| Definition | Aquifex aeolicus VF5, complete genome. |
|---|---|
| Accession | NC_000918 |
| Length | 1,551,335 |
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The map label for this gene is dinG [C]
Identifier: 15605867
GI number: 15605867
Start: 234590
End: 236518
Strand: Direct
Name: dinG [C]
Synonym: aq_358
Alternate gene names: 15605867
Gene position: 234590-236518 (Clockwise)
Preceding gene: 15605866
Following gene: 15605868
Centisome position: 15.12
GC content: 42.46
Gene sequence:
>1929_bases ATGGATTCAATTTCCTTTTACGAGTACCTTCTTACTAAAGGTTTTGAAGAGAGAAAGTCCCAGAGGGAGATGATAAAGAT AGTGGAAGAGGCACTGGAGGAGGGAGGAGTTAAATTAATAGAAGCTCCCACGGGAACGGGAAAGACCTTCGCTTACTTAA TTCCCATAATTGTTAATAAACAAAAGGCGATAATCTCTACAGGAACGAAGATTCTTCAGGATCAATTAAAGAGGGACATA GAGTTTTTAGCCGGTCACTGGAAGCTCTTGACAGGACAGAAGGTAAATTACGCGGTAATAAAGGGAAAGGGAAATTACCT CTGTATAGACAGGTTTAAGAAAGAAGAAATTCCAGAAGCGGACAGGCTGGAAGTGGAAACCTTTATGGAAACCGAGTGGG ACGGAGACCTTACTTTAACAGGACTTGCTTCTGAAACTATTGTAAAAATAAACGTTGATGACGATTACTGCACCTTTGCG TACAGGATGGCGTGTCCCTTTTACAGGGAATGTTATTACTGGGCTAAGGTAAAACGAAGGGAGGAAAACGCTGACATACT CGTGGTAAACCACTCCCTATTAGCACTCAAAGAGTTTGAGACAAAAGACAAAGTACTCGTCATAGACGAAGCCCACGAGC TTGACAGGTACTTAACCCTCGCAACGACCTTCGGTATAAGTCTTTACTGGTTTAAGGATCTTCAAAAAAGTCTTGAAAAA CTTCTGGGAGAAAGTGTAAACATACCCGCGGAAGAATTCTTCAGGAATAACTTTGAAAAGCTCTTTGATGAGGAGAGCAA CGAGGCAGCCCTTGAAAGCCTGAGAGAGTACATCCCCCAGATGAAAACACTTCTTTACATACCCTTAAATGAGGCTGTGG AAAAACTCAGGAAGAAAGTCAAAGAAGAAGTGGAGAAATTCGTCAAAGAAACCCTTATGGTCAGCTACACCTTTAAGGAC TTCCTTGAAAATACCTTGCTCTTTGACAGAGACCTGATTGATTCCGTAAACGCTGGATACGAAGAACCAACGGAAAGAGA AAAGGAATTAATCAACAAAGTCAAAAAAATAGATTACTACAGGAGGAAGTTAAACAAACTGAAAGCGTTTATAAGGACTG CCGAAGACGAAGAGGAAGGCGTAGGCTACAAAGTATCAAGGGCTTGGAGTAAAAAACTGAACGGTTATAACTACAGACTT GAAGCCTTCCTTATATTTCCGAGAAATGTAATAGATCCCGAGGAGTACAAGGCGGTAATCTTAACTTCCGCAACCGTGGA GCCTGAAGACATATACCTCACAACTGGGATAACCGGGGAGTTTTACACACTTCCCCACAACTATGACTACACAACGTCTA CCATATTCATAGAGGACACGAACCCAAAAAAGGAAGACTGGAAGGACAAACTCACGACAAATTACTACATCCTCAGGAGC GAATACGACAAAGTCCTCGTTCTTCTCACGAACAAGGAACACCTGAAGCTTTTCGAAGAAGACGAAGAGGTAGGCATTCA GGGAAAGGACAGCTTAACGAGGTTGATAGAGTTTTTAAGAAGCGGAAGGATAAAGGCTTTAATTGGACTTGATAGCCTCT GGACAGGTGTTGACGTAAAGGGAGAGAAAGGTATTCTGATGTCAAAACTCCCCTTTGAAAACCCGAGAGATCCCCTTACG TACCACAGGCTGAAGTTCTTAGAAAAGGTAGGAGAAGACCCCTTTACATACCAAAGGAGAAAAGCTTACATAAAGTTCAG ACAAGGAGTGGGGAGACTAATAAGGCAGAACTCCGACAAAGGAAAGATAGTTCTGTGCGACAACAGGATATGGCGATACA GGGAGTTCGTGGACTTCCTACGTTCCTTAGGAATAAACATAGTGAGTAAGGGCAAGTTCAAGAGAAAGAAGAGAACTCCT TTCTGGTAG
Upstream 100 bases:
>100_bases GAAAGTGGTGAAAGGACTGATAGAGTTTTTTACGTAATATAACAAATCCCTTATAAGACTATTACTCATCTTTAAAAAAT CCTAAATTATATCCTTACCT
Downstream 100 bases:
>100_bases TATTTCACTAAATGCTGCTTGACAGGTATCTGCTTTCCCGATTTCTCGGAATATTTCTCAACGTAAGTTTTGTGAGCGTT TTGCTCGTTTCCCTCTACGC
Product: ATP-dependent helicase DinG
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 642; Mature: 642
Protein sequence:
>642_residues MDSISFYEYLLTKGFEERKSQREMIKIVEEALEEGGVKLIEAPTGTGKTFAYLIPIIVNKQKAIISTGTKILQDQLKRDI EFLAGHWKLLTGQKVNYAVIKGKGNYLCIDRFKKEEIPEADRLEVETFMETEWDGDLTLTGLASETIVKINVDDDYCTFA YRMACPFYRECYYWAKVKRREENADILVVNHSLLALKEFETKDKVLVIDEAHELDRYLTLATTFGISLYWFKDLQKSLEK LLGESVNIPAEEFFRNNFEKLFDEESNEAALESLREYIPQMKTLLYIPLNEAVEKLRKKVKEEVEKFVKETLMVSYTFKD FLENTLLFDRDLIDSVNAGYEEPTEREKELINKVKKIDYYRRKLNKLKAFIRTAEDEEEGVGYKVSRAWSKKLNGYNYRL EAFLIFPRNVIDPEEYKAVILTSATVEPEDIYLTTGITGEFYTLPHNYDYTTSTIFIEDTNPKKEDWKDKLTTNYYILRS EYDKVLVLLTNKEHLKLFEEDEEVGIQGKDSLTRLIEFLRSGRIKALIGLDSLWTGVDVKGEKGILMSKLPFENPRDPLT YHRLKFLEKVGEDPFTYQRRKAYIKFRQGVGRLIRQNSDKGKIVLCDNRIWRYREFVDFLRSLGINIVSKGKFKRKKRTP FW
Sequences:
>Translated_642_residues MDSISFYEYLLTKGFEERKSQREMIKIVEEALEEGGVKLIEAPTGTGKTFAYLIPIIVNKQKAIISTGTKILQDQLKRDI EFLAGHWKLLTGQKVNYAVIKGKGNYLCIDRFKKEEIPEADRLEVETFMETEWDGDLTLTGLASETIVKINVDDDYCTFA YRMACPFYRECYYWAKVKRREENADILVVNHSLLALKEFETKDKVLVIDEAHELDRYLTLATTFGISLYWFKDLQKSLEK LLGESVNIPAEEFFRNNFEKLFDEESNEAALESLREYIPQMKTLLYIPLNEAVEKLRKKVKEEVEKFVKETLMVSYTFKD FLENTLLFDRDLIDSVNAGYEEPTEREKELINKVKKIDYYRRKLNKLKAFIRTAEDEEEGVGYKVSRAWSKKLNGYNYRL EAFLIFPRNVIDPEEYKAVILTSATVEPEDIYLTTGITGEFYTLPHNYDYTTSTIFIEDTNPKKEDWKDKLTTNYYILRS EYDKVLVLLTNKEHLKLFEEDEEVGIQGKDSLTRLIEFLRSGRIKALIGLDSLWTGVDVKGEKGILMSKLPFENPRDPLT YHRLKFLEKVGEDPFTYQRRKAYIKFRQGVGRLIRQNSDKGKIVLCDNRIWRYREFVDFLRSLGINIVSKGKFKRKKRTP FW >Mature_642_residues MDSISFYEYLLTKGFEERKSQREMIKIVEEALEEGGVKLIEAPTGTGKTFAYLIPIIVNKQKAIISTGTKILQDQLKRDI EFLAGHWKLLTGQKVNYAVIKGKGNYLCIDRFKKEEIPEADRLEVETFMETEWDGDLTLTGLASETIVKINVDDDYCTFA YRMACPFYRECYYWAKVKRREENADILVVNHSLLALKEFETKDKVLVIDEAHELDRYLTLATTFGISLYWFKDLQKSLEK LLGESVNIPAEEFFRNNFEKLFDEESNEAALESLREYIPQMKTLLYIPLNEAVEKLRKKVKEEVEKFVKETLMVSYTFKD FLENTLLFDRDLIDSVNAGYEEPTEREKELINKVKKIDYYRRKLNKLKAFIRTAEDEEEGVGYKVSRAWSKKLNGYNYRL EAFLIFPRNVIDPEEYKAVILTSATVEPEDIYLTTGITGEFYTLPHNYDYTTSTIFIEDTNPKKEDWKDKLTTNYYILRS EYDKVLVLLTNKEHLKLFEEDEEVGIQGKDSLTRLIEFLRSGRIKALIGLDSLWTGVDVKGEKGILMSKLPFENPRDPLT YHRLKFLEKVGEDPFTYQRRKAYIKFRQGVGRLIRQNSDKGKIVLCDNRIWRYREFVDFLRSLGINIVSKGKFKRKKRTP FW
Specific function: Unknown
COG id: COG1199
COG function: function code KL; Rad3-related DNA helicases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 helicase C-terminal domain [H]
Homologues:
Organism=Escherichia coli, GI1788110, Length=223, Percent_Identity=35.8744394618834, Blast_Score=125, Evalue=9e-30, Organism=Escherichia coli, GI1787018, Length=359, Percent_Identity=27.8551532033426, Blast_Score=89, Evalue=7e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014001 - InterPro: IPR014013 - InterPro: IPR006555 - InterPro: IPR001650 - InterPro: IPR006935 [H]
Pfam domain/function: PF04851 ResIII [H]
EC number: =3.6.4.12 [H]
Molecular weight: Translated: 75418; Mature: 75418
Theoretical pI: Translated: 6.35; Mature: 6.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDSISFYEYLLTKGFEERKSQREMIKIVEEALEEGGVKLIEAPTGTGKTFAYLIPIIVNK CCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCEEEEHHHCCC QKAIISTGTKILQDQLKRDIEFLAGHWKLLTGQKVNYAVIKGKGNYLCIDRFKKEEIPEA CHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCEEEEEEECCCCEEEEECCCHHCCCCC DRLEVETFMETEWDGDLTLTGLASETIVKINVDDDYCTFAYRMACPFYRECYYWAKVKRR CCEEHHHHHCCCCCCCEEEEEECCCEEEEEECCCCHHHHHHHHCCHHHHHHHHHHHHHHC EENADILVVNHSLLALKEFETKDKVLVIDEAHELDRYLTLATTFGISLYWFKDLQKSLEK CCCCCEEEEECCCHHHHHCCCCCCEEEEECHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH LLGESVNIPAEEFFRNNFEKLFDEESNEAALESLREYIPQMKTLLYIPLNEAVEKLRKKV HCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHEEEEEHHHHHHHHHHHH KEEVEKFVKETLMVSYTFKDFLENTLLFDRDLIDSVNAGYEEPTEREKELINKVKKIDYY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH RRKLNKLKAFIRTAEDEEEGVGYKVSRAWSKKLNGYNYRLEAFLIFPRNVIDPEEYKAVI HHHHHHHHHHHHCCCCCCCCCCEEEHHHHHHCCCCCCEEEEEEEEECCCCCCCCCCCEEE LTSATVEPEDIYLTTGITGEFYTLPHNYDYTTSTIFIEDTNPKKEDWKDKLTTNYYILRS EEECCCCCCCEEEEECCCCEEEECCCCCCCCEEEEEEECCCCCHHHHHHHCCCCEEEEEE EYDKVLVLLTNKEHLKLFEEDEEVGIQGKDSLTRLIEFLRSGRIKALIGLDSLWTGVDVK CCCEEEEEEECHHHHHEECCCCCCCCCCHHHHHHHHHHHHCCCEEEEEECHHHHCCCCCC GEKGILMSKLPFENPRDPLTYHRLKFLEKVGEDPFTYQRRKAYIKFRQGVGRLIRQNSDK CCCCCEEECCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC GKIVLCDNRIWRYREFVDFLRSLGINIVSKGKFKRKKRTPFW CCEEEECCCHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCC >Mature Secondary Structure MDSISFYEYLLTKGFEERKSQREMIKIVEEALEEGGVKLIEAPTGTGKTFAYLIPIIVNK CCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCEEEEHHHCCC QKAIISTGTKILQDQLKRDIEFLAGHWKLLTGQKVNYAVIKGKGNYLCIDRFKKEEIPEA CHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCEEEEEEECCCCEEEEECCCHHCCCCC DRLEVETFMETEWDGDLTLTGLASETIVKINVDDDYCTFAYRMACPFYRECYYWAKVKRR CCEEHHHHHCCCCCCCEEEEEECCCEEEEEECCCCHHHHHHHHCCHHHHHHHHHHHHHHC EENADILVVNHSLLALKEFETKDKVLVIDEAHELDRYLTLATTFGISLYWFKDLQKSLEK CCCCCEEEEECCCHHHHHCCCCCCEEEEECHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH LLGESVNIPAEEFFRNNFEKLFDEESNEAALESLREYIPQMKTLLYIPLNEAVEKLRKKV HCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHEEEEEHHHHHHHHHHHH KEEVEKFVKETLMVSYTFKDFLENTLLFDRDLIDSVNAGYEEPTEREKELINKVKKIDYY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH RRKLNKLKAFIRTAEDEEEGVGYKVSRAWSKKLNGYNYRLEAFLIFPRNVIDPEEYKAVI HHHHHHHHHHHHCCCCCCCCCCEEEHHHHHHCCCCCCEEEEEEEEECCCCCCCCCCCEEE LTSATVEPEDIYLTTGITGEFYTLPHNYDYTTSTIFIEDTNPKKEDWKDKLTTNYYILRS EEECCCCCCCEEEEECCCCEEEECCCCCCCCEEEEEEECCCCCHHHHHHHCCCCEEEEEE EYDKVLVLLTNKEHLKLFEEDEEVGIQGKDSLTRLIEFLRSGRIKALIGLDSLWTGVDVK CCCEEEEEEECHHHHHEECCCCCCCCCCHHHHHHHHHHHHCCCEEEEEECHHHHCCCCCC GEKGILMSKLPFENPRDPLTYHRLKFLEKVGEDPFTYQRRKAYIKFRQGVGRLIRQNSDK CCCCCEEECCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC GKIVLCDNRIWRYREFVDFLRSLGINIVSKGKFKRKKRTPFW CCEEEECCCHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]