Definition Aquifex aeolicus VF5, complete genome.
Accession NC_000918
Length 1,551,335

Click here to switch to the map view.

The map label for this gene is 15605656

Identifier: 15605656

GI number: 15605656

Start: 38395

End: 38922

Strand: Direct

Name: 15605656

Synonym: aq_059

Alternate gene names: NA

Gene position: 38395-38922 (Clockwise)

Preceding gene: 15605655

Following gene: 15605658

Centisome position: 2.47

GC content: 50.19

Gene sequence:

>528_bases
GTGGCCGAACGCTTCAATATTCCCATGTCCGTTGTACTTGTGAGAAAGCTGGGACTTCCCTGGAACGAGGAGGCTGGTTT
TGGTGCGATAGACCCAGACGGGACTCCTTACTACGATAAGAGCGTCTTATCCTACCTTTCGGAAGAAGATATTAAACAGG
TAGTTGAAAAGGAATTAAAGGAACTGAGGGAAAGGGAGAGGAAATTCGTCCCAAGGGGTTATCCGGATTTGAGGGGAAGG
CAGGTGATAATCGTTGACGACGGGGTAGCCACGGGCTACACGGCAATAGCCGCGGCAAACTGGGCAAAGAAAAAGGGAGC
ATCTGAGGTGATAATAGCGGTTCCCGTTTGTCCTTCGGACGCAAAGGAGAGACTGGAAAGGTACGCGGACAAGTTCGTGT
GTTACTACTCCTCCGACGCACCTTCTTTCGCGGTGGGTATGTTTTATCGGGACTTCCACCAGCTTTCAGACGAGGAGGCA
AAAGAGTACTTAAGGAGGGCGGAAGAAAAAGGGCTTTTAGAACCTTAA

Upstream 100 bases:

>100_bases
CGGGAGAATTATTAGCCGAAGCTCTGGAGGGAATTATTGACGGAGAGAAGAACCCTGTAATTCTCGCAATACCGAGGGGA
GAATTCCGGTAGCATACAAA

Downstream 100 bases:

>100_bases
TTACTTTTTAGGTCTGAAGGCTTTTACTTTATTCGGATCAGTGTCTATATATGCCCCGCCTATAAGGTCTATACAGTAGG
GAATTGCAGGCATTACGGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 175; Mature: 174

Protein sequence:

>175_residues
MAERFNIPMSVVLVRKLGLPWNEEAGFGAIDPDGTPYYDKSVLSYLSEEDIKQVVEKELKELRERERKFVPRGYPDLRGR
QVIIVDDGVATGYTAIAAANWAKKKGASEVIIAVPVCPSDAKERLERYADKFVCYYSSDAPSFAVGMFYRDFHQLSDEEA
KEYLRRAEEKGLLEP

Sequences:

>Translated_175_residues
MAERFNIPMSVVLVRKLGLPWNEEAGFGAIDPDGTPYYDKSVLSYLSEEDIKQVVEKELKELRERERKFVPRGYPDLRGR
QVIIVDDGVATGYTAIAAANWAKKKGASEVIIAVPVCPSDAKERLERYADKFVCYYSSDAPSFAVGMFYRDFHQLSDEEA
KEYLRRAEEKGLLEP
>Mature_174_residues
AERFNIPMSVVLVRKLGLPWNEEAGFGAIDPDGTPYYDKSVLSYLSEEDIKQVVEKELKELRERERKFVPRGYPDLRGRQ
VIIVDDGVATGYTAIAAANWAKKKGASEVIIAVPVCPSDAKERLERYADKFVCYYSSDAPSFAVGMFYRDFHQLSDEEAK
EYLRRAEEKGLLEP

Specific function: Unknown

COG id: COG1926

COG function: function code R; Predicted phosphoribosyltransferases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: In the C-terminal section; belongs to the dienelactone hydrolase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002925
- InterPro:   IPR000836 [H]

Pfam domain/function: PF01738 DLH; PF00156 Pribosyltran [H]

EC number: NA

Molecular weight: Translated: 19892; Mature: 19761

Theoretical pI: Translated: 4.86; Mature: 4.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAERFNIPMSVVLVRKLGLPWNEEAGFGAIDPDGTPYYDKSVLSYLSEEDIKQVVEKELK
CCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHH
ELRERERKFVPRGYPDLRGRQVIIVDDGVATGYTAIAAANWAKKKGASEVIIAVPVCPSD
HHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCH
AKERLERYADKFVCYYSSDAPSFAVGMFYRDFHQLSDEEAKEYLRRAEEKGLLEP
HHHHHHHHHHHEEEEECCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
AERFNIPMSVVLVRKLGLPWNEEAGFGAIDPDGTPYYDKSVLSYLSEEDIKQVVEKELK
CCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHH
ELRERERKFVPRGYPDLRGRQVIIVDDGVATGYTAIAAANWAKKKGASEVIIAVPVCPSD
HHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCH
AKERLERYADKFVCYYSSDAPSFAVGMFYRDFHQLSDEEAKEYLRRAEEKGLLEP
HHHHHHHHHHHEEEEECCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]