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The map label for this gene is dedF [C]

Identifier: 15605994

GI number: 15605994

Start: 358695

End: 359264

Strand: Direct

Name: dedF [C]

Synonym: aq_528

Alternate gene names: 15605994

Gene position: 358695-359264 (Clockwise)

Preceding gene: 15605993

Following gene: 15605996

Centisome position: 23.12

GC content: 43.86

Gene sequence:

>570_bases
ATGCAGAAGATAGCCCTCTGTATTACGGGTGCAAGCGGAGTAATATACGGGATAAAACTCCTGCAAGTATTGGAGGAGTT
AGATTTTTCAGTAGACTTGGTAATTTCAAGGAACGCAAAAGTAGTATTAAAGGAAGAGCACTCTTTAACCTTCGAAGAGG
TTCTTAAAGGTCTCAAAAACGTCCGTATTCACGAGGAGAATGACTTTACCTCACCTCTCGCGAGCGGCTCAAGGCTTGTC
CATTACAGGGGTGTTTACGTAGTTCCCTGTTCCACGAATACGTTATCCTGCATAGCAAACGGCATAAACAAAAACCTTAT
TCACAGAGTAGGGGAGGTGGCCCTGAAGGAGAGAGTTCCCTTGGTTTTGCTCGTTAGAGAAGCTCCGTACAACGAGATAC
ACCTTGAAAACATGCTAAAAATTACGAGGATGGGGGGAGTTGTAGTTCCCGCAAGTCCCGCCTTTTATCACAAACCACAA
AGTATAGACGACATGATAAACTTCGTTGTGGGAAAGCTTTTGGACGTTTTGAGGATAGAGCATAATCTTTATAAGAGATG
GAGAGGGTGA

Upstream 100 bases:

>100_bases
TAGGGTGGTCCGACGATGCCCTGATAATAATCCTTCCCGAAAGCGAAGAAAAAATCAGGTTCTTCTTTGAAACCTTCGGA
GGTATCATAGGAAATCTTTT

Downstream 100 bases:

>100_bases
AGTTCAACAGTACGGGAATAAAGGACAAAGAAAAGATTTACGAAATACTGAGAAAGGAAGGGTATTCAGTTTACGAGTGG
TACGATTCTCCCGGAACTTA

Product: phenylacrylic acid decarboxylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 189; Mature: 189

Protein sequence:

>189_residues
MQKIALCITGASGVIYGIKLLQVLEELDFSVDLVISRNAKVVLKEEHSLTFEEVLKGLKNVRIHEENDFTSPLASGSRLV
HYRGVYVVPCSTNTLSCIANGINKNLIHRVGEVALKERVPLVLLVREAPYNEIHLENMLKITRMGGVVVPASPAFYHKPQ
SIDDMINFVVGKLLDVLRIEHNLYKRWRG

Sequences:

>Translated_189_residues
MQKIALCITGASGVIYGIKLLQVLEELDFSVDLVISRNAKVVLKEEHSLTFEEVLKGLKNVRIHEENDFTSPLASGSRLV
HYRGVYVVPCSTNTLSCIANGINKNLIHRVGEVALKERVPLVLLVREAPYNEIHLENMLKITRMGGVVVPASPAFYHKPQ
SIDDMINFVVGKLLDVLRIEHNLYKRWRG
>Mature_189_residues
MQKIALCITGASGVIYGIKLLQVLEELDFSVDLVISRNAKVVLKEEHSLTFEEVLKGLKNVRIHEENDFTSPLASGSRLV
HYRGVYVVPCSTNTLSCIANGINKNLIHRVGEVALKERVPLVLLVREAPYNEIHLENMLKITRMGGVVVPASPAFYHKPQ
SIDDMINFVVGKLLDVLRIEHNLYKRWRG

Specific function: Unknown

COG id: COG0163

COG function: function code H; 3-polyprenyl-4-hydroxybenzoate decarboxylase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the polyprenyl p-hydroxybenzoate / phenylacrylic acid decarboxylases family

Homologues:

Organism=Escherichia coli, GI1788650, Length=192, Percent_Identity=40.625, Blast_Score=146, Evalue=8e-37,
Organism=Saccharomyces cerevisiae, GI6320746, Length=188, Percent_Identity=38.2978723404255, Blast_Score=139, Evalue=3e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): PAAD_AQUAE (O66811)

Other databases:

- EMBL:   AE000657
- PIR:   G70347
- RefSeq:   NP_213371.1
- PDB:   2EJB
- PDBsum:   2EJB
- ProteinModelPortal:   O66811
- SMR:   O66811
- GeneID:   1193229
- GenomeReviews:   AE000657_GR
- KEGG:   aae:aq_528
- NMPDR:   fig|224324.1.peg.386
- HOGENOM:   HBG297290
- OMA:   RIHEEND
- PhylomeDB:   O66811
- BioCyc:   AAEO224324:AQ_528-MONOMER
- InterPro:   IPR003382
- InterPro:   IPR004507
- Gene3D:   G3DSA:3.40.50.1950
- TIGRFAMs:   TIGR00421

Pfam domain/function: PF02441 Flavoprotein; SSF52507 Flavoprotein

EC number: 4.1.1.-

Molecular weight: Translated: 21256; Mature: 21256

Theoretical pI: Translated: 8.81; Mature: 8.81

Prosite motif: NA

Important sites: BINDING 36-36 BINDING 126-126

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQKIALCITGASGVIYGIKLLQVLEELDFSVDLVISRNAKVVLKEEHSLTFEEVLKGLKN
CCEEEEEEECCCHHHHHHHHHHHHHHCCCCEEEEEECCCEEEEECCCCCCHHHHHHHHHC
VRIHEENDFTSPLASGSRLVHYRGVYVVPCSTNTLSCIANGINKNLIHRVGEVALKERVP
CEEECCCCCCCCCCCCCEEEEECCEEEEECCCCHHHHHHHCCCHHHHHHHHHHHHHHCCC
LVLLVREAPYNEIHLENMLKITRMGGVVVPASPAFYHKPQSIDDMINFVVGKLLDVLRIE
EEEEEECCCCCHHHHHHHHHHHHCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
HNLYKRWRG
HHHHHHCCC
>Mature Secondary Structure
MQKIALCITGASGVIYGIKLLQVLEELDFSVDLVISRNAKVVLKEEHSLTFEEVLKGLKN
CCEEEEEEECCCHHHHHHHHHHHHHHCCCCEEEEEECCCEEEEECCCCCCHHHHHHHHHC
VRIHEENDFTSPLASGSRLVHYRGVYVVPCSTNTLSCIANGINKNLIHRVGEVALKERVP
CEEECCCCCCCCCCCCCEEEEECCEEEEECCCCHHHHHHHCCCHHHHHHHHHHHHHHCCC
LVLLVREAPYNEIHLENMLKITRMGGVVVPASPAFYHKPQSIDDMINFVVGKLLDVLRIE
EEEEEECCCCCHHHHHHHHHHHHCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
HNLYKRWRG
HHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Carbon-Carbon Lyases; Carboxy-Lyases [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9537320