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The map label for this gene is glpC [C]

Identifier: 15606743

GI number: 15606743

Start: 1150163

End: 1151350

Strand: Direct

Name: glpC [C]

Synonym: aq_1639

Alternate gene names: 15606743

Gene position: 1150163-1151350 (Clockwise)

Preceding gene: 15606740

Following gene: 15606745

Centisome position: 74.14

GC content: 44.87

Gene sequence:

>1188_bases
ATGAGTATGGAAAAATTCGAGTTTCCCATAGACCTTGCCGAGAAATGCGTAAAGTGCGGACTCTGTAAATCGGTGTGCCC
CACTTACCCCTTCAAAGAGGAAGAAGGAGCCTTTGCAAGGGGAAGACTCGCCCTTGCGGAAATGGTTGTAAAAGGCGAAC
TCCCTTTAACCAAGGAAGTCGTAGCCCAGTGGAATGAGTGTGCAATGTGTAGAAGGTGTGAGTGGATATGTCCAAACGAC
GTTCAGTACAAGGAGATAATGGTTCACGCAAGAGAAATCCAAAGGAAGGAAACGGAAAGGGATTTCATATCGGAGGCCGG
ATTAAAAAGTCTGGAATTTATGCAGTCAAAACCAGGAAGAGTTGCGTTAAAAATTGCGGGAATACTTTCTAAACCTCTTC
CCAAAGAGATAAAAGTTCCTCTCCCCACGGGAGGAGTTAAGTTCTTTCCCAAACCCTATGGAAAGCCTTTCGGTATAAGG
GGAAAGACTTTTAGAGCCAAGAATGAGAAGATGAAGCTCCTCTTCTTTACGGGATGTATGATAGACGTCTTTTACGGAAA
GACGGGAGAGAACGTAATAAAGGTTTTGAATAAACTCGGTTATACGGTAATTGTTCCAAAGGACATAAAGTGCTGTGGTG
CACCCCACCTTTACCACGGAAACACGGAGGCTTTTGAGAAGTTAAAGGAACACAACTTAAAGGAAATTGAGAAGTACGAG
TACGACGCTCTTGTTGTTGCGTGCCCAACCTGCGGAGGAGCTCTGAAGGAAGACTACGGAAAGGACTGGAAGGTTTTCAG
CTTTACTGAGATAATAGCGAATGAAGACATTGAGTTTAAAGGAAAAGGTGAGAAAGTTACCGTTCACGTTCCCTGCCACT
ACTACACTGCCATGAAGTTAAATCCGAACAACTTCTACAAAGCCCTCGGAAAGGTAAAAAACGCGGAGACGGTTAAAGCG
GAAAAGGCTCAGAGTTGTTGCGGATTTGCAGGACTCTTCTCAATAAAGAACCCTGAGCTCTCGGAAGAAATCCAAAGGGA
AAAGATGCTTGACTTTAAAAAGACTGAGGCGGACTACGTAGTTACGGAGTGCCCGGGATGCGTTCTACAACTGAGAGACG
GCGTGAAGAAGTTCAAAAACCAACAGGAAGTAAAGCACATAGCTGATTACCTGGGTGAGAGGATTTAG

Upstream 100 bases:

>100_bases
TTCACTCCTTAAGAAGTTTTCTTTAAAATCTCTATGAGATATACACTCCTTTCTATAAGAAATTTTTATCATAGAATAAG
CTATACCTAACCCTAAAATC

Downstream 100 bases:

>100_bases
TAGACTTTTATCATATGAAGATACTCTTCTACGCACCGAACTTTACACGCCCTCTGAAAAATGGTACAGCTTCTACAATT
TTAGCATCAATGTGGGCTAA

Product: oxido/reductase iron sulfur protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 395; Mature: 394

Protein sequence:

>395_residues
MSMEKFEFPIDLAEKCVKCGLCKSVCPTYPFKEEEGAFARGRLALAEMVVKGELPLTKEVVAQWNECAMCRRCEWICPND
VQYKEIMVHAREIQRKETERDFISEAGLKSLEFMQSKPGRVALKIAGILSKPLPKEIKVPLPTGGVKFFPKPYGKPFGIR
GKTFRAKNEKMKLLFFTGCMIDVFYGKTGENVIKVLNKLGYTVIVPKDIKCCGAPHLYHGNTEAFEKLKEHNLKEIEKYE
YDALVVACPTCGGALKEDYGKDWKVFSFTEIIANEDIEFKGKGEKVTVHVPCHYYTAMKLNPNNFYKALGKVKNAETVKA
EKAQSCCGFAGLFSIKNPELSEEIQREKMLDFKKTEADYVVTECPGCVLQLRDGVKKFKNQQEVKHIADYLGERI

Sequences:

>Translated_395_residues
MSMEKFEFPIDLAEKCVKCGLCKSVCPTYPFKEEEGAFARGRLALAEMVVKGELPLTKEVVAQWNECAMCRRCEWICPND
VQYKEIMVHAREIQRKETERDFISEAGLKSLEFMQSKPGRVALKIAGILSKPLPKEIKVPLPTGGVKFFPKPYGKPFGIR
GKTFRAKNEKMKLLFFTGCMIDVFYGKTGENVIKVLNKLGYTVIVPKDIKCCGAPHLYHGNTEAFEKLKEHNLKEIEKYE
YDALVVACPTCGGALKEDYGKDWKVFSFTEIIANEDIEFKGKGEKVTVHVPCHYYTAMKLNPNNFYKALGKVKNAETVKA
EKAQSCCGFAGLFSIKNPELSEEIQREKMLDFKKTEADYVVTECPGCVLQLRDGVKKFKNQQEVKHIADYLGERI
>Mature_394_residues
SMEKFEFPIDLAEKCVKCGLCKSVCPTYPFKEEEGAFARGRLALAEMVVKGELPLTKEVVAQWNECAMCRRCEWICPNDV
QYKEIMVHAREIQRKETERDFISEAGLKSLEFMQSKPGRVALKIAGILSKPLPKEIKVPLPTGGVKFFPKPYGKPFGIRG
KTFRAKNEKMKLLFFTGCMIDVFYGKTGENVIKVLNKLGYTVIVPKDIKCCGAPHLYHGNTEAFEKLKEHNLKEIEKYEY
DALVVACPTCGGALKEDYGKDWKVFSFTEIIANEDIEFKGKGEKVTVHVPCHYYTAMKLNPNNFYKALGKVKNAETVKAE
KAQSCCGFAGLFSIKNPELSEEIQREKMLDFKKTEADYVVTECPGCVLQLRDGVKKFKNQQEVKHIADYLGERI

Specific function: Unknown

COG id: COG0247

COG function: function code C; Fe-S oxidoreductase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]

Homologues:

Organism=Escherichia coli, GI48994913, Length=381, Percent_Identity=26.7716535433071, Blast_Score=122, Evalue=3e-29,
Organism=Escherichia coli, GI1788576, Length=394, Percent_Identity=25.3807106598985, Blast_Score=99, Evalue=3e-22,
Organism=Escherichia coli, GI1786497, Length=243, Percent_Identity=25.1028806584362, Blast_Score=70, Evalue=3e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006058
- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR012675
- InterPro:   IPR004017
- InterPro:   IPR001041
- InterPro:   IPR012285
- InterPro:   IPR009051
- InterPro:   IPR004489 [H]

Pfam domain/function: PF02754 CCG; PF00111 Fer2 [H]

EC number: NA

Molecular weight: Translated: 44802; Mature: 44671

Theoretical pI: Translated: 8.50; Mature: 8.50

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.6 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
7.1 %Cys+Met (Translated Protein)
4.6 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
6.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSMEKFEFPIDLAEKCVKCGLCKSVCPTYPFKEEEGAFARGRLALAEMVVKGELPLTKEV
CCCCCCCCCHHHHHHHHHHCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHH
VAQWNECAMCRRCEWICPNDVQYKEIMVHAREIQRKETERDFISEAGLKSLEFMQSKPGR
HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCE
VALKIAGILSKPLPKEIKVPLPTGGVKFFPKPYGKPFGIRGKTFRAKNEKMKLLFFTGCM
EEEEEEHHHCCCCCCCCEECCCCCCCEECCCCCCCCCCCCCCEEECCCCCEEEEEEECCE
IDVFYGKTGENVIKVLNKLGYTVIVPKDIKCCGAPHLYHGNTEAFEKLKEHNLKEIEKYE
EEEEECCCCHHHHHHHHHCCCEEEECCCCHHCCCCCEECCCHHHHHHHHHCCHHHHHHHC
YDALVVACPTCGGALKEDYGKDWKVFSFTEIIANEDIEFKGKGEKVTVHVPCHYYTAMKL
CCEEEEECCCCCCHHHHHCCCCCEEEEHHHHHHCCCCEEECCCCEEEEEECCEEEEEEEE
NPNNFYKALGKVKNAETVKAEKAQSCCGFAGLFSIKNPELSEEIQREKMLDFKKTEADYV
CHHHHHHHHHHCCCCHHHHHHHHHHHHCHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCEE
VTECPGCVLQLRDGVKKFKNQQEVKHIADYLGERI
EECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SMEKFEFPIDLAEKCVKCGLCKSVCPTYPFKEEEGAFARGRLALAEMVVKGELPLTKEV
CCCCCCCCHHHHHHHHHHCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHH
VAQWNECAMCRRCEWICPNDVQYKEIMVHAREIQRKETERDFISEAGLKSLEFMQSKPGR
HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCE
VALKIAGILSKPLPKEIKVPLPTGGVKFFPKPYGKPFGIRGKTFRAKNEKMKLLFFTGCM
EEEEEEHHHCCCCCCCCEECCCCCCCEECCCCCCCCCCCCCCEEECCCCCEEEEEEECCE
IDVFYGKTGENVIKVLNKLGYTVIVPKDIKCCGAPHLYHGNTEAFEKLKEHNLKEIEKYE
EEEEECCCCHHHHHHHHHCCCEEEECCCCHHCCCCCEECCCHHHHHHHHHCCHHHHHHHC
YDALVVACPTCGGALKEDYGKDWKVFSFTEIIANEDIEFKGKGEKVTVHVPCHYYTAMKL
CCEEEEECCCCCCHHHHHCCCCCEEEEHHHHHHCCCCEEECCCCEEEEEECCEEEEEEEE
NPNNFYKALGKVKNAETVKAEKAQSCCGFAGLFSIKNPELSEEIQREKMLDFKKTEADYV
CHHHHHHHHHHCCCCHHHHHHHHHHHHCHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCEE
VTECPGCVLQLRDGVKKFKNQQEVKHIADYLGERI
EECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA