Definition Aquifex aeolicus VF5, complete genome.
Accession NC_000918
Length 1,551,335

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The map label for this gene is 15605895

Identifier: 15605895

GI number: 15605895

Start: 266219

End: 266971

Strand: Direct

Name: 15605895

Synonym: aq_391

Alternate gene names: NA

Gene position: 266219-266971 (Clockwise)

Preceding gene: 15605894

Following gene: 15605896

Centisome position: 17.16

GC content: 46.08

Gene sequence:

>753_bases
ATGGCTGAGCAAACTCAAGTTCGTAAATATGGATACAACATTCCCATCTCGGAGAAAACTCTCCAAGTTCCATGGGAAGA
AAAGGTAAGAGTAATAGAAGAAGTCAAATCAGACTTCAGGTTTAAGGAGTACCTCTTCGGATGTCTCAACTGCGGAGTTT
GTACGGCATCCTGCCCATCAAATAGATTCTTCGACTACTCCCCCAGAGAAATAGTTCAGAGATTCCTAGAAAATGACATA
GATGTCCTCTATGACATGATGCACGAATACATATGGGCATGCTCCCAATGCTTCACGTGCTGGATAAGGTGTCCATTCGT
AAACAACCCCGGCGGACTCGTCATCATAATGAGGGAAGTTGCGGTAAGAAACGCGTTTGAAGCTACTAAGGATCTCCTCA
AACCCTACGGAAGAGTTCTCCTCAAAGTTATGACCACGGGTAACCAGCTGTCCGCGGACATGCTACAACCGGACTTCTTC
CCCGACTGGGGACCGAAGATGCTTGACAACATGGAAAACCTCAGACCCAAGAGAATGGCTATCCCCTTCGACGTGGGTAA
GTCCGTGAAGACGGCTTGGGAAGTATCCCTTCAAACTGCAATAGAGATGTACCAAATATGGAGAGACACGGGAATATTCG
AAATGCTCGAAAGACTCGATCCGAACCTCTACAACGTCATAATGGACATAGTTGAAGAAAACGAAGAAAGGTGGGAAGAA
CTTATGGAAGAAATGGAGGAGGCTGAGGCTTAA

Upstream 100 bases:

>100_bases
TTATAAGAATATTTTTATATGACTATAAAAAAATTTTTTTGATTTCCCTCATCTACTCGTGTAACTTAAAAAGAAGAAAC
CTGATCAGGAGGGTTTAGGT

Downstream 100 bases:

>100_bases
GCTAATGAGGGGGGTTGGTGCCCCGCTCTTAAAATTAAAACTTTAAGGAGGTGTTGTTATGGCTCACAAATCTAAGAGCC
CCTATCTTATGTATCCTGAA

Product: hypothetical protein

Products: NA

Alternate protein names: Heterodisulfide Reductase Subunit HdrC; Metabolism Heterodisulfide Reductase C; Heterodisulfide Reductase Subunit C HdrC; Heterodisulfide Reductase Subunit C-Like Protein

Number of amino acids: Translated: 250; Mature: 249

Protein sequence:

>250_residues
MAEQTQVRKYGYNIPISEKTLQVPWEEKVRVIEEVKSDFRFKEYLFGCLNCGVCTASCPSNRFFDYSPREIVQRFLENDI
DVLYDMMHEYIWACSQCFTCWIRCPFVNNPGGLVIIMREVAVRNAFEATKDLLKPYGRVLLKVMTTGNQLSADMLQPDFF
PDWGPKMLDNMENLRPKRMAIPFDVGKSVKTAWEVSLQTAIEMYQIWRDTGIFEMLERLDPNLYNVIMDIVEENEERWEE
LMEEMEEAEA

Sequences:

>Translated_250_residues
MAEQTQVRKYGYNIPISEKTLQVPWEEKVRVIEEVKSDFRFKEYLFGCLNCGVCTASCPSNRFFDYSPREIVQRFLENDI
DVLYDMMHEYIWACSQCFTCWIRCPFVNNPGGLVIIMREVAVRNAFEATKDLLKPYGRVLLKVMTTGNQLSADMLQPDFF
PDWGPKMLDNMENLRPKRMAIPFDVGKSVKTAWEVSLQTAIEMYQIWRDTGIFEMLERLDPNLYNVIMDIVEENEERWEE
LMEEMEEAEA
>Mature_249_residues
AEQTQVRKYGYNIPISEKTLQVPWEEKVRVIEEVKSDFRFKEYLFGCLNCGVCTASCPSNRFFDYSPREIVQRFLENDID
VLYDMMHEYIWACSQCFTCWIRCPFVNNPGGLVIIMREVAVRNAFEATKDLLKPYGRVLLKVMTTGNQLSADMLQPDFFP
DWGPKMLDNMENLRPKRMAIPFDVGKSVKTAWEVSLQTAIEMYQIWRDTGIFEMLERLDPNLYNVIMDIVEENEERWEEL
MEEMEEAEA

Specific function: Unknown

COG id: COG1150

COG function: function code C; Heterodisulfide reductase, subunit C

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29458; Mature: 29327

Theoretical pI: Translated: 4.34; Mature: 4.34

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.2 %Cys     (Translated Protein)
5.6 %Met     (Translated Protein)
8.8 %Cys+Met (Translated Protein)
3.2 %Cys     (Mature Protein)
5.2 %Met     (Mature Protein)
8.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAEQTQVRKYGYNIPISEKTLQVPWEEKVRVIEEVKSDFRFKEYLFGCLNCGVCTASCPS
CCCHHHHHHHCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
NRFFDYSPREIVQRFLENDIDVLYDMMHEYIWACSQCFTCWIRCPFVNNPGGLVIIMREV
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEHHHH
AVRNAFEATKDLLKPYGRVLLKVMTTGNQLSADMLQPDFFPDWGPKMLDNMENLRPKRMA
HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCHHHHHHHHHCCHHHEE
IPFDVGKSVKTAWEVSLQTAIEMYQIWRDTGIFEMLERLDPNLYNVIMDIVEENEERWEE
CCHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHCCHHHHHH
LMEEMEEAEA
HHHHHHHCCC
>Mature Secondary Structure 
AEQTQVRKYGYNIPISEKTLQVPWEEKVRVIEEVKSDFRFKEYLFGCLNCGVCTASCPS
CCHHHHHHHCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
NRFFDYSPREIVQRFLENDIDVLYDMMHEYIWACSQCFTCWIRCPFVNNPGGLVIIMREV
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEHHHH
AVRNAFEATKDLLKPYGRVLLKVMTTGNQLSADMLQPDFFPDWGPKMLDNMENLRPKRMA
HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCHHHHHHHHHCCHHHEE
IPFDVGKSVKTAWEVSLQTAIEMYQIWRDTGIFEMLERLDPNLYNVIMDIVEENEERWEE
CCHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHCCHHHHHH
LMEEMEEAEA
HHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA