Definition Aquifex aeolicus VF5, complete genome.
Accession NC_000918
Length 1,551,335

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The map label for this gene is sfsA

Identifier: 15605654

GI number: 15605654

Start: 36782

End: 37426

Strand: Direct

Name: sfsA

Synonym: aq_057

Alternate gene names: 15605654

Gene position: 36782-37426 (Clockwise)

Preceding gene: 15605652

Following gene: 15605655

Centisome position: 2.37

GC content: 39.69

Gene sequence:

>645_bases
ATGAAGCTTCCTCCTCTGATGCCCGCCATTTTCGTAAAAAGACTAAATAGATTTGTGGGAAAGGTTTTTTTAAATGGGAA
AATAGAAAGAGCTCTAATCAGGAACACGGGAAGACTTTCTGAGCTCTTAAAATTCGGAAACACTGTTTTTGTTAGGGAAA
AAGAGGGTGGAAAGTACAGGTACGAAATCATACTCGCAAGGGCGGAGAAGAGTCTCGTATGCGTTGAGTCCCACTACGCC
AACAAGATTTTTGAGGAATACATTCGCAGAAATTGGAAATTTAAGGAGCTAAAGAGAGAAGTAAAGCTGGAGAATGAACG
GTTTGATTTCCTTATAGACAACACACTGGTAGAGGTAAAGTCCGTTAACCTGGTAAAAAATGGTGTTGCCATGTTCCCGG
ACGCTCCTACAAAAAGGGGAACGGGACACATAAGGACTTTGATAAAGCTTTCCGATAAGTTCAAACCTCTACTTGTTTTC
GTGGTTCAAAGAAGTGATTTTTTAAGTTTTGAGCCCAACTGCGAAACTGACCCCGAGTTCTGTAAAGCTTACTACGAATA
CGTATCTAAGGGGTTTGAAGTTTTAGTACTGAAGTGTAGAGTTTCTTTGGAAGAGATAAATGTAGTAGAAGTATTTTTCA
CTTAA

Upstream 100 bases:

>100_bases
TCTATTTCAAGGATTTTATCTACTAAGAGAATGGGATACCTGTGCGGAAGTATTTCCATTATCTCTTGAATATCCATAAC
GCTATTTTAACATTTTCAGG

Downstream 100 bases:

>100_bases
CTCCGTGGCGTTTTTCTTTTAGCGTTTTTGAACCTAAAAAAAGCATTACACTTCCAACGATTATTCCAACTATAAGAAGG
ACAATAAATGCCTCTTTCAT

Product: sugar fermentation stimulation protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 214; Mature: 214

Protein sequence:

>214_residues
MKLPPLMPAIFVKRLNRFVGKVFLNGKIERALIRNTGRLSELLKFGNTVFVREKEGGKYRYEIILARAEKSLVCVESHYA
NKIFEEYIRRNWKFKELKREVKLENERFDFLIDNTLVEVKSVNLVKNGVAMFPDAPTKRGTGHIRTLIKLSDKFKPLLVF
VVQRSDFLSFEPNCETDPEFCKAYYEYVSKGFEVLVLKCRVSLEEINVVEVFFT

Sequences:

>Translated_214_residues
MKLPPLMPAIFVKRLNRFVGKVFLNGKIERALIRNTGRLSELLKFGNTVFVREKEGGKYRYEIILARAEKSLVCVESHYA
NKIFEEYIRRNWKFKELKREVKLENERFDFLIDNTLVEVKSVNLVKNGVAMFPDAPTKRGTGHIRTLIKLSDKFKPLLVF
VVQRSDFLSFEPNCETDPEFCKAYYEYVSKGFEVLVLKCRVSLEEINVVEVFFT
>Mature_214_residues
MKLPPLMPAIFVKRLNRFVGKVFLNGKIERALIRNTGRLSELLKFGNTVFVREKEGGKYRYEIILARAEKSLVCVESHYA
NKIFEEYIRRNWKFKELKREVKLENERFDFLIDNTLVEVKSVNLVKNGVAMFPDAPTKRGTGHIRTLIKLSDKFKPLLVF
VVQRSDFLSFEPNCETDPEFCKAYYEYVSKGFEVLVLKCRVSLEEINVVEVFFT

Specific function: Probable Regulatory Factor Involved In Maltose Metabolism. [C]

COG id: COG1489

COG function: function code R; DNA-binding protein, stimulates sugar fermentation

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sfsA family

Homologues:

Organism=Escherichia coli, GI1786340, Length=219, Percent_Identity=29.6803652968037, Blast_Score=91, Evalue=8e-20,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): SFSA_AQUAE (O66469)

Other databases:

- EMBL:   AE000657
- PIR:   B70305
- RefSeq:   NP_213029.1
- GeneID:   1192482
- GenomeReviews:   AE000657_GR
- KEGG:   aae:aq_057
- NMPDR:   fig|224324.1.peg.44
- HOGENOM:   HBG655520
- OMA:   GARHMEE
- PhylomeDB:   O66469
- ProtClustDB:   CLSK2299273
- BioCyc:   AAEO224324:AQ_057-MONOMER
- HAMAP:   MF_00095
- InterPro:   IPR005224
- TIGRFAMs:   TIGR00230

Pfam domain/function: PF03749 SfsA

EC number: NA

Molecular weight: Translated: 25060; Mature: 25060

Theoretical pI: Translated: 9.90; Mature: 9.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLPPLMPAIFVKRLNRFVGKVFLNGKIERALIRNTGRLSELLKFGNTVFVREKEGGKYR
CCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHCCCEEEEEECCCCEEE
YEIILARAEKSLVCVESHYANKIFEEYIRRNWKFKELKREVKLENERFDFLIDNTLVEVK
EEEEEEECCCCEEEEHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCEEEEECCHHEEHH
SVNLVKNGVAMFPDAPTKRGTGHIRTLIKLSDKFKPLLVFVVQRSDFLSFEPNCETDPEF
HHHHHHCCEEECCCCCCCCCCHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCHHH
CKAYYEYVSKGFEVLVLKCRVSLEEINVVEVFFT
HHHHHHHHHCCHHEEEEEEECCHHHCCEEEEEEC
>Mature Secondary Structure
MKLPPLMPAIFVKRLNRFVGKVFLNGKIERALIRNTGRLSELLKFGNTVFVREKEGGKYR
CCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHCCCEEEEEECCCCEEE
YEIILARAEKSLVCVESHYANKIFEEYIRRNWKFKELKREVKLENERFDFLIDNTLVEVK
EEEEEEECCCCEEEEHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCEEEEECCHHEEHH
SVNLVKNGVAMFPDAPTKRGTGHIRTLIKLSDKFKPLLVFVVQRSDFLSFEPNCETDPEF
HHHHHHCCEEECCCCCCCCCCHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCHHH
CKAYYEYVSKGFEVLVLKCRVSLEEINVVEVFFT
HHHHHHHHHCCHHEEEEEEECCHHHCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9537320