| Definition | Aquifex aeolicus VF5, complete genome. |
|---|---|
| Accession | NC_000918 |
| Length | 1,551,335 |
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The map label for this gene is 15606412
Identifier: 15606412
GI number: 15606412
Start: 819009
End: 819743
Strand: Direct
Name: 15606412
Synonym: aq_1166
Alternate gene names: NA
Gene position: 819009-819743 (Clockwise)
Preceding gene: 15606411
Following gene: 15606413
Centisome position: 52.79
GC content: 47.48
Gene sequence:
>735_bases TTGTGGAGGTTGTACATGGCTAAGAAAAATCCTATCCAGCCCGGACCAGAAGGATACATACCAACCCCTGCCGCATTCCA AGGATGTGACCTTCCTCCACCAGGAAAAGCACTCCTGTACGGAGAAATAGTAGACGAAGAAGTAGCAATGAGGGAAGCCG CAAAGGCACTCCTGACAAGAAGAAATCCCACTATATTCCCCGGTCCTCTGGTCCTGTGGGGATGGAACGCGGACGCAATG GAAAAAGCAAAAGCAGTTCTGGAACTCGCCATGGAAATTCCCAACTGCAGAATTATCCCCATGCCCGACTACAGACCCAA GTACCCCAAAATTGACCCAGAAGCGGAAATAAACCCGAACCACCCCAACTTAACGATACTTCACAACAAAATAGAGGCTT GTATCTTTGTAGGCGTTCACTGTCACTACGCAAACTTATCTTTAAGGATGATAAGGGCGGGAACGAACTGCTTTACCATA GCTCTATGTGCTGAAATGGGACACGAAGACGCAATGGTTTCCCTAAGAGACGTTCACGCGGATGAAATAAGGAAGTTCAG GGACGTTGTAGTAGAAGTCAGAAAGGAACTCGGAATAGAGTGGGAACCCAAACTACCCCCGGAAAATCCATCACTTCCAA AAGAAGACTGGGTCAAGATATCACCCCTGGACTTCGGAGAGTATGCGTATCTGCTTATCCCCAGAAGGGGTGAAATAGTA GAAGAAAGTGAATAA
Upstream 100 bases:
>100_bases CCTTAAATTGGACGTTATATACACTTAAACCGTTGTTTTAATTTTGAGCTTCCTCATAAACTTTTTAAGCTTAAATTATA TCTTTAGGTAACAAATTCTT
Downstream 100 bases:
>100_bases CAATTGAGGAGGTGTTGTAATGCCTGAGCAAAGAGTTGTTGAGCCTGACTACCTTCTTTTAGAGGCTCCAAGGGAGAAAA AATTTATTACCGGATCTCAG
Product: hypothetical protein
Products: NA
Alternate protein names: Lipoate-Protein Ligase A; 2-OxoglutarateFerredoxin Oxidoredutase Subunit Delta; Lipoate-Protein Ligase; PyruvateFerredoxin Oxidoreductase Subunit Delta; Subunit Of 2-OxoglutarateFerredoxin Oxidoredutase
Number of amino acids: Translated: 244; Mature: 244
Protein sequence:
>244_residues MWRLYMAKKNPIQPGPEGYIPTPAAFQGCDLPPPGKALLYGEIVDEEVAMREAAKALLTRRNPTIFPGPLVLWGWNADAM EKAKAVLELAMEIPNCRIIPMPDYRPKYPKIDPEAEINPNHPNLTILHNKIEACIFVGVHCHYANLSLRMIRAGTNCFTI ALCAEMGHEDAMVSLRDVHADEIRKFRDVVVEVRKELGIEWEPKLPPENPSLPKEDWVKISPLDFGEYAYLLIPRRGEIV EESE
Sequences:
>Translated_244_residues MWRLYMAKKNPIQPGPEGYIPTPAAFQGCDLPPPGKALLYGEIVDEEVAMREAAKALLTRRNPTIFPGPLVLWGWNADAM EKAKAVLELAMEIPNCRIIPMPDYRPKYPKIDPEAEINPNHPNLTILHNKIEACIFVGVHCHYANLSLRMIRAGTNCFTI ALCAEMGHEDAMVSLRDVHADEIRKFRDVVVEVRKELGIEWEPKLPPENPSLPKEDWVKISPLDFGEYAYLLIPRRGEIV EESE >Mature_244_residues MWRLYMAKKNPIQPGPEGYIPTPAAFQGCDLPPPGKALLYGEIVDEEVAMREAAKALLTRRNPTIFPGPLVLWGWNADAM EKAKAVLELAMEIPNCRIIPMPDYRPKYPKIDPEAEINPNHPNLTILHNKIEACIFVGVHCHYANLSLRMIRAGTNCFTI ALCAEMGHEDAMVSLRDVHADEIRKFRDVVVEVRKELGIEWEPKLPPENPSLPKEDWVKISPLDFGEYAYLLIPRRGEIV EESE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27646; Mature: 27646
Theoretical pI: Translated: 5.22; Mature: 5.22
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 6.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MWRLYMAKKNPIQPGPEGYIPTPAAFQGCDLPPPGKALLYGEIVDEEVAMREAAKALLTR CEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHC RNPTIFPGPLVLWGWNADAMEKAKAVLELAMEIPNCRIIPMPDYRPKYPKIDPEAEINPN CCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCC HPNLTILHNKIEACIFVGVHCHYANLSLRMIRAGTNCFTIALCAEMGHEDAMVSLRDVHA CCCEEEEECCCCEEEEEEEEEEEECCEEEEEECCCCEEEEEEEHHCCCCHHEEEHHHCCH DEIRKFRDVVVEVRKELGIEWEPKLPPENPSLPKEDWVKISPLDFGEYAYLLIPRRGEIV HHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCHHHCEEECCCCCCCEEEEEEECCCCCC EESE CCCC >Mature Secondary Structure MWRLYMAKKNPIQPGPEGYIPTPAAFQGCDLPPPGKALLYGEIVDEEVAMREAAKALLTR CEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHC RNPTIFPGPLVLWGWNADAMEKAKAVLELAMEIPNCRIIPMPDYRPKYPKIDPEAEINPN CCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCC HPNLTILHNKIEACIFVGVHCHYANLSLRMIRAGTNCFTIALCAEMGHEDAMVSLRDVHA CCCEEEEECCCCEEEEEEEEEEEECCEEEEEECCCCEEEEEEEHHCCCCHHEEEHHHCCH DEIRKFRDVVVEVRKELGIEWEPKLPPENPSLPKEDWVKISPLDFGEYAYLLIPRRGEIV HHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCHHHCEEECCCCCCCEEEEEEECCCCCC EESE CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA