAACAAACGACGAAAGCCTTTTTAAAGAAGTTAAGAAGTGGATAGACTTCGGAGAACACCCCGCTT
TTAACGTGAAAATTACGGAATTTCAGGCAGCCATAGGAACGCTACAACTCCGAAAGTTAAAAGAGAGAAACGAAAGGAGG
AGGAACATAGCAAGGATTTACACGGAAAACCTAAAGGGCTTGTGTGAGGTTCCGGAAGAAAGGGAAGGTGCTTACCACGT
TTACCACCTGTATACTTTAAGACACAAAGAAAGGGATAGATTGGTTGAGCACTTGAGAAGTAAGGGAATAGACGCGAGGG
TTTATTACACTTACCTCCTTCACGAACTCAGGAACGCGGAAGCTCTTCCCACCCCGAAGGCAGAAAGGTTCAAAAGAGAA
GTTTTTTCAATACCAGTTCACCCTTTCTTGAAGGAGGAAGAAGTTCTCTACATAATAGAGAGTTTGAAAGAGGTTCTGTA
A

Upstream 100 bases:

>100_bases
CCTTTTCTTTTAAGTCGAGTTTTTTGATTTCCTTTACGTAGAATTCCTCGGGTTTTTCCTTTATCCTTATATCCATCACT
AAGATTAAAATACCTTTTTT

Downstream 100 bases:

>100_bases
AAAATATCTTTAATTATCATGGAGCAAAAGAACGTAAGGAATTTCTGCATAATAGCACACGTTGACCACGGAAAGAGCAC
ACTCGCGGACAGGCTCCTTG

Product: DegT/DnrJ/Eryc1 family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 346; Mature: 346

Protein sequence:

>346_residues
MKIPIIGLEFSEEEKKALTEILESKRITRDGWTDTFQEAFAEFLNVKYCATVCSGTVALFIGLKALGIRNGEKVVIPAMS
FMATIDAVLLAGGIPVVVDVDEYYTMDVNQLEDAVKKYRPRVVIPVHLYGQPADMENIMFLADRYGFFVLEDCAQAHGAE
FKGKKVGAWGHLSAFSFYASKNVPMGEGGALTTNDESLFKEVKKWIDFGEHPAFNVKITEFQAAIGTLQLRKLKERNERR
RNIARIYTENLKGLCEVPEEREGAYHVYHLYTLRHKERDRLVEHLRSKGIDARVYYTYLLHELRNAEALPTPKAERFKRE
VFSIPVHPFLKEEEVLYIIESLKEVL

Sequences:

>Translated_346_residues
MKIPIIGLEFSEEEKKALTEILESKRITRDGWTDTFQEAFAEFLNVKYCATVCSGTVALFIGLKALGIRNGEKVVIPAMS
FMATIDAVLLAGGIPVVVDVDEYYTMDVNQLEDAVKKYRPRVVIPVHLYGQPADMENIMFLADRYGFFVLEDCAQAHGAE
FKGKKVGAWGHLSAFSFYASKNVPMGEGGALTTNDESLFKEVKKWIDFGEHPAFNVKITEFQAAIGTLQLRKLKERNERR
RNIARIYTENLKGLCEVPEEREGAYHVYHLYTLRHKERDRLVEHLRSKGIDARVYYTYLLHELRNAEALPTPKAERFKRE
VFSIPVHPFLKEEEVLYIIESLKEVL
>Mature_346_residues
MKIPIIGLEFSEEEKKALTEILESKRITRDGWTDTFQEAFAEFLNVKYCATVCSGTVALFIGLKALGIRNGEKVVIPAMS
FMATIDAVLLAGGIPVVVDVDEYYTMDVNQLEDAVKKYRPRVVIPVHLYGQPADMENIMFLADRYGFFVLEDCAQAHGAE
FKGKKVGAWGHLSAFSFYASKNVPMGEGGALTTNDESLFKEVKKWIDFGEHPAFNVKITEFQAAIGTLQLRKLKERNERR
RNIARIYTENLKGLCEVPEEREGAYHVYHLYTLRHKERDRLVEHLRSKGIDARVYYTYLLHELRNAEALPTPKAERFKRE
VFSIPVHPFLKEEEVLYIIESLKEVL

Specific function: May form, with dnrI, a two-component regulatory system for daunorubicin biosynthesis genes. This protein probably acts as a sensor protein [H]

COG id: COG0399

COG function: function code M; Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the degT/dnrJ/eryC1 family [H]

Homologues:

Organism=Escherichia coli, GI145693159, Length=363, Percent_Identity=30.8539944903581, Blast_Score=164, Evalue=7e-42,
Organism=Escherichia coli, GI2367285, Length=327, Percent_Identity=26.9113149847095, Blast_Score=110, Evalue=2e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000653
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR015422 [H]

Pfam domain/function: PF01041 DegT_DnrJ_EryC1 [H]

EC number: NA

Molecular weight: Translated: 39589; Mature: 39589

Theoretical pI: Translated: 6.68; Mature: 6.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIPIIGLEFSEEEKKALTEILESKRITRDGWTDTFQEAFAEFLNVKYCATVCSGTVALF
CCCEEEECCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IGLKALGIRNGEKVVIPAMSFMATIDAVLLAGGIPVVVDVDEYYTMDVNQLEDAVKKYRP
HHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHCCCEEEEECCCCEECCHHHHHHHHHHHCC
RVVIPVHLYGQPADMENIMFLADRYGFFVLEDCAQAHGAEFKGKKVGAWGHLSAFSFYAS
CEEEEEEECCCCCCHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHC
KNVPMGEGGALTTNDESLFKEVKKWIDFGEHPAFNVKITEFQAAIGTLQLRKLKERNERR
CCCCCCCCCEEECCCHHHHHHHHHHHCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHH
RNIARIYTENLKGLCEVPEEREGAYHVYHLYTLRHKERDRLVEHLRSKGIDARVYYTYLL
HHHHHHHHHHCHHHHCCCCCCCCCEEEEEEEEHHHHHHHHHHHHHHHCCCCHHHHHHHHH
HELRNAEALPTPKAERFKREVFSIPVHPFLKEEEVLYIIESLKEVL
HHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHC
>Mature Secondary Structure
MKIPIIGLEFSEEEKKALTEILESKRITRDGWTDTFQEAFAEFLNVKYCATVCSGTVALF
CCCEEEECCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IGLKALGIRNGEKVVIPAMSFMATIDAVLLAGGIPVVVDVDEYYTMDVNQLEDAVKKYRP
HHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHCCCEEEEECCCCEECCHHHHHHHHHHHCC
RVVIPVHLYGQPADMENIMFLADRYGFFVLEDCAQAHGAEFKGKKVGAWGHLSAFSFYAS
CEEEEEEECCCCCCHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHC
KNVPMGEGGALTTNDESLFKEVKKWIDFGEHPAFNVKITEFQAAIGTLQLRKLKERNERR
CCCCCCCCCEEECCCHHHHHHHHHHHCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHH
RNIARIYTENLKGLCEVPEEREGAYHVYHLYTLRHKERDRLVEHLRSKGIDARVYYTYLL
HHHHHHHHHHCHHHHCCCCCCCCCEEEEEEEEHHHHHHHHHHHHHHHCCCCHHHHHHHHH
HELRNAEALPTPKAERFKREVFSIPVHPFLKEEEVLYIIESLKEVL
HHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1729206 [H]