| Definition | Aquifex aeolicus VF5, complete genome. |
|---|---|
| Accession | NC_000918 |
| Length | 1,551,335 |
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The map label for this gene is 15605895
Identifier: 15605895
GI number: 15605895
Start: 266219
End: 266971
Strand: Direct
Name: 15605895
Synonym: aq_391
Alternate gene names: NA
Gene position: 266219-266971 (Clockwise)
Preceding gene: 15605894
Following gene: 15605896
Centisome position: 17.16
GC content: 46.08
Gene sequence:
>753_bases ATGGCTGAGCAAACTCAAGTTCGTAAATATGGATACAACATTCCCATCTCGGAGAAAACTCTCCAAGTTCCATGGGAAGA AAAGGTAAGAGTAATAGAAGAAGTCAAATCAGACTTCAGGTTTAAGGAGTACCTCTTCGGATGTCTCAACTGCGGAGTTT GTACGGCATCCTGCCCATCAAATAGATTCTTCGACTACTCCCCCAGAGAAATAGTTCAGAGATTCCTAGAAAATGACATA GATGTCCTCTATGACATGATGCACGAATACATATGGGCATGCTCCCAATGCTTCACGTGCTGGATAAGGTGTCCATTCGT AAACAACCCCGGCGGACTCGTCATCATAATGAGGGAAGTTGCGGTAAGAAACGCGTTTGAAGCTACTAAGGATCTCCTCA AACCCTACGGAAGAGTTCTCCTCAAAGTTATGACCACGGGTAACCAGCTGTCCGCGGACATGCTACAACCGGACTTCTTC CCCGACTGGGGACCGAAGATGCTTGACAACATGGAAAACCTCAGACCCAAGAGAATGGCTATCCCCTTCGACGTGGGTAA GTCCGTGAAGACGGCTTGGGAAGTATCCCTTCAAACTGCAATAGAGATGTACCAAATATGGAGAGACACGGGAATATTCG AAATGCTCGAAAGACTCGATCCGAACCTCTACAACGTCATAATGGACATAGTTGAAGAAAACGAAGAAAGGTGGGAAGAA CTTATGGAAGAAATGGAGGAGGCTGAGGCTTAA
Upstream 100 bases:
>100_bases TTATAAGAATATTTTTATATGACTATAAAAAAATTTTTTTGATTTCCCTCATCTACTCGTGTAACTTAAAAAGAAGAAAC CTGATCAGGAGGGTTTAGGT
Downstream 100 bases:
>100_bases GCTAATGAGGGGGGTTGGTGCCCCGCTCTTAAAATTAAAACTTTAAGGAGGTGTTGTTATGGCTCACAAATCTAAGAGCC CCTATCTTATGTATCCTGAA
Product: hypothetical protein
Products: NA
Alternate protein names: Heterodisulfide Reductase Subunit HdrC; Metabolism Heterodisulfide Reductase C; Heterodisulfide Reductase Subunit C HdrC; Heterodisulfide Reductase Subunit C-Like Protein
Number of amino acids: Translated: 250; Mature: 249
Protein sequence:
>250_residues MAEQTQVRKYGYNIPISEKTLQVPWEEKVRVIEEVKSDFRFKEYLFGCLNCGVCTASCPSNRFFDYSPREIVQRFLENDI DVLYDMMHEYIWACSQCFTCWIRCPFVNNPGGLVIIMREVAVRNAFEATKDLLKPYGRVLLKVMTTGNQLSADMLQPDFF PDWGPKMLDNMENLRPKRMAIPFDVGKSVKTAWEVSLQTAIEMYQIWRDTGIFEMLERLDPNLYNVIMDIVEENEERWEE LMEEMEEAEA
Sequences:
>Translated_250_residues MAEQTQVRKYGYNIPISEKTLQVPWEEKVRVIEEVKSDFRFKEYLFGCLNCGVCTASCPSNRFFDYSPREIVQRFLENDI DVLYDMMHEYIWACSQCFTCWIRCPFVNNPGGLVIIMREVAVRNAFEATKDLLKPYGRVLLKVMTTGNQLSADMLQPDFF PDWGPKMLDNMENLRPKRMAIPFDVGKSVKTAWEVSLQTAIEMYQIWRDTGIFEMLERLDPNLYNVIMDIVEENEERWEE LMEEMEEAEA >Mature_249_residues AEQTQVRKYGYNIPISEKTLQVPWEEKVRVIEEVKSDFRFKEYLFGCLNCGVCTASCPSNRFFDYSPREIVQRFLENDID VLYDMMHEYIWACSQCFTCWIRCPFVNNPGGLVIIMREVAVRNAFEATKDLLKPYGRVLLKVMTTGNQLSADMLQPDFFP DWGPKMLDNMENLRPKRMAIPFDVGKSVKTAWEVSLQTAIEMYQIWRDTGIFEMLERLDPNLYNVIMDIVEENEERWEEL MEEMEEAEA
Specific function: Unknown
COG id: COG1150
COG function: function code C; Heterodisulfide reductase, subunit C
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29458; Mature: 29327
Theoretical pI: Translated: 4.34; Mature: 4.34
Prosite motif: PS00198 4FE4S_FERREDOXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.2 %Cys (Translated Protein) 5.6 %Met (Translated Protein) 8.8 %Cys+Met (Translated Protein) 3.2 %Cys (Mature Protein) 5.2 %Met (Mature Protein) 8.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEQTQVRKYGYNIPISEKTLQVPWEEKVRVIEEVKSDFRFKEYLFGCLNCGVCTASCPS CCCHHHHHHHCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC NRFFDYSPREIVQRFLENDIDVLYDMMHEYIWACSQCFTCWIRCPFVNNPGGLVIIMREV CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEHHHH AVRNAFEATKDLLKPYGRVLLKVMTTGNQLSADMLQPDFFPDWGPKMLDNMENLRPKRMA HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCHHHHHHHHHCCHHHEE IPFDVGKSVKTAWEVSLQTAIEMYQIWRDTGIFEMLERLDPNLYNVIMDIVEENEERWEE CCHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHCCHHHHHH LMEEMEEAEA HHHHHHHCCC >Mature Secondary Structure AEQTQVRKYGYNIPISEKTLQVPWEEKVRVIEEVKSDFRFKEYLFGCLNCGVCTASCPS CCHHHHHHHCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC NRFFDYSPREIVQRFLENDIDVLYDMMHEYIWACSQCFTCWIRCPFVNNPGGLVIIMREV CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEHHHH AVRNAFEATKDLLKPYGRVLLKVMTTGNQLSADMLQPDFFPDWGPKMLDNMENLRPKRMA HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCHHHHHHHHHCCHHHEE IPFDVGKSVKTAWEVSLQTAIEMYQIWRDTGIFEMLERLDPNLYNVIMDIVEENEERWEE CCHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHCCHHHHHH LMEEMEEAEA HHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA