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The map label for this gene is arnT [H]

Identifier: 15606465

GI number: 15606465

Start: 871498

End: 872904

Strand: Direct

Name: arnT [H]

Synonym: aq_1236

Alternate gene names: 15606465

Gene position: 871498-872904 (Clockwise)

Preceding gene: 15606460

Following gene: 15606466

Centisome position: 56.18

GC content: 38.95

Gene sequence:

>1407_bases
ATGTTTTACATACTCATAATTCTTCTGGCTACTTTCTCGATGATACCGAACATAAATGAGTTTGCTTTCAGGTTTGAAGA
AACCACCCGTGCGGTTGTAGCCTTTGAAATGTACCATTCAGGGAATTACTTTCAGCCCACAATTCTCGGAGATCCATACT
ACAACAAACCTCCTCTCTTTAACTGGTTTATTATTATTTCCTCCAAATTTTTCGGGTGGGACATTGTAACTGCAAGGGCA
GTGAGTGTTTTCTTCACCCTTGCAAATGCCTTTCTTATTTACTTTTTTTCTTCGAAAGTCCTGAAAAATAAGGAAAAGGC
TCTACTTTCTTCAGTGTTTTTTATTACCTTTGCTGACGTTTTATTCTGGTACGGGTGGCTTGCGGAAATAGACGTGACTT
TGAGTTTCTTCGTCACTTTGTTGTTTATCCAGATTTACAAACTCTGGGAAGAAGGGAAACCCATTTATTACTACACTTCC
GCGCTTTTGACAGGTTTGATTTTCATGATAAAGGGCTTTCCCGCATTTGCATTTTACGGACTGAGTTTAATTTCCCTGAG
TATTTTTAAAAGGGACTTTAAGGTTCTGCTGAACTTCCACGCTTTTGCTTCCTACTTCCTCGCTTTAATTGCTTCCTTCT
GGTGGCTTCCCTTTTCGGAAAATCCTGAATTTTACTTTAGGAGACTCTGGGAGGAGAGCTTTAGCAGAGTAGAGAGCTCT
AAAGATCTGGAAAAGTTTTTAATTCACTTAATCACTTATCCTCTTTTGAACGTAAAACAACTCCTCCCCGCTTCTTTGTT
TGTGATACCTTTAATCTTTACAAAGAGAATTTCACTTCCAAGGGAGCTTAAGTTCTTGCTCTTTCTCGTAATTTTTAACT
ACATTCCATATATTATTTCTGCAACAAGTAGGGGAAGGTATGTTCTTCCGCTCTTTCCTATCTTAGCGGTAATTTTTGCC
CACTTAATTCACGAATACTTGAGTAAGAACTGGAAAAAAGTTCTTTTATTCTCCTTAATTTTTGTAATAATTTTAAGATT
TATTTACGGGATTTTCTTCCTTCCTTACGTAAACCACAGGAAGGGAGAGCCGAAACTTCAGGCGAAGGTAGCCTACGAGC
TCACGAAAACTGGAAAAGTTGCCTGTGACTGTCCCAAGATAAAGGACTTCTGTCTTTACATCGGCTTTCTAAGGGGAGAA
CCTCTCCTGAGACCTAAGTACACGAAAGCCTGGGATTACTTGGTGGATTGTAAAGAGAGGAAAGATTTAAGCTTAATAAA
GAAGTTTTACGTAAACAAGAAGGAGGTATACCTGTATGGTAGGTTTGCTTCTGGTTTTGCTATTAATACCTTTAATCGTT
CTAGGGGTTCCAAGGTATTTGAAGGCATGTCTGGAGCTCGCCGTTGA

Upstream 100 bases:

>100_bases
ATAAGTCTTAAACTTTTCCATTTACAGTCACACTTTCTTAAGGGATTATAAGCGAAACTTATGGGTCTTATAAGCAAAAA
GACGGGCTACCATATTCCTT

Downstream 100 bases:

>100_bases
CGCTAAAGTGGCTCTGGAAAACGCGGAGGAGTTCACGGGAAAGGTTTACAAGCTTTACCTCACGAAGAGGCGCTCTGGAG
ATTGCCTTTATAAGATTAAG

Product: hypothetical protein

Products: NA

Alternate protein names: 4-amino-4-deoxy-L-arabinose lipid A transferase; Lipid IV(A) 4-amino-4-deoxy-L-arabinosyltransferase; Undecaprenyl phosphate-alpha-L-Ara4N transferase [H]

Number of amino acids: Translated: 468; Mature: 468

Protein sequence:

>468_residues
MFYILIILLATFSMIPNINEFAFRFEETTRAVVAFEMYHSGNYFQPTILGDPYYNKPPLFNWFIIISSKFFGWDIVTARA
VSVFFTLANAFLIYFFSSKVLKNKEKALLSSVFFITFADVLFWYGWLAEIDVTLSFFVTLLFIQIYKLWEEGKPIYYYTS
ALLTGLIFMIKGFPAFAFYGLSLISLSIFKRDFKVLLNFHAFASYFLALIASFWWLPFSENPEFYFRRLWEESFSRVESS
KDLEKFLIHLITYPLLNVKQLLPASLFVIPLIFTKRISLPRELKFLLFLVIFNYIPYIISATSRGRYVLPLFPILAVIFA
HLIHEYLSKNWKKVLLFSLIFVIILRFIYGIFFLPYVNHRKGEPKLQAKVAYELTKTGKVACDCPKIKDFCLYIGFLRGE
PLLRPKYTKAWDYLVDCKERKDLSLIKKFYVNKKEVYLYGRFASGFAINTFNRSRGSKVFEGMSGARR

Sequences:

>Translated_468_residues
MFYILIILLATFSMIPNINEFAFRFEETTRAVVAFEMYHSGNYFQPTILGDPYYNKPPLFNWFIIISSKFFGWDIVTARA
VSVFFTLANAFLIYFFSSKVLKNKEKALLSSVFFITFADVLFWYGWLAEIDVTLSFFVTLLFIQIYKLWEEGKPIYYYTS
ALLTGLIFMIKGFPAFAFYGLSLISLSIFKRDFKVLLNFHAFASYFLALIASFWWLPFSENPEFYFRRLWEESFSRVESS
KDLEKFLIHLITYPLLNVKQLLPASLFVIPLIFTKRISLPRELKFLLFLVIFNYIPYIISATSRGRYVLPLFPILAVIFA
HLIHEYLSKNWKKVLLFSLIFVIILRFIYGIFFLPYVNHRKGEPKLQAKVAYELTKTGKVACDCPKIKDFCLYIGFLRGE
PLLRPKYTKAWDYLVDCKERKDLSLIKKFYVNKKEVYLYGRFASGFAINTFNRSRGSKVFEGMSGARR
>Mature_468_residues
MFYILIILLATFSMIPNINEFAFRFEETTRAVVAFEMYHSGNYFQPTILGDPYYNKPPLFNWFIIISSKFFGWDIVTARA
VSVFFTLANAFLIYFFSSKVLKNKEKALLSSVFFITFADVLFWYGWLAEIDVTLSFFVTLLFIQIYKLWEEGKPIYYYTS
ALLTGLIFMIKGFPAFAFYGLSLISLSIFKRDFKVLLNFHAFASYFLALIASFWWLPFSENPEFYFRRLWEESFSRVESS
KDLEKFLIHLITYPLLNVKQLLPASLFVIPLIFTKRISLPRELKFLLFLVIFNYIPYIISATSRGRYVLPLFPILAVIFA
HLIHEYLSKNWKKVLLFSLIFVIILRFIYGIFFLPYVNHRKGEPKLQAKVAYELTKTGKVACDCPKIKDFCLYIGFLRGE
PLLRPKYTKAWDYLVDCKERKDLSLIKKFYVNKKEVYLYGRFASGFAINTFNRSRGSKVFEGMSGARR

Specific function: Catalyzes the transfer of the L-Ara4N moiety of the glycolipid undecaprenyl phosphate-alpha-L-Ara4N to lipid A. The modified arabinose is attached to lipid A and is required for resistance to polymyxin and cationic antimicrobial peptides [H]

COG id: COG1807

COG function: function code M; 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 83 family [H]

Homologues:

Organism=Escherichia coli, GI1788591, Length=326, Percent_Identity=23.9263803680982, Blast_Score=73, Evalue=5e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022839
- InterPro:   IPR003342 [H]

Pfam domain/function: PF02366 PMT [H]

EC number: =2.4.2.43 [H]

Molecular weight: Translated: 55078; Mature: 55078

Theoretical pI: Translated: 10.03; Mature: 10.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFYILIILLATFSMIPNINEFAFRFEETTRAVVAFEMYHSGNYFQPTILGDPYYNKPPLF
CHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHEEEEEECCCCCCCCEEECCCCCCCCCCE
NWFIIISSKFFGWDIVTARAVSVFFTLANAFLIYFFSSKVLKNKEKALLSSVFFITFADV
EEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LFWYGWLAEIDVTLSFFVTLLFIQIYKLWEEGKPIYYYTSALLTGLIFMIKGFPAFAFYG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHCCHHHHHHH
LSLISLSIFKRDFKVLLNFHAFASYFLALIASFWWLPFSENPEFYFRRLWEESFSRVESS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCC
KDLEKFLIHLITYPLLNVKQLLPASLFVIPLIFTKRISLPRELKFLLFLVIFNYIPYIIS
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHEE
ATSRGRYVLPLFPILAVIFAHLIHEYLSKNWKKVLLFSLIFVIILRFIYGIFFLPYVNHR
CCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
KGEPKLQAKVAYELTKTGKVACDCPKIKDFCLYIGFLRGEPLLRPKYTKAWDYLVDCKER
CCCCCHHHHHHHHHHCCCCCEECCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCC
KDLSLIKKFYVNKKEVYLYGRFASGFAINTFNRSRGSKVFEGMSGARR
CHHHHHHHHHCCCEEEEEEEEECCCEEEECCCCCCCHHHHHCCCCCCC
>Mature Secondary Structure
MFYILIILLATFSMIPNINEFAFRFEETTRAVVAFEMYHSGNYFQPTILGDPYYNKPPLF
CHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHEEEEEECCCCCCCCEEECCCCCCCCCCE
NWFIIISSKFFGWDIVTARAVSVFFTLANAFLIYFFSSKVLKNKEKALLSSVFFITFADV
EEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LFWYGWLAEIDVTLSFFVTLLFIQIYKLWEEGKPIYYYTSALLTGLIFMIKGFPAFAFYG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHCCHHHHHHH
LSLISLSIFKRDFKVLLNFHAFASYFLALIASFWWLPFSENPEFYFRRLWEESFSRVESS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCC
KDLEKFLIHLITYPLLNVKQLLPASLFVIPLIFTKRISLPRELKFLLFLVIFNYIPYIIS
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHEE
ATSRGRYVLPLFPILAVIFAHLIHEYLSKNWKKVLLFSLIFVIILRFIYGIFFLPYVNHR
CCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
KGEPKLQAKVAYELTKTGKVACDCPKIKDFCLYIGFLRGEPLLRPKYTKAWDYLVDCKER
CCCCCHHHHHHHHHHCCCCCEECCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCC
KDLSLIKKFYVNKKEVYLYGRFASGFAINTFNRSRGSKVFEGMSGARR
CHHHHHHHHHCCCEEEEEEEEECCCEEEECCCCCCCHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA