Definition Aquifex aeolicus VF5, complete genome.
Accession NC_000918
Length 1,551,335

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The map label for this gene is dinG [C]

Identifier: 15605867

GI number: 15605867

Start: 234590

End: 236518

Strand: Direct

Name: dinG [C]

Synonym: aq_358

Alternate gene names: 15605867

Gene position: 234590-236518 (Clockwise)

Preceding gene: 15605866

Following gene: 15605868

Centisome position: 15.12

GC content: 42.46

Gene sequence:

>1929_bases
ATGGATTCAATTTCCTTTTACGAGTACCTTCTTACTAAAGGTTTTGAAGAGAGAAAGTCCCAGAGGGAGATGATAAAGAT
AGTGGAAGAGGCACTGGAGGAGGGAGGAGTTAAATTAATAGAAGCTCCCACGGGAACGGGAAAGACCTTCGCTTACTTAA
TTCCCATAATTGTTAATAAACAAAAGGCGATAATCTCTACAGGAACGAAGATTCTTCAGGATCAATTAAAGAGGGACATA
GAGTTTTTAGCCGGTCACTGGAAGCTCTTGACAGGACAGAAGGTAAATTACGCGGTAATAAAGGGAAAGGGAAATTACCT
CTGTATAGACAGGTTTAAGAAAGAAGAAATTCCAGAAGCGGACAGGCTGGAAGTGGAAACCTTTATGGAAACCGAGTGGG
ACGGAGACCTTACTTTAACAGGACTTGCTTCTGAAACTATTGTAAAAATAAACGTTGATGACGATTACTGCACCTTTGCG
TACAGGATGGCGTGTCCCTTTTACAGGGAATGTTATTACTGGGCTAAGGTAAAACGAAGGGAGGAAAACGCTGACATACT
CGTGGTAAACCACTCCCTATTAGCACTCAAAGAGTTTGAGACAAAAGACAAAGTACTCGTCATAGACGAAGCCCACGAGC
TTGACAGGTACTTAACCCTCGCAACGACCTTCGGTATAAGTCTTTACTGGTTTAAGGATCTTCAAAAAAGTCTTGAAAAA
CTTCTGGGAGAAAGTGTAAACATACCCGCGGAAGAATTCTTCAGGAATAACTTTGAAAAGCTCTTTGATGAGGAGAGCAA
CGAGGCAGCCCTTGAAAGCCTGAGAGAGTACATCCCCCAGATGAAAACACTTCTTTACATACCCTTAAATGAGGCTGTGG
AAAAACTCAGGAAGAAAGTCAAAGAAGAAGTGGAGAAATTCGTCAAAGAAACCCTTATGGTCAGCTACACCTTTAAGGAC
TTCCTTGAAAATACCTTGCTCTTTGACAGAGACCTGATTGATTCCGTAAACGCTGGATACGAAGAACCAACGGAAAGAGA
AAAGGAATTAATCAACAAAGTCAAAAAAATAGATTACTACAGGAGGAAGTTAAACAAACTGAAAGCGTTTATAAGGACTG
CCGAAGACGAAGAGGAAGGCGTAGGCTACAAAGTATCAAGGGCTTGGAGTAAAAAACTGAACGGTTATAACTACAGACTT
GAAGCCTTCCTTATATTTCCGAGAAATGTAATAGATCCCGAGGAGTACAAGGCGGTAATCTTAACTTCCGCAACCGTGGA
GCCTGAAGACATATACCTCACAACTGGGATAACCGGGGAGTTTTACACACTTCCCCACAACTATGACTACACAACGTCTA
CCATATTCATAGAGGACACGAACCCAAAAAAGGAAGACTGGAAGGACAAACTCACGACAAATTACTACATCCTCAGGAGC
GAATACGACAAAGTCCTCGTTCTTCTCACGAACAAGGAACACCTGAAGCTTTTCGAAGAAGACGAAGAGGTAGGCATTCA
GGGAAAGGACAGCTTAACGAGGTTGATAGAGTTTTTAAGAAGCGGAAGGATAAAGGCTTTAATTGGACTTGATAGCCTCT
GGACAGGTGTTGACGTAAAGGGAGAGAAAGGTATTCTGATGTCAAAACTCCCCTTTGAAAACCCGAGAGATCCCCTTACG
TACCACAGGCTGAAGTTCTTAGAAAAGGTAGGAGAAGACCCCTTTACATACCAAAGGAGAAAAGCTTACATAAAGTTCAG
ACAAGGAGTGGGGAGACTAATAAGGCAGAACTCCGACAAAGGAAAGATAGTTCTGTGCGACAACAGGATATGGCGATACA
GGGAGTTCGTGGACTTCCTACGTTCCTTAGGAATAAACATAGTGAGTAAGGGCAAGTTCAAGAGAAAGAAGAGAACTCCT
TTCTGGTAG

Upstream 100 bases:

>100_bases
GAAAGTGGTGAAAGGACTGATAGAGTTTTTTACGTAATATAACAAATCCCTTATAAGACTATTACTCATCTTTAAAAAAT
CCTAAATTATATCCTTACCT

Downstream 100 bases:

>100_bases
TATTTCACTAAATGCTGCTTGACAGGTATCTGCTTTCCCGATTTCTCGGAATATTTCTCAACGTAAGTTTTGTGAGCGTT
TTGCTCGTTTCCCTCTACGC

Product: ATP-dependent helicase DinG

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 642; Mature: 642

Protein sequence:

>642_residues
MDSISFYEYLLTKGFEERKSQREMIKIVEEALEEGGVKLIEAPTGTGKTFAYLIPIIVNKQKAIISTGTKILQDQLKRDI
EFLAGHWKLLTGQKVNYAVIKGKGNYLCIDRFKKEEIPEADRLEVETFMETEWDGDLTLTGLASETIVKINVDDDYCTFA
YRMACPFYRECYYWAKVKRREENADILVVNHSLLALKEFETKDKVLVIDEAHELDRYLTLATTFGISLYWFKDLQKSLEK
LLGESVNIPAEEFFRNNFEKLFDEESNEAALESLREYIPQMKTLLYIPLNEAVEKLRKKVKEEVEKFVKETLMVSYTFKD
FLENTLLFDRDLIDSVNAGYEEPTEREKELINKVKKIDYYRRKLNKLKAFIRTAEDEEEGVGYKVSRAWSKKLNGYNYRL
EAFLIFPRNVIDPEEYKAVILTSATVEPEDIYLTTGITGEFYTLPHNYDYTTSTIFIEDTNPKKEDWKDKLTTNYYILRS
EYDKVLVLLTNKEHLKLFEEDEEVGIQGKDSLTRLIEFLRSGRIKALIGLDSLWTGVDVKGEKGILMSKLPFENPRDPLT
YHRLKFLEKVGEDPFTYQRRKAYIKFRQGVGRLIRQNSDKGKIVLCDNRIWRYREFVDFLRSLGINIVSKGKFKRKKRTP
FW

Sequences:

