| Definition | Aquifex aeolicus VF5, complete genome. |
|---|---|
| Accession | NC_000918 |
| Length | 1,551,335 |
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The map label for this gene is 15605710
Identifier: 15605710
GI number: 15605710
Start: 79748
End: 80566
Strand: Direct
Name: 15605710
Synonym: aq_127
Alternate gene names: NA
Gene position: 79748-80566 (Clockwise)
Preceding gene: 15605709
Following gene: 15605712
Centisome position: 5.14
GC content: 44.44
Gene sequence:
>819_bases ATGCTCCTTTCCTTTTTAGTTTACGTCCTCGCCTGGGCTTTTCAGGCCTTTACTGGTTTCGGTGCAGGTATTTTCATAGT CGGTATACTCTCCCTTTTTTACGAGCCGAAAACCGTTATAGTTTCCTCAACGGTTGTCAACCTCCTCGGTATAATCTCCA TGCTCCTTTTCCTCGGAAAAATCACGAGACCGAACTTTAAAATCCTATTCCCTTTAATCGCCGGTTCAGTTGCAGGCATA GGTGTAAGTGCAAAGCTCTTAATGGAAATAGACAGAGAAGTCCTGAAGGCTTTAATAGGAGGATTTGTTTTATTTCTGGG GATTTACGACTTTTTAGTTCAGACTAATTCTTTGAAATTTAGGTTAAAGGCATCTCCTTTCGTAGGCGTCTTTACGGGAT TTTTGAGCGGTATCTTTGCGGGACTTATCGGAATGGGAGGACCCCCGCCGGTGGTTTACCTGAACCAGGTTTGCAGAGAT TTAAACACTTACAAAATCACCCTCTCCTTCTTTTTTGCCACTAACGTGGTTTTCAGGATAATCTTTTATCTCCTCTACGG AGGAACTGAGTACTGGAGTTACGAACTCATACTTCCCGCCTTTCTGGGAGCACCTCTCGGCGTTTTTGCAGGTATCTACC TTTCACGTTACTTTACTCCTTACTTCGTCAAGAGGTTTATCTCCCTCAGCGTCCTCTCCCTCGGGCTCTTCCTCCTTCTG GAAGGTCTGAAGGAGTTTTCCCACGACTTTTTTAAACACAGTGTAATAGAAGAGAGCCCTTACGGCGGTCTCAAAAGTCA TAAAACCCCAGGGAACTAA
Upstream 100 bases:
>100_bases TAGGGAAAATCTCCAAGATACTTGAAAAGCTAAGACTTGATTTAAAAGAAAAACAAAAGGGAATACTCAAGTTCATCAGA AGGTTGATATTTAGAACTTA
Downstream 100 bases:
>100_bases GGGAGAGTGAATAACCTTAAGCAAAAAGTAAGAAGGGATTATCCTGAATAGCCAGAAGGAGCTTATGTTTACGAAGAGGG GTATATGCGTCTTTCCCATA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 272; Mature: 272
Protein sequence:
>272_residues MLLSFLVYVLAWAFQAFTGFGAGIFIVGILSLFYEPKTVIVSSTVVNLLGIISMLLFLGKITRPNFKILFPLIAGSVAGI GVSAKLLMEIDREVLKALIGGFVLFLGIYDFLVQTNSLKFRLKASPFVGVFTGFLSGIFAGLIGMGGPPPVVYLNQVCRD LNTYKITLSFFFATNVVFRIIFYLLYGGTEYWSYELILPAFLGAPLGVFAGIYLSRYFTPYFVKRFISLSVLSLGLFLLL EGLKEFSHDFFKHSVIEESPYGGLKSHKTPGN
Sequences:
>Translated_272_residues MLLSFLVYVLAWAFQAFTGFGAGIFIVGILSLFYEPKTVIVSSTVVNLLGIISMLLFLGKITRPNFKILFPLIAGSVAGI GVSAKLLMEIDREVLKALIGGFVLFLGIYDFLVQTNSLKFRLKASPFVGVFTGFLSGIFAGLIGMGGPPPVVYLNQVCRD LNTYKITLSFFFATNVVFRIIFYLLYGGTEYWSYELILPAFLGAPLGVFAGIYLSRYFTPYFVKRFISLSVLSLGLFLLL EGLKEFSHDFFKHSVIEESPYGGLKSHKTPGN >Mature_272_residues MLLSFLVYVLAWAFQAFTGFGAGIFIVGILSLFYEPKTVIVSSTVVNLLGIISMLLFLGKITRPNFKILFPLIAGSVAGI GVSAKLLMEIDREVLKALIGGFVLFLGIYDFLVQTNSLKFRLKASPFVGVFTGFLSGIFAGLIGMGGPPPVVYLNQVCRD LNTYKITLSFFFATNVVFRIIFYLLYGGTEYWSYELILPAFLGAPLGVFAGIYLSRYFTPYFVKRFISLSVLSLGLFLLL EGLKEFSHDFFKHSVIEESPYGGLKSHKTPGN
Specific function: Unknown
COG id: COG0730
COG function: function code R; Predicted permeases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30084; Mature: 30084
Theoretical pI: Translated: 9.75; Mature: 9.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLSFLVYVLAWAFQAFTGFGAGIFIVGILSLFYEPKTVIVSSTVVNLLGIISMLLFLGK CHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH ITRPNFKILFPLIAGSVAGIGVSAKLLMEIDREVLKALIGGFVLFLGIYDFLVQTNSLKF CCCCCHHEHHHHHHCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEE RLKASPFVGVFTGFLSGIFAGLIGMGGPPPVVYLNQVCRDLNTYKITLSFFFATNVVFRI EEECCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCHHEEHHHHHHHHHHHHHH IFYLLYGGTEYWSYELILPAFLGAPLGVFAGIYLSRYFTPYFVKRFISLSVLSLGLFLLL HHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH EGLKEFSHDFFKHSVIEESPYGGLKSHKTPGN HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure MLLSFLVYVLAWAFQAFTGFGAGIFIVGILSLFYEPKTVIVSSTVVNLLGIISMLLFLGK CHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH ITRPNFKILFPLIAGSVAGIGVSAKLLMEIDREVLKALIGGFVLFLGIYDFLVQTNSLKF CCCCCHHEHHHHHHCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEE RLKASPFVGVFTGFLSGIFAGLIGMGGPPPVVYLNQVCRDLNTYKITLSFFFATNVVFRI EEECCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCHHEEHHHHHHHHHHHHHH IFYLLYGGTEYWSYELILPAFLGAPLGVFAGIYLSRYFTPYFVKRFISLSVLSLGLFLLL HHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH EGLKEFSHDFFKHSVIEESPYGGLKSHKTPGN HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA