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The map label for this gene is yrdA [H]

Identifier: 15606762

GI number: 15606762

Start: 1162147

End: 1162665

Strand: Direct

Name: yrdA [H]

Synonym: aq_1660

Alternate gene names: 15606762

Gene position: 1162147-1162665 (Clockwise)

Preceding gene: 15606758

Following gene: 15606764

Centisome position: 74.91

GC content: 45.47

Gene sequence:

>519_bases
ATGGCGATAATTAAACCCTACAAAGGGAAGTACCCTAAAATACACGAAAGTGTTTACCTTTCCGAGAACGTCGTAGTAAT
TGGAGACGTGGAGATAGGAGAGGACTCAAGTATCTGGTTCGGGAGCGTGGTTCGGGGAGACGTCAATTACATAAGGATAG
GGAAAAGGACGAACATTCAGGACAACTGCGTGGTTCACGTGACTCACGACACACACCCTACGATAATAGGAGACAACGTC
ACGATAGGACACAGAGTAGTTCTACACGGTTGCGTACTTCACAACAACATACTCGTGGGAATGGGAGCGGTTGTTATGGA
CGGTGTAGAGATAGAAGATTACGTAATTGTGGGAGCGGGAGCACTCGTCACTCCAAATAAAAAAATACCTTCCGGCGTTC
TCGTTGCAGGTGTTCCTGCAAAGATAGTGAGGGATTTGAGAGAAGAGGAGATAAAACTCATAGAAGAGTCCGCCCAGAAC
TACGTGAATTACAAGAATGAGTACTTAAGAAGTGCTTAA

Upstream 100 bases:

>100_bases
TTCCAGTTCCTCTTTTTTTACTATCCTTTCCGCTCCCGAGACGTGCTTTCCGTTTTTCTGTGCCCGCATTCTTACACTGA
AAAGATCCATAATTTTAAAT

Downstream 100 bases:

>100_bases
GGTTCTTTTCCTTTCCTTTATCACGTCCTCGTAAGCCCACTTCTTGAGTATCTTTTGAATTTCTTCTTCCGAAAGGGAAG
GCCTTGAGTACATACCCTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 172; Mature: 171

Protein sequence:

>172_residues
MAIIKPYKGKYPKIHESVYLSENVVVIGDVEIGEDSSIWFGSVVRGDVNYIRIGKRTNIQDNCVVHVTHDTHPTIIGDNV
TIGHRVVLHGCVLHNNILVGMGAVVMDGVEIEDYVIVGAGALVTPNKKIPSGVLVAGVPAKIVRDLREEEIKLIEESAQN
YVNYKNEYLRSA

Sequences:

>Translated_172_residues
MAIIKPYKGKYPKIHESVYLSENVVVIGDVEIGEDSSIWFGSVVRGDVNYIRIGKRTNIQDNCVVHVTHDTHPTIIGDNV
TIGHRVVLHGCVLHNNILVGMGAVVMDGVEIEDYVIVGAGALVTPNKKIPSGVLVAGVPAKIVRDLREEEIKLIEESAQN
YVNYKNEYLRSA
>Mature_171_residues
AIIKPYKGKYPKIHESVYLSENVVVIGDVEIGEDSSIWFGSVVRGDVNYIRIGKRTNIQDNCVVHVTHDTHPTIIGDNVT
IGHRVVLHGCVLHNNILVGMGAVVMDGVEIEDYVIVGAGALVTPNKKIPSGVLVAGVPAKIVRDLREEEIKLIEESAQNY
VNYKNEYLRSA

Specific function: Unknown

COG id: COG0663

COG function: function code R; Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gamma-class carbonic anhydrase family [H]

Homologues:

Organism=Escherichia coli, GI87082240, Length=173, Percent_Identity=47.3988439306358, Blast_Score=172, Evalue=7e-45,
Organism=Escherichia coli, GI1787667, Length=153, Percent_Identity=38.562091503268, Blast_Score=111, Evalue=2e-26,
Organism=Escherichia coli, GI87081681, Length=155, Percent_Identity=34.1935483870968, Blast_Score=95, Evalue=3e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011004 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18901; Mature: 18770

Theoretical pI: Translated: 6.39; Mature: 6.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAIIKPYKGKYPKIHESVYLSENVVVIGDVEIGEDSSIWFGSVVRGDVNYIRIGKRTNIQ
CCEECCCCCCCCCCCCEEEECCCEEEEEEEEECCCCCEEEEEEEECCCCEEEECCCCCCC
DNCVVHVTHDTHPTIIGDNVTIGHRVVLHGCVLHNNILVGMGAVVMDGVEIEDYVIVGAG
CCEEEEEECCCCCEEEECCEEECCEEEEEEEHHHCCEEEECCHHHCCCCEECCEEEECCC
ALVTPNKKIPSGVLVAGVPAKIVRDLREEEIKLIEESAQNYVNYKNEYLRSA
EEECCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
AIIKPYKGKYPKIHESVYLSENVVVIGDVEIGEDSSIWFGSVVRGDVNYIRIGKRTNIQ
CEECCCCCCCCCCCCEEEECCCEEEEEEEEECCCCCEEEEEEEECCCCEEEECCCCCCC
DNCVVHVTHDTHPTIIGDNVTIGHRVVLHGCVLHNNILVGMGAVVMDGVEIEDYVIVGAG
CCEEEEEECCCCCEEEECCEEECCEEEEEEEHHHCCEEEECCHHHCCCCEECCEEEECCC
ALVTPNKKIPSGVLVAGVPAKIVRDLREEEIKLIEESAQNYVNYKNEYLRSA
EEECCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503; 10493123 [H]