| Definition | Aquifex aeolicus VF5, complete genome. |
|---|---|
| Accession | NC_000918 |
| Length | 1,551,335 |
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The map label for this gene is yraQ [C]
Identifier: 15606579
GI number: 15606579
Start: 986343
End: 987302
Strand: Direct
Name: yraQ [C]
Synonym: aq_1388
Alternate gene names: 15606579
Gene position: 986343-987302 (Clockwise)
Preceding gene: 15606578
Following gene: 15606581
Centisome position: 63.58
GC content: 43.65
Gene sequence:
>960_bases ATGTTTGAGATTTACGAGAGATTTGCCGACTTAGTGGTTTACAATCTGTTAGGACTGCAGAAGGGCATGCATCTTGCGGA AGCCCTTCATTTTTTTGTTTACGATACTCTGAAGATATTTACCTTGCTTACCGTTATTATTTTCGTTGTTTCCTTTATAA GGAGTTTCTTTCCCCTTGAAAAGACACGGGAAATCCTTTCAAAACACAAAGCGGTGGCGCTTCCCCTTGCCGCTTTCCTC GGCATTTTAACGCCTTTCTGTTCTTGCTCCGCTGTGCCGATGTTTATAGGTTTTGTAGAAGCGGGAATTCCTCTGGGAGC TGCCTTTACATTCCTTGTTGCTTCGCCTATGGTAAACGAAGTGGCTCTCGGTCTTCTTCTAACACTCTTTGGCGTTAAGG TAGCCGTTCTTTACGTGATCTTTGGAGTAATCGTTGCAATAGTAGCGGGCTACGTAATAGAGAAACTAAATCCCAGAGAA CTGATAGCGGATTACGTATTTCAGGTAAAACTCGGCCAAACTCAAATTAAAGAAATGACCTTTAAGGAAAGGCTTGAGTT TGCAAAGAACAACGTCAAAGAAATCCTCGGAAAGATATGGATTTACATAATTATCGCTATAGGGATAGGAGGGTTTATAC ACGGTTACGTTCCACAGGATATAGTGGAAAGAGTGGCGAAAACCGCAGGACTCATAGCCGTTCCGCTGGCCGTACTGATA GGAATTCCCCTCTACTCAAACGCTGCGGGAATACTGCCCGTGATACAGGCTCTAATCGCCAAGGGTGTGCCTCTGGGAAC GGCCCTTGCCTTTATGATGGCTACAACCGCCTTGTCTTTTCCCGAGTTTATGATACTGAAGCAAATCATGAAGCCGAAGT TAATAGCATTTTTTGCGGGAATAGTGGGCATTTCTATAATAGCAGTGGGTTATCTTTTTAACTTTATCTTCACACTCTGA
Upstream 100 bases:
>100_bases GATGACCACTCCTGTTCTGGTCGTGGACGGTGAAGTAAAACACGTGGGCACACCCATACCAGCACCTCAGAAGATAGAAG AGCTTATCGGAGGGTGAGAG
Downstream 100 bases:
>100_bases AGAGTTCCGCCTTCCCTTGGCTTCCGTAAAGCCTTATCCTTTTCTTTACAATATTTTTTACCTCTTCCATGGCGGGTTTT AAGAACTTCCTCGGGTCTAT
Product: hypothetical protein
Products: NA
Alternate protein names: Permease Family Protein; Permease-Like Protein; Integral Membrane Protein; Permease Superfamily
Number of amino acids: Translated: 319; Mature: 319
Protein sequence:
>319_residues MFEIYERFADLVVYNLLGLQKGMHLAEALHFFVYDTLKIFTLLTVIIFVVSFIRSFFPLEKTREILSKHKAVALPLAAFL GILTPFCSCSAVPMFIGFVEAGIPLGAAFTFLVASPMVNEVALGLLLTLFGVKVAVLYVIFGVIVAIVAGYVIEKLNPRE LIADYVFQVKLGQTQIKEMTFKERLEFAKNNVKEILGKIWIYIIIAIGIGGFIHGYVPQDIVERVAKTAGLIAVPLAVLI GIPLYSNAAGILPVIQALIAKGVPLGTALAFMMATTALSFPEFMILKQIMKPKLIAFFAGIVGISIIAVGYLFNFIFTL
Sequences:
>Translated_319_residues MFEIYERFADLVVYNLLGLQKGMHLAEALHFFVYDTLKIFTLLTVIIFVVSFIRSFFPLEKTREILSKHKAVALPLAAFL GILTPFCSCSAVPMFIGFVEAGIPLGAAFTFLVASPMVNEVALGLLLTLFGVKVAVLYVIFGVIVAIVAGYVIEKLNPRE LIADYVFQVKLGQTQIKEMTFKERLEFAKNNVKEILGKIWIYIIIAIGIGGFIHGYVPQDIVERVAKTAGLIAVPLAVLI GIPLYSNAAGILPVIQALIAKGVPLGTALAFMMATTALSFPEFMILKQIMKPKLIAFFAGIVGISIIAVGYLFNFIFTL >Mature_319_residues MFEIYERFADLVVYNLLGLQKGMHLAEALHFFVYDTLKIFTLLTVIIFVVSFIRSFFPLEKTREILSKHKAVALPLAAFL GILTPFCSCSAVPMFIGFVEAGIPLGAAFTFLVASPMVNEVALGLLLTLFGVKVAVLYVIFGVIVAIVAGYVIEKLNPRE LIADYVFQVKLGQTQIKEMTFKERLEFAKNNVKEILGKIWIYIIIAIGIGGFIHGYVPQDIVERVAKTAGLIAVPLAVLI GIPLYSNAAGILPVIQALIAKGVPLGTALAFMMATTALSFPEFMILKQIMKPKLIAFFAGIVGISIIAVGYLFNFIFTL
Specific function: Unknown
COG id: COG0701
COG function: function code R; Predicted permeases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34947; Mature: 34947
Theoretical pI: Translated: 9.40; Mature: 9.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFEIYERFADLVVYNLLGLQKGMHLAEALHFFVYDTLKIFTLLTVIIFVVSFIRSFFPLE CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH KTREILSKHKAVALPLAAFLGILTPFCSCSAVPMFIGFVEAGIPLGAAFTFLVASPMVNE HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH VALGLLLTLFGVKVAVLYVIFGVIVAIVAGYVIEKLNPRELIADYVFQVKLGQTQIKEMT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHH FKERLEFAKNNVKEILGKIWIYIIIAIGIGGFIHGYVPQDIVERVAKTAGLIAVPLAVLI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH GIPLYSNAAGILPVIQALIAKGVPLGTALAFMMATTALSFPEFMILKQIMKPKLIAFFAG HCCHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH IVGISIIAVGYLFNFIFTL HHHHHHHHHHHHHHHHHHC >Mature Secondary Structure MFEIYERFADLVVYNLLGLQKGMHLAEALHFFVYDTLKIFTLLTVIIFVVSFIRSFFPLE CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH KTREILSKHKAVALPLAAFLGILTPFCSCSAVPMFIGFVEAGIPLGAAFTFLVASPMVNE HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH VALGLLLTLFGVKVAVLYVIFGVIVAIVAGYVIEKLNPRELIADYVFQVKLGQTQIKEMT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHH FKERLEFAKNNVKEILGKIWIYIIIAIGIGGFIHGYVPQDIVERVAKTAGLIAVPLAVLI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH GIPLYSNAAGILPVIQALIAKGVPLGTALAFMMATTALSFPEFMILKQIMKPKLIAFFAG HCCHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH IVGISIIAVGYLFNFIFTL HHHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA