Click here to switch to the map view.

The map label for this gene is hdrC [H]

Identifier: 15605900

GI number: 15605900

Start: 270319

End: 271080

Strand: Direct

Name: hdrC [H]

Synonym: aq_398

Alternate gene names: 15605900

Gene position: 270319-271080 (Clockwise)

Preceding gene: 15605899

Following gene: 15605901

Centisome position: 17.42

GC content: 45.28

Gene sequence:

>762_bases
ATGGCTATTCACGAGCGGTCTCTTGTAGAACCGGAGAGAATTTTAAGGAAGGATAGATTAGTTATAGACGGTATAGACGT
TTCAGGAGACTGGAACCTTATAATCCTTCCCAGAACCATAGAAGATTACGACCTTTCCCTTCTCGACGAAATACTCCAGC
AACCGGAAGGAAAGACTATACTCCAGTGTTACCAGTGCTCCTACTGTACCGCATCCTGTCCCGTTCACAATTACTGGGAC
GAGAGGTACAACCCCAGACACTTCATATACCTCGCAAGACTCGGACTCGTGGACGAGCTTCAGAAAAGGGCGGACGTAAT
GTGGAGATGCGTCTCCTGCCACAAGTGTACCCACAGGTGTCCCAAAGGTGTTCTCGTAGAAGAAGTTCTCAAGGCTATAT
TGAAAGTTCTCTCCAAGAGGGGACTCATAGAAGAGTATCCTTCCAAGAAGTTTGACAAATTCTTCCTTGAACAGGTTTAC
GAGTACGGAAGGATTGAAGACGGAGACCTGCTCTTCGGATGGATAGAAAAGCAGGGTTACAAAGTGTTCAAAGATCCAAT
ACTCAAGAAGCCCATACCCCTCTTCGGTGAAATTCCCGAGTGGCTCAAAACACTCGCTATAAAACCCATAAAGAACATGA
ACATAGACTTCCTCATACTCAACGCAAAGCACATGCTCATACACCCCAGAACTAAGAACTGGAGCAAGATGAAGCAAGTT
CTCAAGAAAGTATTTGAAGAAGAGGGCGTTACACTTCATTAA

Upstream 100 bases:

>100_bases
TCTTCCCTCCCGCTGGAGTTATGGCGAGGAGGTTGCTCGGGGTTCACGCCCCGATTAGGTATACAGACGTTGAAGAAGTA
TCTTAGAGGAGGTGTGAGAG

Downstream 100 bases:

>100_bases
GGAGGTTGAGAGATGGCAGTACCGGTTCAGTTTAGAAAACCGCCTATGGGCGGTATAGGAAAGAAAGTTGCTTATTACCC
TGGTTGTTCTCTTGAAGGTG

Product: heterodisulfide reductase subunit C

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 253; Mature: 252

Protein sequence:

>253_residues
MAIHERSLVEPERILRKDRLVIDGIDVSGDWNLIILPRTIEDYDLSLLDEILQQPEGKTILQCYQCSYCTASCPVHNYWD
ERYNPRHFIYLARLGLVDELQKRADVMWRCVSCHKCTHRCPKGVLVEEVLKAILKVLSKRGLIEEYPSKKFDKFFLEQVY
EYGRIEDGDLLFGWIEKQGYKVFKDPILKKPIPLFGEIPEWLKTLAIKPIKNMNIDFLILNAKHMLIHPRTKNWSKMKQV
LKKVFEEEGVTLH

Sequences:

>Translated_253_residues
MAIHERSLVEPERILRKDRLVIDGIDVSGDWNLIILPRTIEDYDLSLLDEILQQPEGKTILQCYQCSYCTASCPVHNYWD
ERYNPRHFIYLARLGLVDELQKRADVMWRCVSCHKCTHRCPKGVLVEEVLKAILKVLSKRGLIEEYPSKKFDKFFLEQVY
EYGRIEDGDLLFGWIEKQGYKVFKDPILKKPIPLFGEIPEWLKTLAIKPIKNMNIDFLILNAKHMLIHPRTKNWSKMKQV
LKKVFEEEGVTLH
>Mature_252_residues
AIHERSLVEPERILRKDRLVIDGIDVSGDWNLIILPRTIEDYDLSLLDEILQQPEGKTILQCYQCSYCTASCPVHNYWDE
RYNPRHFIYLARLGLVDELQKRADVMWRCVSCHKCTHRCPKGVLVEEVLKAILKVLSKRGLIEEYPSKKFDKFFLEQVYE
YGRIEDGDLLFGWIEKQGYKVFKDPILKKPIPLFGEIPEWLKTLAIKPIKNMNIDFLILNAKHMLIHPRTKNWSKMKQVL
KKVFEEEGVTLH

Specific function: Part of a complex that catalyzes the reversible reduction of CoM-S-S-CoB to the thiol-coenzymes H-S-CoM (coenzyme M) and H-S-CoB (coenzyme B) [H]

COG id: COG1150

COG function: function code C; Heterodisulfide reductase, subunit C

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR017680
- InterPro:   IPR012285
- InterPro:   IPR009051 [H]

Pfam domain/function: NA

EC number: =1.8.98.1 [H]

Molecular weight: Translated: 29842; Mature: 29711

Theoretical pI: Translated: 8.20; Mature: 8.20

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.2 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
3.2 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAIHERSLVEPERILRKDRLVIDGIDVSGDWNLIILPRTIEDYDLSLLDEILQQPEGKTI
CCCCCCCCCCHHHHHHHCCEEEEEEEECCCCEEEEECCCCCCCCHHHHHHHHHCCCCCHH
LQCYQCSYCTASCPVHNYWDERYNPRHFIYLARLGLVDELQKRADVMWRCVSCHKCTHRC
HHHHHCCCCCCCCCCCHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
PKGVLVEEVLKAILKVLSKRGLIEEYPSKKFDKFFLEQVYEYGRIEDGDLLFGWIEKQGY
CCCHHHHHHHHHHHHHHHHCCCHHHCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEHHCCC
KVFKDPILKKPIPLFGEIPEWLKTLAIKPIKNMNIDFLILNAKHMLIHPRTKNWSKMKQV
HHHHCHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCEEEEECCEEEECCCCCCHHHHHHH
LKKVFEEEGVTLH
HHHHHHHCCCCCC
>Mature Secondary Structure 
AIHERSLVEPERILRKDRLVIDGIDVSGDWNLIILPRTIEDYDLSLLDEILQQPEGKTI
CCCCCCCCCHHHHHHHCCEEEEEEEECCCCEEEEECCCCCCCCHHHHHHHHHCCCCCHH
LQCYQCSYCTASCPVHNYWDERYNPRHFIYLARLGLVDELQKRADVMWRCVSCHKCTHRC
HHHHHCCCCCCCCCCCHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
PKGVLVEEVLKAILKVLSKRGLIEEYPSKKFDKFFLEQVYEYGRIEDGDLLFGWIEKQGY
CCCHHHHHHHHHHHHHHHHCCCHHHCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEHHCCC
KVFKDPILKKPIPLFGEIPEWLKTLAIKPIKNMNIDFLILNAKHMLIHPRTKNWSKMKQV
HHHHCHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCEEEEECCEEEECCCCCCHHHHHHH
LKKVFEEEGVTLH
HHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11930014 [H]