| Definition | Pasteurella multocida subsp. multocida str. Pm70, complete genome. |
|---|---|
| Accession | NC_002663 |
| Length | 2,257,487 |
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The map label for this gene is 15603802
Identifier: 15603802
GI number: 15603802
Start: 2173746
End: 2174291
Strand: Direct
Name: 15603802
Synonym: PM1937
Alternate gene names: NA
Gene position: 2173746-2174291 (Clockwise)
Preceding gene: 15603799
Following gene: 15603805
Centisome position: 96.29
GC content: 41.94
Gene sequence:
>546_bases TTGTTGTTCAGCCCTTACCGTTTTATGCAAATACGCCTCAAAACCGTTTTTCACGTTGGCTTGTGGTTGAAGTTGCTGAA TATCTTTATCCGTTCCACCCAAACGACTGCCACCGTGACCAACCACCGGCACAATATTTTTCCCACTAAAGTCTACTTGC TCGAGCAAAGAATAAAGCGCCATTGGCATTTTGTACCACCAAATCGGATAGACCAAAAATACCGTATCTACATCGGTTAT CATGCCAAGACAAGTGAAATCGTGGCATTTGTTTGGGGCAAACGTGATTTGCAAACCGCTTTGGCTTTAAAGCAGCGTTT AAAAGAACTCAAAGTAAGCTATGAACGTATTGCCGGCGATAATTGGGATGCTTTTGTAAATGCGTTTTCTGATACCGGTG ACCAATGGGTGGGTAAGCAACATACTAAAGCGATTGAGGGTAATAACTGTCGGATTCGGCACAGATTAAGCAGAGCCGTC AGGCGCAGTTGCTGTTTTTCCAAATCAATGTTTTATCATGTTAAATCTTTTAATATTGGATTTTAG
Upstream 100 bases:
>100_bases AAAATTGAAATTTAAATGGTAGGGACATACGCTGTGTGTCCCTACATTTTTATTTTGTATAACCATTTTCGGTTAAGAAT TTAGCTAATCTTTTTTCCAC
Downstream 100 bases:
>100_bases GCAATCAATCATCCCAAACAAATTTAACCCAGCACACTTTTCAGGACACCACCAGTAATTTTTTTGAATTGGCGGTGGCG GTGGCGATTTCCTTGTTTGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 181; Mature: 181
Protein sequence:
>181_residues MLFSPYRFMQIRLKTVFHVGLWLKLLNIFIRSTQTTATVTNHRHNIFPTKVYLLEQRIKRHWHFVPPNRIDQKYRIYIGY HAKTSEIVAFVWGKRDLQTALALKQRLKELKVSYERIAGDNWDAFVNAFSDTGDQWVGKQHTKAIEGNNCRIRHRLSRAV RRSCCFSKSMFYHVKSFNIGF
Sequences:
>Translated_181_residues MLFSPYRFMQIRLKTVFHVGLWLKLLNIFIRSTQTTATVTNHRHNIFPTKVYLLEQRIKRHWHFVPPNRIDQKYRIYIGY HAKTSEIVAFVWGKRDLQTALALKQRLKELKVSYERIAGDNWDAFVNAFSDTGDQWVGKQHTKAIEGNNCRIRHRLSRAV RRSCCFSKSMFYHVKSFNIGF >Mature_181_residues MLFSPYRFMQIRLKTVFHVGLWLKLLNIFIRSTQTTATVTNHRHNIFPTKVYLLEQRIKRHWHFVPPNRIDQKYRIYIGY HAKTSEIVAFVWGKRDLQTALALKQRLKELKVSYERIAGDNWDAFVNAFSDTGDQWVGKQHTKAIEGNNCRIRHRLSRAV RRSCCFSKSMFYHVKSFNIGF
Specific function: Unknown
COG id: COG1662
COG function: function code L; Transposase and inactivated derivatives, IS1 family
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21563; Mature: 21563
Theoretical pI: Translated: 11.07; Mature: 11.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLFSPYRFMQIRLKTVFHVGLWLKLLNIFIRSTQTTATVTNHRHNIFPTKVYLLEQRIKR CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHH HWHFVPPNRIDQKYRIYIGYHAKTSEIVAFVWGKRDLQTALALKQRLKELKVSYERIAGD CCCCCCCCCCCCEEEEEEEEECCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCC NWDAFVNAFSDTGDQWVGKQHTKAIEGNNCRIRHRLSRAVRRSCCFSKSMFYHVKSFNIG CHHHHHHHHHCCCCHHCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHEEEEECCCC F C >Mature Secondary Structure MLFSPYRFMQIRLKTVFHVGLWLKLLNIFIRSTQTTATVTNHRHNIFPTKVYLLEQRIKR CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHH HWHFVPPNRIDQKYRIYIGYHAKTSEIVAFVWGKRDLQTALALKQRLKELKVSYERIAGD CCCCCCCCCCCCEEEEEEEEECCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCC NWDAFVNAFSDTGDQWVGKQHTKAIEGNNCRIRHRLSRAVRRSCCFSKSMFYHVKSFNIG CHHHHHHHHHCCCCHHCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHEEEEECCCC F C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA