| Definition | Aquifex aeolicus VF5, complete genome. |
|---|---|
| Accession | NC_000918 |
| Length | 1,551,335 |
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The map label for this gene is gltX
Identifier: 15606455
GI number: 15606455
Start: 859084
End: 860505
Strand: Direct
Name: gltX
Synonym: aq_1221
Alternate gene names: 15606455
Gene position: 859084-860505 (Clockwise)
Preceding gene: 15606452
Following gene: 15606456
Centisome position: 55.38
GC content: 46.91
Gene sequence:
>1422_bases ATGAGTAAAGTGAAAACGAGGTTCGCACCCAGTCCAACCGGATACCTACACCTCGGAAACGCAAGAACAGCCATATTCAG TTATCTGTTTGCAAGGCACAACAACGGAGGTTTTGTACTTCGTATAGAGGACACCGATCCAGAGCGTTCAAAGAAAGAGT ATGAAGAAATGCTGATAGAGGATTTAAAGTGGCTCGGTATAGATTGGGACGAATTCTACAGACAGTCCGAGAGGTTTGAC ATATACAGGGAGTACGTGAACAAGCTCCTTGAGAGCGGTCACGCTTACCCGTGTTTTTGCACGCCGGAAGAACTTGAAAA AGAAAGAGAAGAGGCTAGAAAGAAGGGAATTCCTTACAGGTATTCTGGAAAGTGCAGACACCTGACACCAGAAGAGGTGG AGAAGTTCAAGAAGGAGGGAAAACCCTTCGCCATAAGGTTTAAAGTTCCCGAAAACAGAACCGTGGTGTTTGAAGACCTA ATAAAGGGTCACATAGCCATTAACACGGATGACTTCGGGGACTTTGTAATTGTCAGGAGCGATGGCTCACCCACTTACAA CTTCGTCGTTGTTGTTGACGACGCCCTTATGGGAATTACCCACGTGATAAGAGGAGAGGACCACATACCCAACACTCCCA AGCAAATACTCATATACGAAGCTCTCGGGTTTCCCGTTCCCAAGTTCGCACACCTTCCCGTTATACTGGGAGAGGACAGG AGTAAACTCTCAAAGAGGCACGGAGCTGTTTCGGTAAGGGCTTACAGGGAAGAAGGCTATATGCCGGAAGCCCTCTTCAA TTACCTCTGTCTCTTAGGGTGGTCCCCTCCAGAAGAGGGAAGGGAGATATTCTCAAAGGAAGAACTGATAAAGATTTTTG ACCTCAAAGACGTAAACGACTCCCCGGCGGTCTTCAACAAGGAAAAACTAAAGTGGATGAACGGAGTGTACATAAGGGAG GTGCTTCCCTTAGACGTTCTCCTTGAAAGGGCTATTCCCTTCTTGGAAAAAGCGGGCTACGACACGAGCGACAGGGAGTA TATAAAGAAAGTTCTCGAATACACGCGCGACTCCTTTGATACATTGAGCGAAATGGTAGACAGGCTCAGACCCTTCTTCG TGGACGAGTTTGAAATACCAGAAGAGCTCTGGAGCTTCCTAGACGACGAAAAGGCTTATCAGGTTCTCTCAGCTTTCTTG GAAAAAATCAGGGAGAAAAAACCCGAAACTCCCCAGGAAGTAAAGAAGCTCGCAAAGGAAATACAAAAAGCCCTGAAAGT AAAACCACCGCAGGTATGGAAACCCCTCAGGATAGCCCTCACGGGTGAACTCGAAGGTGTGGGCATAGACATACTCATAG CCGTTCTTCCTAAGGAAAAAATAGAAAAGAGGATACTGAGGGTTCTGGAAAAGCTCTCGTGA
Upstream 100 bases:
>100_bases AAGTACAGGCTCCTTGACCTTTTCTTCAGGGTATATTAATTGAAGCCTTACCATGTTCATGATAAGTTTTATTGTAATTC AAAGGTTAAAATAAACTCTC
Downstream 100 bases:
>100_bases TTTTCCTCTCCTTTAAAAAATCTTTTAAGAACATAACTATTGAAGGAAAGTTTACCTTTGAGAAGGGATTTAACGTAATT TTAGGGCCTTCGGGAGCAGG
Product: glutamyl-tRNA synthetase
Products: NA
Alternate protein names: Glutamate--tRNA ligase; GluRS
Number of amino acids: Translated: 473; Mature: 472
Protein sequence:
>473_residues MSKVKTRFAPSPTGYLHLGNARTAIFSYLFARHNNGGFVLRIEDTDPERSKKEYEEMLIEDLKWLGIDWDEFYRQSERFD IYREYVNKLLESGHAYPCFCTPEELEKEREEARKKGIPYRYSGKCRHLTPEEVEKFKKEGKPFAIRFKVPENRTVVFEDL IKGHIAINTDDFGDFVIVRSDGSPTYNFVVVVDDALMGITHVIRGEDHIPNTPKQILIYEALGFPVPKFAHLPVILGEDR SKLSKRHGAVSVRAYREEGYMPEALFNYLCLLGWSPPEEGREIFSKEELIKIFDLKDVNDSPAVFNKEKLKWMNGVYIRE VLPLDVLLERAIPFLEKAGYDTSDREYIKKVLEYTRDSFDTLSEMVDRLRPFFVDEFEIPEELWSFLDDEKAYQVLSAFL EKIREKKPETPQEVKKLAKEIQKALKVKPPQVWKPLRIALTGELEGVGIDILIAVLPKEKIEKRILRVLEKLS
Sequences:
>Translated_473_residues MSKVKTRFAPSPTGYLHLGNARTAIFSYLFARHNNGGFVLRIEDTDPERSKKEYEEMLIEDLKWLGIDWDEFYRQSERFD IYREYVNKLLESGHAYPCFCTPEELEKEREEARKKGIPYRYSGKCRHLTPEEVEKFKKEGKPFAIRFKVPENRTVVFEDL IKGHIAINTDDFGDFVIVRSDGSPTYNFVVVVDDALMGITHVIRGEDHIPNTPKQILIYEALGFPVPKFAHLPVILGEDR SKLSKRHGAVSVRAYREEGYMPEALFNYLCLLGWSPPEEGREIFSKEELIKIFDLKDVNDSPAVFNKEKLKWMNGVYIRE VLPLDVLLERAIPFLEKAGYDTSDREYIKKVLEYTRDSFDTLSEMVDRLRPFFVDEFEIPEELWSFLDDEKAYQVLSAFL EKIREKKPETPQEVKKLAKEIQKALKVKPPQVWKPLRIALTGELEGVGIDILIAVLPKEKIEKRILRVLEKLS >Mature_472_residues SKVKTRFAPSPTGYLHLGNARTAIFSYLFARHNNGGFVLRIEDTDPERSKKEYEEMLIEDLKWLGIDWDEFYRQSERFDI YREYVNKLLESGHAYPCFCTPEELEKEREEARKKGIPYRYSGKCRHLTPEEVEKFKKEGKPFAIRFKVPENRTVVFEDLI KGHIAINTDDFGDFVIVRSDGSPTYNFVVVVDDALMGITHVIRGEDHIPNTPKQILIYEALGFPVPKFAHLPVILGEDRS KLSKRHGAVSVRAYREEGYMPEALFNYLCLLGWSPPEEGREIFSKEELIKIFDLKDVNDSPAVFNKEKLKWMNGVYIREV LPLDVLLERAIPFLEKAGYDTSDREYIKKVLEYTRDSFDTLSEMVDRLRPFFVDEFEIPEELWSFLDDEKAYQVLSAFLE KIREKKPETPQEVKKLAKEIQKALKVKPPQVWKPLRIALTGELEGVGIDILIAVLPKEKIEKRILRVLEKLS
Specific function: Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction:glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
COG id: COG0008
COG function: function code J; Glutamyl- and glutaminyl-tRNA synthetases
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I aminoacyl-tRNA synthetase family
Homologues:
Organism=Homo sapiens, GI134288884, Length=502, Percent_Identity=34.6613545816733, Blast_Score=260, Evalue=2e-69, Organism=Homo sapiens, GI62241042, Length=231, Percent_Identity=28.1385281385281, Blast_Score=100, Evalue=6e-21, Organism=Homo sapiens, GI4826960, Length=105, Percent_Identity=34.2857142857143, Blast_Score=73, Evalue=5e-13, Organism=Escherichia coli, GI1788743, Length=469, Percent_Identity=43.4968017057569, Blast_Score=377, Evalue=1e-105, Organism=Escherichia coli, GI226510925, Length=249, Percent_Identity=37.7510040160643, Blast_Score=147, Evalue=2e-36, Organism=Escherichia coli, GI1786895, Length=210, Percent_Identity=30.4761904761905, Blast_Score=83, Evalue=3e-17, Organism=Caenorhabditis elegans, GI71993394, Length=484, Percent_Identity=31.8181818181818, Blast_Score=220, Evalue=1e-57, Organism=Caenorhabditis elegans, GI17511007, Length=245, Percent_Identity=25.7142857142857, Blast_Score=88, Evalue=1e-17, Organism=Caenorhabditis elegans, GI17543332, Length=104, Percent_Identity=31.7307692307692, Blast_Score=66, Evalue=4e-11, Organism=Saccharomyces cerevisiae, GI6324540, Length=490, Percent_Identity=38.1632653061225, Blast_Score=297, Evalue=2e-81, Organism=Saccharomyces cerevisiae, GI6321192, Length=305, Percent_Identity=27.8688524590164, Blast_Score=102, Evalue=1e-22, Organism=Saccharomyces cerevisiae, GI6324742, Length=125, Percent_Identity=35.2, Blast_Score=90, Evalue=8e-19, Organism=Drosophila melanogaster, GI24665321, Length=500, Percent_Identity=37, Blast_Score=287, Evalue=1e-77, Organism=Drosophila melanogaster, GI24649466, Length=221, Percent_Identity=27.1493212669683, Blast_Score=89, Evalue=8e-18, Organism=Drosophila melanogaster, GI17864488, Length=105, Percent_Identity=33.3333333333333, Blast_Score=66, Evalue=5e-11,
Paralogues:
None
Copy number: 1,800 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): SYE_AQUAE (O67271)
Other databases:
- EMBL: AE000657 - PIR: D70405 - RefSeq: NP_213835.1 - ProteinModelPortal: O67271 - SMR: O67271 - GeneID: 1192617 - GenomeReviews: AE000657_GR - KEGG: aae:aq_1221 - NMPDR: fig|224324.1.peg.850 - HOGENOM: HBG628189 - OMA: DEASWTK - PhylomeDB: O67271 - ProtClustDB: PRK01406 - BioCyc: AAEO224324:AQ_1221-MONOMER - BRENDA: 6.1.1.17 - GO: GO:0005737 - HAMAP: MF_00022_B - InterPro: IPR008925 - InterPro: IPR020752 - InterPro: IPR020751 - InterPro: IPR001412 - InterPro: IPR004527 - InterPro: IPR000924 - InterPro: IPR020061 - InterPro: IPR020058 - InterPro: IPR014729 - Gene3D: G3DSA:1.10.8.70 - Gene3D: G3DSA:1.10.1160.10 - Gene3D: G3DSA:3.40.50.620 - Gene3D: G3DSA:1.10.10.350 - PANTHER: PTHR10119 - PRINTS: PR00987 - TIGRFAMs: TIGR00464
Pfam domain/function: PF00749 tRNA-synt_1c; SSF48163 tRNA-synt_bind
EC number: =6.1.1.17
Molecular weight: Translated: 55122; Mature: 54991
Theoretical pI: Translated: 5.95; Mature: 5.95
Prosite motif: PS00178 AA_TRNA_LIGASE_I
Important sites: BINDING 245-245
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKVKTRFAPSPTGYLHLGNARTAIFSYLFARHNNGGFVLRIEDTDPERSKKEYEEMLIE CCCCCCCCCCCCCCEEEECCHHHHHHHHHHHEECCCEEEEEEECCCCHHHHHHHHHHHHH DLKWLGIDWDEFYRQSERFDIYREYVNKLLESGHAYPCFCTPEELEKEREEARKKGIPYR HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCHHHHHHHHHHHHHCCCCEE YSGKCRHLTPEEVEKFKKEGKPFAIRFKVPENRTVVFEDLIKGHIAINTDDFGDFVIVRS ECCCCCCCCHHHHHHHHHCCCCEEEEEECCCCCEEEHHHHHCCCEEEECCCCCCEEEEEC DGSPTYNFVVVVDDALMGITHVIRGEDHIPNTPKQILIYEALGFPVPKFAHLPVILGEDR CCCCCEEEEEEECCHHHHHHHHHCCCCCCCCCCHHEEEEHHHCCCCCCCCCCCEEECCCH SKLSKRHGAVSVRAYREEGYMPEALFNYLCLLGWSPPEEGREIFSKEELIKIFDLKDVND HHHHHHCCCEEEEEEHHCCCCHHHHHHHHHHHCCCCCHHHHHHHCHHHHHHHCCCCCCCC SPAVFNKEKLKWMNGVYIREVLPLDVLLERAIPFLEKAGYDTSDREYIKKVLEYTRDSFD CCCCCCHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCHHH TLSEMVDRLRPFFVDEFEIPEELWSFLDDEKAYQVLSAFLEKIREKKPETPQEVKKLAKE HHHHHHHHHCCHHCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH IQKALKVKPPQVWKPLRIALTGELEGVGIDILIAVLPKEKIEKRILRVLEKLS HHHHHCCCCCCCCCCEEEEEECCCCCCCCEEEEEECCHHHHHHHHHHHHHHCC >Mature Secondary Structure SKVKTRFAPSPTGYLHLGNARTAIFSYLFARHNNGGFVLRIEDTDPERSKKEYEEMLIE CCCCCCCCCCCCCEEEECCHHHHHHHHHHHEECCCEEEEEEECCCCHHHHHHHHHHHHH DLKWLGIDWDEFYRQSERFDIYREYVNKLLESGHAYPCFCTPEELEKEREEARKKGIPYR HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCHHHHHHHHHHHHHCCCCEE YSGKCRHLTPEEVEKFKKEGKPFAIRFKVPENRTVVFEDLIKGHIAINTDDFGDFVIVRS ECCCCCCCCHHHHHHHHHCCCCEEEEEECCCCCEEEHHHHHCCCEEEECCCCCCEEEEEC DGSPTYNFVVVVDDALMGITHVIRGEDHIPNTPKQILIYEALGFPVPKFAHLPVILGEDR CCCCCEEEEEEECCHHHHHHHHHCCCCCCCCCCHHEEEEHHHCCCCCCCCCCCEEECCCH SKLSKRHGAVSVRAYREEGYMPEALFNYLCLLGWSPPEEGREIFSKEELIKIFDLKDVND HHHHHHCCCEEEEEEHHCCCCHHHHHHHHHHHCCCCCHHHHHHHCHHHHHHHCCCCCCCC SPAVFNKEKLKWMNGVYIREVLPLDVLLERAIPFLEKAGYDTSDREYIKKVLEYTRDSFD CCCCCCHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCHHH TLSEMVDRLRPFFVDEFEIPEELWSFLDDEKAYQVLSAFLEKIREKKPETPQEVKKLAKE HHHHHHHHHCCHHCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH IQKALKVKPPQVWKPLRIALTGELEGVGIDILIAVLPKEKIEKRILRVLEKLS HHHHHCCCCCCCCCCEEEEEECCCCCCCCEEEEEECCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9537320