>Translated_642_residues
MDSISFYEYLLTKGFEERKSQREMIKIVEEALEEGGVKLIEAPTGTGKTFAYLIPIIVNKQKAIISTGTKILQDQLKRDI
EFLAGHWKLLTGQKVNYAVIKGKGNYLCIDRFKKEEIPEADRLEVETFMETEWDGDLTLTGLASETIVKINVDDDYCTFA
YRMACPFYRECYYWAKVKRREENADILVVNHSLLALKEFETKDKVLVIDEAHELDRYLTLATTFGISLYWFKDLQKSLEK
LLGESVNIPAEEFFRNNFEKLFDEESNEAALESLREYIPQMKTLLYIPLNEAVEKLRKKVKEEVEKFVKETLMVSYTFKD
FLENTLLFDRDLIDSVNAGYEEPTEREKELINKVKKIDYYRRKLNKLKAFIRTAEDEEEGVGYKVSRAWSKKLNGYNYRL
EAFLIFPRNVIDPEEYKAVILTSATVEPEDIYLTTGITGEFYTLPHNYDYTTSTIFIEDTNPKKEDWKDKLTTNYYILRS
EYDKVLVLLTNKEHLKLFEEDEEVGIQGKDSLTRLIEFLRSGRIKALIGLDSLWTGVDVKGEKGILMSKLPFENPRDPLT
YHRLKFLEKVGEDPFTYQRRKAYIKFRQGVGRLIRQNSDKGKIVLCDNRIWRYREFVDFLRSLGINIVSKGKFKRKKRTP
FW
>Mature_642_residues
MDSISFYEYLLTKGFEERKSQREMIKIVEEALEEGGVKLIEAPTGTGKTFAYLIPIIVNKQKAIISTGTKILQDQLKRDI
EFLAGHWKLLTGQKVNYAVIKGKGNYLCIDRFKKEEIPEADRLEVETFMETEWDGDLTLTGLASETIVKINVDDDYCTFA
YRMACPFYRECYYWAKVKRREENADILVVNHSLLALKEFETKDKVLVIDEAHELDRYLTLATTFGISLYWFKDLQKSLEK
LLGESVNIPAEEFFRNNFEKLFDEESNEAALESLREYIPQMKTLLYIPLNEAVEKLRKKVKEEVEKFVKETLMVSYTFKD
FLENTLLFDRDLIDSVNAGYEEPTEREKELINKVKKIDYYRRKLNKLKAFIRTAEDEEEGVGYKVSRAWSKKLNGYNYRL
EAFLIFPRNVIDPEEYKAVILTSATVEPEDIYLTTGITGEFYTLPHNYDYTTSTIFIEDTNPKKEDWKDKLTTNYYILRS
EYDKVLVLLTNKEHLKLFEEDEEVGIQGKDSLTRLIEFLRSGRIKALIGLDSLWTGVDVKGEKGILMSKLPFENPRDPLT
YHRLKFLEKVGEDPFTYQRRKAYIKFRQGVGRLIRQNSDKGKIVLCDNRIWRYREFVDFLRSLGINIVSKGKFKRKKRTP
FW

Specific function: Unknown

COG id: COG1199

COG function: function code KL; Rad3-related DNA helicases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 helicase C-terminal domain [H]

Homologues:

Organism=Escherichia coli, GI1788110, Length=223, Percent_Identity=35.8744394618834, Blast_Score=125, Evalue=9e-30,
Organism=Escherichia coli, GI1787018, Length=359, Percent_Identity=27.8551532033426, Blast_Score=89, Evalue=7e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014001
- InterPro:   IPR014013
- InterPro:   IPR006555
- InterPro:   IPR001650
- InterPro:   IPR006935 [H]

Pfam domain/function: PF04851 ResIII [H]

EC number: =3.6.4.12 [H]

Molecular weight: Translated: 75418; Mature: 75418

Theoretical pI: Translated: 6.35; Mature: 6.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDSISFYEYLLTKGFEERKSQREMIKIVEEALEEGGVKLIEAPTGTGKTFAYLIPIIVNK
CCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCEEEEHHHCCC
QKAIISTGTKILQDQLKRDIEFLAGHWKLLTGQKVNYAVIKGKGNYLCIDRFKKEEIPEA
CHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCEEEEEEECCCCEEEEECCCHHCCCCC
DRLEVETFMETEWDGDLTLTGLASETIVKINVDDDYCTFAYRMACPFYRECYYWAKVKRR
CCEEHHHHHCCCCCCCEEEEEECCCEEEEEECCCCHHHHHHHHCCHHHHHHHHHHHHHHC
EENADILVVNHSLLALKEFETKDKVLVIDEAHELDRYLTLATTFGISLYWFKDLQKSLEK
CCCCCEEEEECCCHHHHHCCCCCCEEEEECHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
LLGESVNIPAEEFFRNNFEKLFDEESNEAALESLREYIPQMKTLLYIPLNEAVEKLRKKV
HCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHEEEEEHHHHHHHHHHHH
KEEVEKFVKETLMVSYTFKDFLENTLLFDRDLIDSVNAGYEEPTEREKELINKVKKIDYY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH
RRKLNKLKAFIRTAEDEEEGVGYKVSRAWSKKLNGYNYRLEAFLIFPRNVIDPEEYKAVI
HHHHHHHHHHHHCCCCCCCCCCEEEHHHHHHCCCCCCEEEEEEEEECCCCCCCCCCCEEE
LTSATVEPEDIYLTTGITGEFYTLPHNYDYTTSTIFIEDTNPKKEDWKDKLTTNYYILRS
EEECCCCCCCEEEEECCCCEEEECCCCCCCCEEEEEEECCCCCHHHHHHHCCCCEEEEEE
EYDKVLVLLTNKEHLKLFEEDEEVGIQGKDSLTRLIEFLRSGRIKALIGLDSLWTGVDVK
CCCEEEEEEECHHHHHEECCCCCCCCCCHHHHHHHHHHHHCCCEEEEEECHHHHCCCCCC
GEKGILMSKLPFENPRDPLTYHRLKFLEKVGEDPFTYQRRKAYIKFRQGVGRLIRQNSDK
CCCCCEEECCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC
GKIVLCDNRIWRYREFVDFLRSLGINIVSKGKFKRKKRTPFW
CCEEEECCCHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCC
>Mature Secondary Structure
MDSISFYEYLLTKGFEERKSQREMIKIVEEALEEGGVKLIEAPTGTGKTFAYLIPIIVNK
CCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCEEEEHHHCCC
QKAIISTGTKILQDQLKRDIEFLAGHWKLLTGQKVNYAVIKGKGNYLCIDRFKKEEIPEA
CHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCEEEEEEECCCCEEEEECCCHHCCCCC
DRLEVETFMETEWDGDLTLTGLASETIVKINVDDDYCTFAYRMACPFYRECYYWAKVKRR
CCEEHHHHHCCCCCCCEEEEEECCCEEEEEECCCCHHHHHHHHCCHHHHHHHHHHHHHHC
EENADILVVNHSLLALKEFETKDKVLVIDEAHELDRYLTLATTFGISLYWFKDLQKSLEK
CCCCCEEEEECCCHHHHHCCCCCCEEEEECHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
LLGESVNIPAEEFFRNNFEKLFDEESNEAALESLREYIPQMKTLLYIPLNEAVEKLRKKV
HCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHEEEEEHHHHHHHHHHHH
KEEVEKFVKETLMVSYTFKDFLENTLLFDRDLIDSVNAGYEEPTEREKELINKVKKIDYY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH
RRKLNKLKAFIRTAEDEEEGVGYKVSRAWSKKLNGYNYRLEAFLIFPRNVIDPEEYKAVI
HHHHHHHHHHHHCCCCCCCCCCEEEHHHHHHCCCCCCEEEEEEEEECCCCCCCCCCCEEE
LTSATVEPEDIYLTTGITGEFYTLPHNYDYTTSTIFIEDTNPKKEDWKDKLTTNYYILRS
EEECCCCCCCEEEEECCCCEEEECCCCCCCCEEEEEEECCCCCHHHHHHHCCCCEEEEEE
EYDKVLVLLTNKEHLKLFEEDEEVGIQGKDSLTRLIEFLRSGRIKALIGLDSLWTGVDVK
CCCEEEEEEECHHHHHEECCCCCCCCCCHHHHHHHHHHHHCCCEEEEEECHHHHCCCCCC
GEKGILMSKLPFENPRDPLTYHRLKFLEKVGEDPFTYQRRKAYIKFRQGVGRLIRQNSDK
CCCCCEEECCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC
GKIVLCDNRIWRYREFVDFLRSLGINIVSKGKFKRKKRTPFW
CCEEEECCCHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]