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The map label for this gene is ppdD1 [C]

Identifier: 15606608

GI number: 15606608

Start: 1019553

End: 1019915

Strand: Direct

Name: ppdD1 [C]

Synonym: aq_1432

Alternate gene names: 15606608

Gene position: 1019553-1019915 (Clockwise)

Preceding gene: 15606606

Following gene: 15606609

Centisome position: 65.72

GC content: 45.45

Gene sequence:

>363_bases
ATGAGTCAAGTTACTCAATCTTTCAGAAAAAGTCTCAGCCTCAACAAAGGTTTTACCTTGATTGAACTCCTGATCGTCAT
CGCGATCATCGCAATCCTTGCAACCATGGCCATTCCCAAAATTCAGGAGTACAGAAGGGCTGCACTCATAGGTAAGCTCA
CGAATAATGCGAGATTGTGCCTATCAGCATATGCACAACAAGAAGCTGTTAGTGGAGTAACCGGAGCTGTATCCGTTACC
GCCAACGTACCGCCGGGATGTACAGGAGACGCATCATCGTGTACATGCAGTGAAGGAGGTGTTTCTGTAACTTGTTCCGT
ACAAAACGATGGTAGTATAACCTGCAGTGAAAGTACTTCCTAA

Upstream 100 bases:

>100_bases
AGTATATCTCCTATTTTCATAAGGAAGTATTTTAAAGGTGGACTAAGAATTTTTAAGAAATAAAATAAAAAGTGTAAAAA
ACTTTCAAGGGAGGTGTGCC

Downstream 100 bases:

>100_bases
TCTGCTAGGTTGCACCCTTCTTTCTTTTTCCTCTTTTCTTTTAACCTTTATTTATATAGGATTTTTATCATGCCAAAGGA
GGGGGGATTTACTTTAGTAG

Product: pilin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 120; Mature: 119

Protein sequence:

>120_residues
MSQVTQSFRKSLSLNKGFTLIELLIVIAIIAILATMAIPKIQEYRRAALIGKLTNNARLCLSAYAQQEAVSGVTGAVSVT
ANVPPGCTGDASSCTCSEGGVSVTCSVQNDGSITCSESTS

Sequences:

>Translated_120_residues
MSQVTQSFRKSLSLNKGFTLIELLIVIAIIAILATMAIPKIQEYRRAALIGKLTNNARLCLSAYAQQEAVSGVTGAVSVT
ANVPPGCTGDASSCTCSEGGVSVTCSVQNDGSITCSESTS
>Mature_119_residues
SQVTQSFRKSLSLNKGFTLIELLIVIAIIAILATMAIPKIQEYRRAALIGKLTNNARLCLSAYAQQEAVSGVTGAVSVTA
NVPPGCTGDASSCTCSEGGVSVTCSVQNDGSITCSESTS

Specific function: Not Yet Known. [C]

COG id: COG2165

COG function: function code NU; Type II secretory pathway, pseudopilin PulG

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12361; Mature: 12230

Theoretical pI: Translated: 7.73; Mature: 7.73

Prosite motif: PS00409 PROKAR_NTER_METHYL

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
6.7 %Cys+Met (Translated Protein)
5.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQVTQSFRKSLSLNKGFTLIELLIVIAIIAILATMAIPKIQEYRRAALIGKLTNNARLC
CCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHH
LSAYAQQEAVSGVTGAVSVTANVPPGCTGDASSCTCSEGGVSVTCSVQNDGSITCSESTS
HHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCEECCCCEEEEEEECCCCCEEECCCCC
>Mature Secondary Structure 
SQVTQSFRKSLSLNKGFTLIELLIVIAIIAILATMAIPKIQEYRRAALIGKLTNNARLC
CHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHH
LSAYAQQEAVSGVTGAVSVTANVPPGCTGDASSCTCSEGGVSVTCSVQNDGSITCSESTS
HHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCEECCCCEEEEEEECCCCCEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA