Definition Aquifex aeolicus VF5, complete genome.
Accession NC_000918
Length 1,551,335

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The map label for this gene is 15606001

Identifier: 15606001

GI number: 15606001

Start: 366297

End: 367154

Strand: Direct

Name: 15606001

Synonym: aq_539

Alternate gene names: NA

Gene position: 366297-367154 (Clockwise)

Preceding gene: 15606000

Following gene: 15606003

Centisome position: 23.61

GC content: 39.04

Gene sequence:

>858_bases
ATGTTAAGGGCTTACATATTTTACAGGCTTGTAAAGAACACCTTACTGACCGCCTTTATACTTTCCTTAATACTCCTCAC
ACTTCAGCTTACCCGTCTTAGTAATGTGCTTTTCGGTATTCCCTTTAAAGACTTTATGGGCTTTCTTGTGGTGTGGAACG
CTTACTACACTTACTTTTTCATACCAGAAGGTGTAATACTTTCAACCTTTTTCCTGATGAAACACTTCAAGGACAAGAAA
TTACTCCACGTCTTTTACTCCTTCAGGATTTCCGACTTCAGGATTTTCCTTTATTGTTCTATCCCATTTTTAACTTTTTT
CCTAATAAGCGCTTTGCTTTCCAACACGCTTTTGGAAGAAAAGGTAGCCTTTACGCGTAAGAACATGCTCTTTAAGCTCC
AGGAGAAGTTTTTTAGTGAAGTTCCCGCGGGAACCTTCGTCAGCTTCGGAGCTGTAGTTCTGCATGCGGAAAAGAGGGAA
GGAAATACCCTAAAAGAAGCCTTCTTTAAGTTCGGCGATATTACGGTTCTTTCAGAGTATTTGAAGTATAAGGGAAACGG
AGTGTTTGAATTCAGAAGAGGAACGGTGATAACAGAAGAGGAAAACTACTTTGTCGTAAAGTTTAACGAGTACACACTCA
ATTTAAAGCAATTTCAGAAGAAAAAACTCCGTGAAAAACGTCTTAAAGAGAGCAAAGTAGTTAATTACGTAAACGTTGCT
ACACTCCCCTTATTCTTTTTCCTGAGTTTTACAGTAGCCCTGAAGTTCTGCCACGGAGGGCTTTCTTACTACGCATTCGC
GTCTCTCTTCATAGTTGTACACCAGTTGATAATTTTTGTGGTGAAATTAATGCTTTAA

Upstream 100 bases:

>100_bases
TACGGTGCTAACCTGCCGGCAATTGAGTGGAGCAGGTGGAAGAGGATATACGTCTACCTTTTAAGACTTCCAGAACTCTT
CAAGAAGATAACTACCTGAA

Downstream 100 bases:

>100_bases
GAGGTTTTTGAGGCCATCTACCACGAATTGAACGGATATAGCCAGAAGGAGTATGCCCGAAATTCTCGTGATTAAGTTAA
TACCGGTCCTTCCGAGCACT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 285; Mature: 285

Protein sequence:

>285_residues
MLRAYIFYRLVKNTLLTAFILSLILLTLQLTRLSNVLFGIPFKDFMGFLVVWNAYYTYFFIPEGVILSTFFLMKHFKDKK
LLHVFYSFRISDFRIFLYCSIPFLTFFLISALLSNTLLEEKVAFTRKNMLFKLQEKFFSEVPAGTFVSFGAVVLHAEKRE
GNTLKEAFFKFGDITVLSEYLKYKGNGVFEFRRGTVITEEENYFVVKFNEYTLNLKQFQKKKLREKRLKESKVVNYVNVA
TLPLFFFLSFTVALKFCHGGLSYYAFASLFIVVHQLIIFVVKLML

Sequences:

>Translated_285_residues
MLRAYIFYRLVKNTLLTAFILSLILLTLQLTRLSNVLFGIPFKDFMGFLVVWNAYYTYFFIPEGVILSTFFLMKHFKDKK
LLHVFYSFRISDFRIFLYCSIPFLTFFLISALLSNTLLEEKVAFTRKNMLFKLQEKFFSEVPAGTFVSFGAVVLHAEKRE
GNTLKEAFFKFGDITVLSEYLKYKGNGVFEFRRGTVITEEENYFVVKFNEYTLNLKQFQKKKLREKRLKESKVVNYVNVA
TLPLFFFLSFTVALKFCHGGLSYYAFASLFIVVHQLIIFVVKLML
>Mature_285_residues
MLRAYIFYRLVKNTLLTAFILSLILLTLQLTRLSNVLFGIPFKDFMGFLVVWNAYYTYFFIPEGVILSTFFLMKHFKDKK
LLHVFYSFRISDFRIFLYCSIPFLTFFLISALLSNTLLEEKVAFTRKNMLFKLQEKFFSEVPAGTFVSFGAVVLHAEKRE
GNTLKEAFFKFGDITVLSEYLKYKGNGVFEFRRGTVITEEENYFVVKFNEYTLNLKQFQKKKLREKRLKESKVVNYVNVA
TLPLFFFLSFTVALKFCHGGLSYYAFASLFIVVHQLIIFVVKLML

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y539_AQUAE (O66818)

Other databases:

- EMBL:   AE000657
- PIR:   F70348
- RefSeq:   NP_213378.1
- GeneID:   1193236
- GenomeReviews:   AE000657_GR
- KEGG:   aae:aq_539
- NMPDR:   fig|224324.1.peg.393
- OMA:   RISDFRI
- ProtClustDB:   CLSK2299423
- BioCyc:   AAEO224324:AQ_539-MONOMER
- InterPro:   IPR005495

Pfam domain/function: PF03739 YjgP_YjgQ

EC number: NA

Molecular weight: Translated: 33543; Mature: 33543

Theoretical pI: Translated: 10.21; Mature: 10.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xc343210)-; HASH(0xbda8838)-; HASH(0x40690abc)-; HASH(0xc07997c)-; HASH(0xbec360c)-; HASH(0xba12d40)-;

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRAYIFYRLVKNTLLTAFILSLILLTLQLTRLSNVLFGIPFKDFMGFLVVWNAYYTYFF
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHEEE
IPEGVILSTFFLMKHFKDKKLLHVFYSFRISDFRIFLYCSIPFLTFFLISALLSNTLLEE
CCCHHHHHHHHHHHHHCCHHHHHHHHHHHHCCEEEEEEECHHHHHHHHHHHHHHHHHHHH
KVAFTRKNMLFKLQEKFFSEVPAGTFVSFGAVVLHAEKREGNTLKEAFFKFGDITVLSEY
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHEEEECCCCCCHHHHHHHHHCCHHHHHHH
LKYKGNGVFEFRRGTVITEEENYFVVKFNEYTLNLKQFQKKKLREKRLKESKVVNYVNVA
HHHCCCCEEEEECCEEEEECCCEEEEEEECEEECHHHHHHHHHHHHHHHHHHHHHHHHHH
TLPLFFFLSFTVALKFCHGGLSYYAFASLFIVVHQLIIFVVKLML
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
>Mature Secondary Structure
MLRAYIFYRLVKNTLLTAFILSLILLTLQLTRLSNVLFGIPFKDFMGFLVVWNAYYTYFF
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHEEE
IPEGVILSTFFLMKHFKDKKLLHVFYSFRISDFRIFLYCSIPFLTFFLISALLSNTLLEE
CCCHHHHHHHHHHHHHCCHHHHHHHHHHHHCCEEEEEEECHHHHHHHHHHHHHHHHHHHH
KVAFTRKNMLFKLQEKFFSEVPAGTFVSFGAVVLHAEKREGNTLKEAFFKFGDITVLSEY
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHEEEECCCCCCHHHHHHHHHCCHHHHHHH
LKYKGNGVFEFRRGTVITEEENYFVVKFNEYTLNLKQFQKKKLREKRLKESKVVNYVNVA
HHHCCCCEEEEECCEEEEECCCEEEEEEECEEECHHHHHHHHHHHHHHHHHHHHHHHHHH
TLPLFFFLSFTVALKFCHGGLSYYAFASLFIVVHQLIIFVVKLML
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9537320