| Definition | Aquifex aeolicus VF5, complete genome. |
|---|---|
| Accession | NC_000918 |
| Length | 1,551,335 |
Click here to switch to the map view.
The map label for this gene is 15606001
Identifier: 15606001
GI number: 15606001
Start: 366297
End: 367154
Strand: Direct
Name: 15606001
Synonym: aq_539
Alternate gene names: NA
Gene position: 366297-367154 (Clockwise)
Preceding gene: 15606000
Following gene: 15606003
Centisome position: 23.61
GC content: 39.04
Gene sequence:
>858_bases ATGTTAAGGGCTTACATATTTTACAGGCTTGTAAAGAACACCTTACTGACCGCCTTTATACTTTCCTTAATACTCCTCAC ACTTCAGCTTACCCGTCTTAGTAATGTGCTTTTCGGTATTCCCTTTAAAGACTTTATGGGCTTTCTTGTGGTGTGGAACG CTTACTACACTTACTTTTTCATACCAGAAGGTGTAATACTTTCAACCTTTTTCCTGATGAAACACTTCAAGGACAAGAAA TTACTCCACGTCTTTTACTCCTTCAGGATTTCCGACTTCAGGATTTTCCTTTATTGTTCTATCCCATTTTTAACTTTTTT CCTAATAAGCGCTTTGCTTTCCAACACGCTTTTGGAAGAAAAGGTAGCCTTTACGCGTAAGAACATGCTCTTTAAGCTCC AGGAGAAGTTTTTTAGTGAAGTTCCCGCGGGAACCTTCGTCAGCTTCGGAGCTGTAGTTCTGCATGCGGAAAAGAGGGAA GGAAATACCCTAAAAGAAGCCTTCTTTAAGTTCGGCGATATTACGGTTCTTTCAGAGTATTTGAAGTATAAGGGAAACGG AGTGTTTGAATTCAGAAGAGGAACGGTGATAACAGAAGAGGAAAACTACTTTGTCGTAAAGTTTAACGAGTACACACTCA ATTTAAAGCAATTTCAGAAGAAAAAACTCCGTGAAAAACGTCTTAAAGAGAGCAAAGTAGTTAATTACGTAAACGTTGCT ACACTCCCCTTATTCTTTTTCCTGAGTTTTACAGTAGCCCTGAAGTTCTGCCACGGAGGGCTTTCTTACTACGCATTCGC GTCTCTCTTCATAGTTGTACACCAGTTGATAATTTTTGTGGTGAAATTAATGCTTTAA
Upstream 100 bases:
>100_bases TACGGTGCTAACCTGCCGGCAATTGAGTGGAGCAGGTGGAAGAGGATATACGTCTACCTTTTAAGACTTCCAGAACTCTT CAAGAAGATAACTACCTGAA
Downstream 100 bases:
>100_bases GAGGTTTTTGAGGCCATCTACCACGAATTGAACGGATATAGCCAGAAGGAGTATGCCCGAAATTCTCGTGATTAAGTTAA TACCGGTCCTTCCGAGCACT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 285; Mature: 285
Protein sequence:
>285_residues MLRAYIFYRLVKNTLLTAFILSLILLTLQLTRLSNVLFGIPFKDFMGFLVVWNAYYTYFFIPEGVILSTFFLMKHFKDKK LLHVFYSFRISDFRIFLYCSIPFLTFFLISALLSNTLLEEKVAFTRKNMLFKLQEKFFSEVPAGTFVSFGAVVLHAEKRE GNTLKEAFFKFGDITVLSEYLKYKGNGVFEFRRGTVITEEENYFVVKFNEYTLNLKQFQKKKLREKRLKESKVVNYVNVA TLPLFFFLSFTVALKFCHGGLSYYAFASLFIVVHQLIIFVVKLML
Sequences:
>Translated_285_residues MLRAYIFYRLVKNTLLTAFILSLILLTLQLTRLSNVLFGIPFKDFMGFLVVWNAYYTYFFIPEGVILSTFFLMKHFKDKK LLHVFYSFRISDFRIFLYCSIPFLTFFLISALLSNTLLEEKVAFTRKNMLFKLQEKFFSEVPAGTFVSFGAVVLHAEKRE GNTLKEAFFKFGDITVLSEYLKYKGNGVFEFRRGTVITEEENYFVVKFNEYTLNLKQFQKKKLREKRLKESKVVNYVNVA TLPLFFFLSFTVALKFCHGGLSYYAFASLFIVVHQLIIFVVKLML >Mature_285_residues MLRAYIFYRLVKNTLLTAFILSLILLTLQLTRLSNVLFGIPFKDFMGFLVVWNAYYTYFFIPEGVILSTFFLMKHFKDKK LLHVFYSFRISDFRIFLYCSIPFLTFFLISALLSNTLLEEKVAFTRKNMLFKLQEKFFSEVPAGTFVSFGAVVLHAEKRE GNTLKEAFFKFGDITVLSEYLKYKGNGVFEFRRGTVITEEENYFVVKFNEYTLNLKQFQKKKLREKRLKESKVVNYVNVA TLPLFFFLSFTVALKFCHGGLSYYAFASLFIVVHQLIIFVVKLML
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential)
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y539_AQUAE (O66818)
Other databases:
- EMBL: AE000657 - PIR: F70348 - RefSeq: NP_213378.1 - GeneID: 1193236 - GenomeReviews: AE000657_GR - KEGG: aae:aq_539 - NMPDR: fig|224324.1.peg.393 - OMA: RISDFRI - ProtClustDB: CLSK2299423 - BioCyc: AAEO224324:AQ_539-MONOMER - InterPro: IPR005495
Pfam domain/function: PF03739 YjgP_YjgQ
EC number: NA
Molecular weight: Translated: 33543; Mature: 33543
Theoretical pI: Translated: 10.21; Mature: 10.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0xc343210)-; HASH(0xbda8838)-; HASH(0x40690abc)-; HASH(0xc07997c)-; HASH(0xbec360c)-; HASH(0xba12d40)-;
Cys/Met content:
0.7 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRAYIFYRLVKNTLLTAFILSLILLTLQLTRLSNVLFGIPFKDFMGFLVVWNAYYTYFF CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHEEE IPEGVILSTFFLMKHFKDKKLLHVFYSFRISDFRIFLYCSIPFLTFFLISALLSNTLLEE CCCHHHHHHHHHHHHHCCHHHHHHHHHHHHCCEEEEEEECHHHHHHHHHHHHHHHHHHHH KVAFTRKNMLFKLQEKFFSEVPAGTFVSFGAVVLHAEKREGNTLKEAFFKFGDITVLSEY HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHEEEECCCCCCHHHHHHHHHCCHHHHHHH LKYKGNGVFEFRRGTVITEEENYFVVKFNEYTLNLKQFQKKKLREKRLKESKVVNYVNVA HHHCCCCEEEEECCEEEEECCCEEEEEEECEEECHHHHHHHHHHHHHHHHHHHHHHHHHH TLPLFFFLSFTVALKFCHGGLSYYAFASLFIVVHQLIIFVVKLML HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH >Mature Secondary Structure MLRAYIFYRLVKNTLLTAFILSLILLTLQLTRLSNVLFGIPFKDFMGFLVVWNAYYTYFF CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHEEE IPEGVILSTFFLMKHFKDKKLLHVFYSFRISDFRIFLYCSIPFLTFFLISALLSNTLLEE CCCHHHHHHHHHHHHHCCHHHHHHHHHHHHCCEEEEEEECHHHHHHHHHHHHHHHHHHHH KVAFTRKNMLFKLQEKFFSEVPAGTFVSFGAVVLHAEKREGNTLKEAFFKFGDITVLSEY HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHEEEECCCCCCHHHHHHHHHCCHHHHHHH LKYKGNGVFEFRRGTVITEEENYFVVKFNEYTLNLKQFQKKKLREKRLKESKVVNYVNVA HHHCCCCEEEEECCEEEEECCCEEEEEEECEEECHHHHHHHHHHHHHHHHHHHHHHHHHH TLPLFFFLSFTVALKFCHGGLSYYAFASLFIVVHQLIIFVVKLML HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9537320