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The map label for this gene is ppdD3

Identifier: 15606611

GI number: 15606611

Start: 1020672

End: 1021103

Strand: Direct

Name: ppdD3

Synonym: aq_1435

Alternate gene names: NA

Gene position: 1020672-1021103 (Clockwise)

Preceding gene: 15606610

Following gene: 15606612

Centisome position: 65.79

GC content: 43.75

Gene sequence:

>432_bases
ATGGGGAAGCTTCTGTATTTCAAAAGATGGAATGTCGTACAAGGTTATAGTAAACAGGGAAGGTATAAGGGTAGAAAAAG
GAGGAACGTGTTGAAAAAAGGATTTACACTGATAGAGGTTCTCGTAGCATTGCTCGTTTTTATAATCGGCGTGGGGAGTA
TATTCTACGTTTTTTCTAAATTTTCCGATTTAATGAGAAACAGGTTCGTAATTACGTGTGTGACCGAAGCCGCGTATTAT
GCATTGGATGCCTGTGCGGCGGGAGCGGCACCGCCCGGATCGTTGACGTGCGGAAATATAACAGTTGACATTAGTGTAAG
CGGCTGTGAACCTTCACCGGGAGCTTGCAGGAACGTTTCCGTAACCGCCTCTTACAATACTATTAGCTTTTCTTTAACTA
CGAAAAAGTGTGACTTAGGAGCTTCGCCATGA

Upstream 100 bases:

>100_bases
TAGACAACTCCTCCTGTACTCCCGTGGCTTCTTACAGATTTGAGTTTAACTTGGATTCGACCAGATCTGTGACTTTCAGT
CCGAGGGGCTTGGCACATTC

Downstream 100 bases:

>100_bases
ACAGGGGAATGACGCTTATAGAATTACTCGTAGCTCTTGCACTTTCTATAATTCTCTCCCTTGGACTCTACTACTCTTTC
CGTTATTCGGGAATATTTTT

Product: pilin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 143; Mature: 142

Protein sequence:

>143_residues
MGKLLYFKRWNVVQGYSKQGRYKGRKRRNVLKKGFTLIEVLVALLVFIIGVGSIFYVFSKFSDLMRNRFVITCVTEAAYY
ALDACAAGAAPPGSLTCGNITVDISVSGCEPSPGACRNVSVTASYNTISFSLTTKKCDLGASP

Sequences:

>Translated_143_residues
MGKLLYFKRWNVVQGYSKQGRYKGRKRRNVLKKGFTLIEVLVALLVFIIGVGSIFYVFSKFSDLMRNRFVITCVTEAAYY
ALDACAAGAAPPGSLTCGNITVDISVSGCEPSPGACRNVSVTASYNTISFSLTTKKCDLGASP
>Mature_142_residues
GKLLYFKRWNVVQGYSKQGRYKGRKRRNVLKKGFTLIEVLVALLVFIIGVGSIFYVFSKFSDLMRNRFVITCVTEAAYYA
LDACAAGAAPPGSLTCGNITVDISVSGCEPSPGACRNVSVTASYNTISFSLTTKKCDLGASP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15498; Mature: 15367

Theoretical pI: Translated: 9.96; Mature: 9.96

Prosite motif: PS00409 PROKAR_NTER_METHYL

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.2 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
4.2 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGKLLYFKRWNVVQGYSKQGRYKGRKRRNVLKKGFTLIEVLVALLVFIIGVGSIFYVFSK
CCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHH
FSDLMRNRFVITCVTEAAYYALDACAAGAAPPGSLTCGNITVDISVSGCEPSPGACRNVS
HHHHHHCCEEEEEEHHHHHHHHHHHHCCCCCCCCEEECCEEEEEEEECCCCCCCCCCCEE
VTASYNTISFSLTTKKCDLGASP
EEEECCEEEEEEEECCCCCCCCC
>Mature Secondary Structure 
GKLLYFKRWNVVQGYSKQGRYKGRKRRNVLKKGFTLIEVLVALLVFIIGVGSIFYVFSK
CCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHH
FSDLMRNRFVITCVTEAAYYALDACAAGAAPPGSLTCGNITVDISVSGCEPSPGACRNVS
HHHHHHCCEEEEEEHHHHHHHHHHHHCCCCCCCCEEECCEEEEEEEECCCCCCCCCCCEE
VTASYNTISFSLTTKKCDLGASP
EEEECCEEEEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA