| Definition | Aquifex aeolicus VF5, complete genome. |
|---|---|
| Accession | NC_000918 |
| Length | 1,551,335 |
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The map label for this gene is cphA2 [H]
Identifier: 15606287
GI number: 15606287
Start: 673738
End: 674661
Strand: Direct
Name: cphA2 [H]
Synonym: aq_974
Alternate gene names: 15606287
Gene position: 673738-674661 (Clockwise)
Preceding gene: 15606286
Following gene: 15606288
Centisome position: 43.43
GC content: 42.97
Gene sequence:
>924_bases GTGGGAGGTGCGGTCATGTTAAAAACGCTCTTTGTACTCCTGTTAATCATTAGCACAGCTTTTTCAATGACATTAAAGAA AGTTGAAGAAAACCTCTACATGGTGAGAGGAAACGATGGACTTCCTTCCAAGGAAAACAAAGGTTTTATCTCCAACGCCT ACGCGGTTTTAACAGAAGAGGGATGGGTGGTTATAGACACCTTAACCACTCCCGAGCTCTCCGAGGAATTTCTGAACCTT CTTAAAAAGGTTTCAAACAAACCAGTAATTTACGCGATAGTAACTCACTACCACCTTGACCACTGGTACGGGGCAAAAAC CTTCAAGGATAAAGGTGCTAAGGTAATAGCCCACGAAAAACTAAAAGAGTTCTACGATTCTGGCGAAGCCCTTCAAGTTC TGGAGGCTCAGAAGAAGAGGTTTAAGGGAGTGCTTGACAGTGTAGAGCTCGTACCTCCCGACGAAGTTGTAAAGGATAAA AAGGTTTTAAAAGTCGGTAAAGATGTATTTGAGATTTACGCAATGCCTCCCGCGCACACAAACTCCGACCTCGTAATTTA CTGGAAGAACAGGAAAGTCCTTTTTGTAGGGGACCTCGTTTACATAAACAGGATTCCCTTTATGGGGGACAGGAACGCGA GTTCCAAAGGGTGGTTAGAGGTTCTGGAAAGATTAAAAGAGTTTGACGCGAGAATGCTCCTCGGTGGGCACAACTATCCC ATGAATAAGGATGCGATAGACTGGACCTACAACTACATAAAGTTCGTGAGAGACACGGTAAAGAAGCTAAAAGACGAGGG CTACTTCATAGACGAGATAAAGGAGGCGTTTAAAGGAAACCCGTACGAAAAAGTTAAAATGTATGAAGTTTTTCACAACA CAAACGTGTGGAAGGTTTACAACGAACTTGATTTAGAACTTTGA
Upstream 100 bases:
>100_bases CTACTACGCAAAGGTGTTTTTAGATTTGCTTAACTCCCTAAAAATCCTAAAAATATGAAATTAATCATTCTTTCCTTTTC CCTCAGGTTCTAACTTTTCC
Downstream 100 bases:
>100_bases GGAGGCACGTTATGGACAAAGTTGAGAGGAGACTTTACGAGCTTTACGAGAAGGCTATCAATTACGAGCCCTTATCCAAG GAGGAAGCCCTTTATATACT
Product: beta lactamase precursor
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 307; Mature: 306
Protein sequence:
>307_residues MGGAVMLKTLFVLLLIISTAFSMTLKKVEENLYMVRGNDGLPSKENKGFISNAYAVLTEEGWVVIDTLTTPELSEEFLNL LKKVSNKPVIYAIVTHYHLDHWYGAKTFKDKGAKVIAHEKLKEFYDSGEALQVLEAQKKRFKGVLDSVELVPPDEVVKDK KVLKVGKDVFEIYAMPPAHTNSDLVIYWKNRKVLFVGDLVYINRIPFMGDRNASSKGWLEVLERLKEFDARMLLGGHNYP MNKDAIDWTYNYIKFVRDTVKKLKDEGYFIDEIKEAFKGNPYEKVKMYEVFHNTNVWKVYNELDLEL
Sequences:
>Translated_307_residues MGGAVMLKTLFVLLLIISTAFSMTLKKVEENLYMVRGNDGLPSKENKGFISNAYAVLTEEGWVVIDTLTTPELSEEFLNL LKKVSNKPVIYAIVTHYHLDHWYGAKTFKDKGAKVIAHEKLKEFYDSGEALQVLEAQKKRFKGVLDSVELVPPDEVVKDK KVLKVGKDVFEIYAMPPAHTNSDLVIYWKNRKVLFVGDLVYINRIPFMGDRNASSKGWLEVLERLKEFDARMLLGGHNYP MNKDAIDWTYNYIKFVRDTVKKLKDEGYFIDEIKEAFKGNPYEKVKMYEVFHNTNVWKVYNELDLEL >Mature_306_residues GGAVMLKTLFVLLLIISTAFSMTLKKVEENLYMVRGNDGLPSKENKGFISNAYAVLTEEGWVVIDTLTTPELSEEFLNLL KKVSNKPVIYAIVTHYHLDHWYGAKTFKDKGAKVIAHEKLKEFYDSGEALQVLEAQKKRFKGVLDSVELVPPDEVVKDKK VLKVGKDVFEIYAMPPAHTNSDLVIYWKNRKVLFVGDLVYINRIPFMGDRNASSKGWLEVLERLKEFDARMLLGGHNYPM NKDAIDWTYNYIKFVRDTVKKLKDEGYFIDEIKEAFKGNPYEKVKMYEVFHNTNVWKVYNELDLEL
Specific function: Can hydrolyze carbapenem compounds [H]
COG id: COG0491
COG function: function code R; Zn-dependent hydrolases, including glyoxylases
Gene ontology:
Cell location: Periplasm (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-B beta-lactamase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001018 - InterPro: IPR001279 [H]
Pfam domain/function: PF00753 Lactamase_B [H]
EC number: =3.5.2.6 [H]
Molecular weight: Translated: 35482; Mature: 35350
Theoretical pI: Translated: 7.87; Mature: 7.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGGAVMLKTLFVLLLIISTAFSMTLKKVEENLYMVRGNDGLPSKENKGFISNAYAVLTEE CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCHHCEEEEEECC GWVVIDTLTTPELSEEFLNLLKKVSNKPVIYAIVTHYHLDHWYGAKTFKDKGAKVIAHEK CEEEEEECCCCHHHHHHHHHHHHHCCCCEEEEEEEHHHHHHHCCCCHHHCCCCEEHHHHH LKEFYDSGEALQVLEAQKKRFKGVLDSVELVPPDEVVKDKKVLKVGKDVFEIYAMPPAHT HHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHEECCCCCC NSDLVIYWKNRKVLFVGDLVYINRIPFMGDRNASSKGWLEVLERLKEFDARMLLGGHNYP CCCEEEEECCCEEEEEECEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCHHEEECCCCCC MNKDAIDWTYNYIKFVRDTVKKLKDEGYFIDEIKEAFKGNPYEKVKMYEVFHNTNVWKVY CCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHCCCEEEEE NELDLEL CCCCCCC >Mature Secondary Structure GGAVMLKTLFVLLLIISTAFSMTLKKVEENLYMVRGNDGLPSKENKGFISNAYAVLTEE CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCHHCEEEEEECC GWVVIDTLTTPELSEEFLNLLKKVSNKPVIYAIVTHYHLDHWYGAKTFKDKGAKVIAHEK CEEEEEECCCCHHHHHHHHHHHHHCCCCEEEEEEEHHHHHHHCCCCHHHCCCCEEHHHHH LKEFYDSGEALQVLEAQKKRFKGVLDSVELVPPDEVVKDKKVLKVGKDVFEIYAMPPAHT HHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHEECCCCCC NSDLVIYWKNRKVLFVGDLVYINRIPFMGDRNASSKGWLEVLERLKEFDARMLLGGHNYP CCCEEEEECCCEEEEEECEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCHHEEECCCCCC MNKDAIDWTYNYIKFVRDTVKKLKDEGYFIDEIKEAFKGNPYEKVKMYEVFHNTNVWKVY CCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHCCCEEEEE NELDLEL CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1856163 [H]