| Definition | Aquifex aeolicus VF5, complete genome. |
|---|---|
| Accession | NC_000918 |
| Length | 1,551,335 |
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The map label for this gene is 15606548
Identifier: 15606548
GI number: 15606548
Start: 958754
End: 959560
Strand: Direct
Name: 15606548
Synonym: aq_1349
Alternate gene names: NA
Gene position: 958754-959560 (Clockwise)
Preceding gene: 15606547
Following gene: 15606549
Centisome position: 61.8
GC content: 41.39
Gene sequence:
>807_bases GTGAGCGGATTCTTAATAGCCCTTTTCTGGGTAATTTTTTCTAAGTACGTTTTTGACGTGCTCTTTTTCAGAGAAGCAAA GATTGAAAGGGAAATTTTCGGGAATAAGAACCTTGCACTTTCCCTGTCTTACGCGGGTTACTTTCTGGGACTTGCCTTTT CCTTTTACAGCGTTTACTTTTACGAGAGTCTTTTCAGGGAAGTTCTTTACCTGATTTTCGTGAGCTTTACACTCCTTCTC GGAGTTTACATATTTGACCTCATCTTTTTGAGGAAAATAGACCTGAAAGAAGAAATTCTTAGGGGAAACGCAGGTGCGGG GATCACGCAGGGCATTTACTTTCTTTCCCTCGGTATTTTGATATCCGCTTCCTTCTGGAGAAAGGAGAGCTTCATCCTTT CGGTAATCTACTCCTTAATTTACCTTTCGCTCGGTATGGTTATGCTCTTTATTTCCACGCTTTTAATGTCCAGACTCCTT AAACTTAACTTTGAGGAAGAAGTAAAGAAGGAAAACTTTTCCGCTTCCCTCGTGCTTGGAAGTATAACTCTTGGCGTTTC CGTCGTTTTATACGGTGCGATATCGGGAGAGTTCATGGGAAGCCTTATTTTTGACTTGTTCTCAACTGTCCTTTACTTCG TCGTTTCTCAGGTACTGATGGTGATTTTTTACGTTGTCGTTGAGTTTTTACTGTTCAGGAAAGTTATTCTTTCCTCAGAG GTTTACGAGAATAACCTTAGTGCCTCCCTTATACTGAGTGCTACATTCATAGCGAGTGCCTTCATAACCCTTGCGGTTAT GGGATGA
Upstream 100 bases:
>100_bases GTGGTGGCGGGGGGATAATATTCCTTCCACTGCCCATTCCGTGGGGAGGAGGGTACAATTACGAGGGTAGGTACAGAACT CCGACGGGGAGGTACGGAAA
Downstream 100 bases:
>100_bases GTGTTTCTACAGCTTTAAAGCTCTGTATTTTCTTTACTGGTTTTGCGGGAATAGTTGCCGAGTACTCCCTTGCCACTCTG GCTACTTACCTCCTCGGAAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 268; Mature: 267
Protein sequence:
>268_residues MSGFLIALFWVIFSKYVFDVLFFREAKIEREIFGNKNLALSLSYAGYFLGLAFSFYSVYFYESLFREVLYLIFVSFTLLL GVYIFDLIFLRKIDLKEEILRGNAGAGITQGIYFLSLGILISASFWRKESFILSVIYSLIYLSLGMVMLFISTLLMSRLL KLNFEEEVKKENFSASLVLGSITLGVSVVLYGAISGEFMGSLIFDLFSTVLYFVVSQVLMVIFYVVVEFLLFRKVILSSE VYENNLSASLILSATFIASAFITLAVMG
Sequences:
>Translated_268_residues MSGFLIALFWVIFSKYVFDVLFFREAKIEREIFGNKNLALSLSYAGYFLGLAFSFYSVYFYESLFREVLYLIFVSFTLLL GVYIFDLIFLRKIDLKEEILRGNAGAGITQGIYFLSLGILISASFWRKESFILSVIYSLIYLSLGMVMLFISTLLMSRLL KLNFEEEVKKENFSASLVLGSITLGVSVVLYGAISGEFMGSLIFDLFSTVLYFVVSQVLMVIFYVVVEFLLFRKVILSSE VYENNLSASLILSATFIASAFITLAVMG >Mature_267_residues SGFLIALFWVIFSKYVFDVLFFREAKIEREIFGNKNLALSLSYAGYFLGLAFSFYSVYFYESLFREVLYLIFVSFTLLLG VYIFDLIFLRKIDLKEEILRGNAGAGITQGIYFLSLGILISASFWRKESFILSVIYSLIYLSLGMVMLFISTLLMSRLLK LNFEEEVKKENFSASLVLGSITLGVSVVLYGAISGEFMGSLIFDLFSTVLYFVVSQVLMVIFYVVVEFLLFRKVILSSEV YENNLSASLILSATFIASAFITLAVMG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential)
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0719 family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y1349_AQUAE (O67364)
Other databases:
- EMBL: AE000657 - PIR: A70417 - RefSeq: NP_213928.1 - GeneID: 1192802 - GenomeReviews: AE000657_GR - KEGG: aae:aq_1349 - NMPDR: fig|224324.1.peg.943 - OMA: REMVEND - BioCyc: AAEO224324:AQ_1349-MONOMER - InterPro: IPR007140
Pfam domain/function: PF03994 DUF350
EC number: NA
Molecular weight: Translated: 30388; Mature: 30256
Theoretical pI: Translated: 5.03; Mature: 5.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0xcee7a10)-; HASH(0xd8c6e60)-; HASH(0xdc37444)-; HASH(0xd3b10f0)-; HASH(0xdbd78f8)-; HASH(0xdd5f474)-; HASH(0xd8e4810)-; HASH(0xdb6de1c)-;
Cys/Met content:
0.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGFLIALFWVIFSKYVFDVLFFREAKIEREIFGNKNLALSLSYAGYFLGLAFSFYSVYF CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHH YESLFREVLYLIFVSFTLLLGVYIFDLIFLRKIDLKEEILRGNAGAGITQGIYFLSLGIL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCHHHHHHHHHHHHH ISASFWRKESFILSVIYSLIYLSLGMVMLFISTLLMSRLLKLNFEEEVKKENFSASLVLG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCHHHHHH SITLGVSVVLYGAISGEFMGSLIFDLFSTVLYFVVSQVLMVIFYVVVEFLLFRKVILSSE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VYENNLSASLILSATFIASAFITLAVMG HHHCCCCHHHHHHHHHHHHHHHHHHHCH >Mature Secondary Structure SGFLIALFWVIFSKYVFDVLFFREAKIEREIFGNKNLALSLSYAGYFLGLAFSFYSVYF CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHH YESLFREVLYLIFVSFTLLLGVYIFDLIFLRKIDLKEEILRGNAGAGITQGIYFLSLGIL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCHHHHHHHHHHHHH ISASFWRKESFILSVIYSLIYLSLGMVMLFISTLLMSRLLKLNFEEEVKKENFSASLVLG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCHHHHHH SITLGVSVVLYGAISGEFMGSLIFDLFSTVLYFVVSQVLMVIFYVVVEFLLFRKVILSSE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VYENNLSASLILSATFIASAFITLAVMG HHHCCCCHHHHHHHHHHHHHHHHHHHCH
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9537320