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The map label for this gene is dplF

Identifier: 15606784

GI number: 15606784

Start: 1189596

End: 1190183

Strand: Direct

Name: dplF

Synonym: aq_1693

Alternate gene names: NA

Gene position: 1189596-1190183 (Clockwise)

Preceding gene: 15606783

Following gene: 15606793

Centisome position: 76.68

GC content: 42.01

Gene sequence:

>588_bases
ATGGAAGAAAAGAAAGAGGATAAGTTTATCCTTCTAAAAAACCTCTACGAAGAGTGGAAAGACTGCACGAGGTGTGACCT
TCACAAGAGCAGAACAAGAGTAGTTCCCGGAGACGGGAATCCTTACAGTCTTCTAGTCTTTGTGGGAGAGGCACCTGGTG
AGGAAGAAGACAGACAGGGAAAACCTTTTGTAGGGAGAGCCGGGCAACTTTTGAATAGACTCATAGAGGAAGTTCTTGGA
ATGAAAAGGGAAGATGTTTACATAACGAATGTGTGCAAGTGCAGACCTCCCCAAAACAGAAAGCCAACGCCTATAGAAAT
GAGGGCATGTTTCCCTTACTTAAAAAAGGAAATTGAAATAATACAGCCTAAAGTTATTTGCTGTCTCGGAGCTACAGCAG
GTGAAGGAATTCTAGGAAAGAGCTTAAGAATTACTAAAGTGAGAGGGCAGGTATTCCCTTATCCATACAATCCGAGGATA
AAAGTCTTCTTAACTTACCACCCTGCCTACGTCCTTAGAAATCCGAAGGAAGAAACCACGATAATAAAGGACTTTGAAAA
ACTCAAAGAACTCCTCACTCAAGAATAG

Upstream 100 bases:

>100_bases
TCGAGGAAGAAGAGGTAGAGGTTTTCGAGTAATGGGACTGAAGGAAACGATAAAAGCCCTGGAAAGCATAGGGATAACGG
AAATATACTTAAACAGGAAA

Downstream 100 bases:

>100_bases
TTATTACCGAGTTCTTCTTCAGTTCCTTTAATAACTTTTCATACTCCTCCTGGAATTTTTTGGCGAGGATTTTCCTCTTG
AGTTCCTCCTCGTTTACTCC

Product: N-terminus of phage SPO1 DNA polymerase

Products: diphosphate; DNAn+1

Alternate protein names: Uracil-DNA Glycosylase; Phage SPO1 DNA Polymerase-Like Protein; DNA Polymerase; DNA Polymerase Bacteriophage-Type; Uracil DNA Glycosylase Superfamily Protein; DNA-Directed DNA Polymerase; Phage Spo1 DNA Polymerase-Related Protein; Uracil-DNA Glycosylase Family 4 Protein; DNA Polymerase-Related Protein Bacteriophage-Type; Phage DNA Polymerase; DNA Polymerase-Related Protein; Bacteriophage-Type DNA Polymerase N-Terminal Domain Protein; Bacteriophage-Related DNA Polymerase; DNA Polymerase Related Protein; Phage SPO1 DNA Polymerase Domain-Containing Protein; Uracil-DNA Glycosylase Superfamily Protein; Phage Shock Protein E; C-Terminal Part Of DNA Polymerase Bacteriophage-Type; Phage Spo1 DNA Polymerase Domain Protein; Phage Related DNA Polymerase; Uracil-DNA Glycosylase-Like Protein; DNA Glycosylase; Uracil-DNA Glycosylase-Related Protein; Phage SpO1 DNA Polymerase-Related Protein; N-Terminus Of Phage SPO1 DNA Polymerase; Uracil DNA Glycosylase; DNA-Directed DNA Polymerase Bacteriophage-Type; Phage DNA Polymerase-Related Protein

Number of amino acids: Translated: 195; Mature: 195

Protein sequence:

>195_residues
MEEKKEDKFILLKNLYEEWKDCTRCDLHKSRTRVVPGDGNPYSLLVFVGEAPGEEEDRQGKPFVGRAGQLLNRLIEEVLG
MKREDVYITNVCKCRPPQNRKPTPIEMRACFPYLKKEIEIIQPKVICCLGATAGEGILGKSLRITKVRGQVFPYPYNPRI
KVFLTYHPAYVLRNPKEETTIIKDFEKLKELLTQE

Sequences:

>Translated_195_residues
MEEKKEDKFILLKNLYEEWKDCTRCDLHKSRTRVVPGDGNPYSLLVFVGEAPGEEEDRQGKPFVGRAGQLLNRLIEEVLG
MKREDVYITNVCKCRPPQNRKPTPIEMRACFPYLKKEIEIIQPKVICCLGATAGEGILGKSLRITKVRGQVFPYPYNPRI
KVFLTYHPAYVLRNPKEETTIIKDFEKLKELLTQE
>Mature_195_residues
MEEKKEDKFILLKNLYEEWKDCTRCDLHKSRTRVVPGDGNPYSLLVFVGEAPGEEEDRQGKPFVGRAGQLLNRLIEEVLG
MKREDVYITNVCKCRPPQNRKPTPIEMRACFPYLKKEIEIIQPKVICCLGATAGEGILGKSLRITKVRGQVFPYPYNPRI
KVFLTYHPAYVLRNPKEETTIIKDFEKLKELLTQE

Specific function: Unknown

COG id: COG1573

COG function: function code L; Uracil-DNA glycosylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 2.7.7.7

Molecular weight: Translated: 22572; Mature: 22572

Theoretical pI: Translated: 8.83; Mature: 8.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.6 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
3.6 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEEKKEDKFILLKNLYEEWKDCTRCDLHKSRTRVVPGDGNPYSLLVFVGEAPGEEEDRQG
CCCCCCCCEEHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCEEEEEEEECCCCCCCCCCC
KPFVGRAGQLLNRLIEEVLGMKREDVYITNVCKCRPPQNRKPTPIEMRACFPYLKKEIEI
CCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHH
IQPKVICCLGATAGEGILGKSLRITKVRGQVFPYPYNPRIKVFLTYHPAYVLRNPKEETT
HCCEEEEEECCCCCCCCCCCCEEEEEECCEECCCCCCCCEEEEEEECCEEEECCCCHHHH
IIKDFEKLKELLTQE
HHHHHHHHHHHHCCC
>Mature Secondary Structure
MEEKKEDKFILLKNLYEEWKDCTRCDLHKSRTRVVPGDGNPYSLLVFVGEAPGEEEDRQG
CCCCCCCCEEHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCEEEEEEEECCCCCCCCCCC
KPFVGRAGQLLNRLIEEVLGMKREDVYITNVCKCRPPQNRKPTPIEMRACFPYLKKEIEI
CCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHH
IQPKVICCLGATAGEGILGKSLRITKVRGQVFPYPYNPRIKVFLTYHPAYVLRNPKEETT
HCCEEEEEECCCCCCCCCCCCEEEEEECCEECCCCCCCCEEEEEEECCEEEECCCCHHHH
IIKDFEKLKELLTQE
HHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: deoxynucleoside triphosphate; DNAn

Specific reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1)

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA