| Definition | Aquifex aeolicus VF5, complete genome. |
|---|---|
| Accession | NC_000918 |
| Length | 1,551,335 |
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The map label for this gene is sfsA
Identifier: 15605654
GI number: 15605654
Start: 36782
End: 37426
Strand: Direct
Name: sfsA
Synonym: aq_057
Alternate gene names: 15605654
Gene position: 36782-37426 (Clockwise)
Preceding gene: 15605652
Following gene: 15605655
Centisome position: 2.37
GC content: 39.69
Gene sequence:
>645_bases ATGAAGCTTCCTCCTCTGATGCCCGCCATTTTCGTAAAAAGACTAAATAGATTTGTGGGAAAGGTTTTTTTAAATGGGAA AATAGAAAGAGCTCTAATCAGGAACACGGGAAGACTTTCTGAGCTCTTAAAATTCGGAAACACTGTTTTTGTTAGGGAAA AAGAGGGTGGAAAGTACAGGTACGAAATCATACTCGCAAGGGCGGAGAAGAGTCTCGTATGCGTTGAGTCCCACTACGCC AACAAGATTTTTGAGGAATACATTCGCAGAAATTGGAAATTTAAGGAGCTAAAGAGAGAAGTAAAGCTGGAGAATGAACG GTTTGATTTCCTTATAGACAACACACTGGTAGAGGTAAAGTCCGTTAACCTGGTAAAAAATGGTGTTGCCATGTTCCCGG ACGCTCCTACAAAAAGGGGAACGGGACACATAAGGACTTTGATAAAGCTTTCCGATAAGTTCAAACCTCTACTTGTTTTC GTGGTTCAAAGAAGTGATTTTTTAAGTTTTGAGCCCAACTGCGAAACTGACCCCGAGTTCTGTAAAGCTTACTACGAATA CGTATCTAAGGGGTTTGAAGTTTTAGTACTGAAGTGTAGAGTTTCTTTGGAAGAGATAAATGTAGTAGAAGTATTTTTCA CTTAA
Upstream 100 bases:
>100_bases TCTATTTCAAGGATTTTATCTACTAAGAGAATGGGATACCTGTGCGGAAGTATTTCCATTATCTCTTGAATATCCATAAC GCTATTTTAACATTTTCAGG
Downstream 100 bases:
>100_bases CTCCGTGGCGTTTTTCTTTTAGCGTTTTTGAACCTAAAAAAAGCATTACACTTCCAACGATTATTCCAACTATAAGAAGG ACAATAAATGCCTCTTTCAT
Product: sugar fermentation stimulation protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 214; Mature: 214
Protein sequence:
>214_residues MKLPPLMPAIFVKRLNRFVGKVFLNGKIERALIRNTGRLSELLKFGNTVFVREKEGGKYRYEIILARAEKSLVCVESHYA NKIFEEYIRRNWKFKELKREVKLENERFDFLIDNTLVEVKSVNLVKNGVAMFPDAPTKRGTGHIRTLIKLSDKFKPLLVF VVQRSDFLSFEPNCETDPEFCKAYYEYVSKGFEVLVLKCRVSLEEINVVEVFFT
Sequences:
>Translated_214_residues MKLPPLMPAIFVKRLNRFVGKVFLNGKIERALIRNTGRLSELLKFGNTVFVREKEGGKYRYEIILARAEKSLVCVESHYA NKIFEEYIRRNWKFKELKREVKLENERFDFLIDNTLVEVKSVNLVKNGVAMFPDAPTKRGTGHIRTLIKLSDKFKPLLVF VVQRSDFLSFEPNCETDPEFCKAYYEYVSKGFEVLVLKCRVSLEEINVVEVFFT >Mature_214_residues MKLPPLMPAIFVKRLNRFVGKVFLNGKIERALIRNTGRLSELLKFGNTVFVREKEGGKYRYEIILARAEKSLVCVESHYA NKIFEEYIRRNWKFKELKREVKLENERFDFLIDNTLVEVKSVNLVKNGVAMFPDAPTKRGTGHIRTLIKLSDKFKPLLVF VVQRSDFLSFEPNCETDPEFCKAYYEYVSKGFEVLVLKCRVSLEEINVVEVFFT
Specific function: Probable Regulatory Factor Involved In Maltose Metabolism. [C]
COG id: COG1489
COG function: function code R; DNA-binding protein, stimulates sugar fermentation
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the sfsA family
Homologues:
Organism=Escherichia coli, GI1786340, Length=219, Percent_Identity=29.6803652968037, Blast_Score=91, Evalue=8e-20,
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): SFSA_AQUAE (O66469)
Other databases:
- EMBL: AE000657 - PIR: B70305 - RefSeq: NP_213029.1 - GeneID: 1192482 - GenomeReviews: AE000657_GR - KEGG: aae:aq_057 - NMPDR: fig|224324.1.peg.44 - HOGENOM: HBG655520 - OMA: GARHMEE - PhylomeDB: O66469 - ProtClustDB: CLSK2299273 - BioCyc: AAEO224324:AQ_057-MONOMER - HAMAP: MF_00095 - InterPro: IPR005224 - TIGRFAMs: TIGR00230
Pfam domain/function: PF03749 SfsA
EC number: NA
Molecular weight: Translated: 25060; Mature: 25060
Theoretical pI: Translated: 9.90; Mature: 9.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLPPLMPAIFVKRLNRFVGKVFLNGKIERALIRNTGRLSELLKFGNTVFVREKEGGKYR CCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHCCCEEEEEECCCCEEE YEIILARAEKSLVCVESHYANKIFEEYIRRNWKFKELKREVKLENERFDFLIDNTLVEVK EEEEEEECCCCEEEEHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCEEEEECCHHEEHH SVNLVKNGVAMFPDAPTKRGTGHIRTLIKLSDKFKPLLVFVVQRSDFLSFEPNCETDPEF HHHHHHCCEEECCCCCCCCCCHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCHHH CKAYYEYVSKGFEVLVLKCRVSLEEINVVEVFFT HHHHHHHHHCCHHEEEEEEECCHHHCCEEEEEEC >Mature Secondary Structure MKLPPLMPAIFVKRLNRFVGKVFLNGKIERALIRNTGRLSELLKFGNTVFVREKEGGKYR CCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHCCCEEEEEECCCCEEE YEIILARAEKSLVCVESHYANKIFEEYIRRNWKFKELKREVKLENERFDFLIDNTLVEVK EEEEEEECCCCEEEEHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCEEEEECCHHEEHH SVNLVKNGVAMFPDAPTKRGTGHIRTLIKLSDKFKPLLVFVVQRSDFLSFEPNCETDPEF HHHHHHCCEEECCCCCCCCCCHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCHHH CKAYYEYVSKGFEVLVLKCRVSLEEINVVEVFFT HHHHHHHHHCCHHEEEEEEECCHHHCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9537320