BacMap

Definition	Pasteurella multocida subsp. multocida str. Pm70, complete genome.
Accession	NC_002663
Length	2,257,487

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The map label for this gene is rhlB

Identifier: 15603786

GI number: 15603786

Start: 2160520

End: 2161791

Strand: Direct

Name: rhlB

Synonym: PM1921

Alternate gene names: 15603786

Gene position: 2160520-2161791 (Clockwise)

Preceding gene: 15603784

Following gene: 15603787

Centisome position: 95.7

GC content: 43.08

Gene sequence:

>1272_bases
ATGCAAAATAATTATTTATCGCAACTTCGTTTTTCTGATTTACCCTTGCACCATCAGGTGCTTGCTGCGTTACAAGAAAA
AGGCTTTGATTACTGTACCCCGATTCAAGCACTTTCTTTGCCAATGAGTTTGGCGGGAAAAGATGTGGCTGGACAAGCAC
AAACCGGTACAGGCAAAACGATGGCATTTTTAACAGCGACCTTTCATCATTTATTAACTCAACAAGGCGATAAAGGGGGA
CGTCAGCCGCGCGCCTTGATTCTTGCACCAACGCGTGAGCTTGCTGTTCAAATCAATAATGATGCAGCGTTACTTACGAA
AGCCACAGGATTAAAAACAGGACTTGCCTATGGCGGTGATGGCTATGAGAAACAACTCAAAGCCATTGAGCAAGGTGTTG
ATATTTTAATTGGTACCACTGGACGTGTGATTGACTATGTGAAACAAGGCATTGTGCGTTTAGACAAAATTCAAGTGGTC
GTGTTAGATGAAGCGGATCGGATGTTTGATCTTGGCTTTATTAAAGATATTCGTTATTTATTGCGTAAATGCCCAGCGCC
ACAACACCGTTTGACCATGCTATTTTCTGCGACCTTATCCTATAAAGTGCGCGAATTGGCGTTTGAGGATATGAATGATC
CGGAATATGTAGAAATTGAACCCTTACAAAAAACGGGACATCGTATTAAAGAAGAACTTTTTTATCCTTCAAACCAAGAT
AAGATGGCGTTGTTGCTCACGTTGTTAGAAGAAGAATGGCCAGAACGTTGCATTATTTTTGCTAACACGAAACATCGTTG
TGAAGACATCTGGGGCTATCTGGCGGCAGATGGTCACCGTGTGGGGCTACTCACTGGCGATGTCGCACAGAAAAAACGGC
TTTCACTGTTGAAGCAATTTACCGAAGGTCATTTGGATATTCTCGTGGCGACCGATGTGGCTGCACGTGGTTTACATATC
TCTGATGTGTCGCATGTGTTTAATTATGATTTGCCAGATGATCGCGAGGACTATGTACACCGTATCGGTCGTACTGGGCG
TGCGGGGGAGAGTGGAGTGTCGATTAGTTTTGCGTGTGAAGAATATGCGATGAATTTGCCCGCAATTGAAGAATATATCT
CACATAGTATTCCTGTCAGTCAATATGATGTGGCGGCGTTATTGACCTTGCCAAAACCGTATCGGATCAAGCGTGGCAAT
AACAACAGCAAAAATAGTGCAAATTCAAACCGCACTTTTCAGAAAAAGCGCAGTCTAAAACGAAACTTTTAA

Upstream 100 bases:

>100_bases
GGTGTTTTTACTAAAAAAGTGAAAAAGTGCGGTCATTTTTTGGGGATTTTATCACTTCGTGCTATTCTTAACGCAATTTT
TCTCACAGATTTATTCTTTT

Downstream 100 bases:

>100_bases
GCCCATTGAAGTCGTGATAGAATTTGCGACTTTTTTATCATGAAGGAAAGCCTATTTTGAATACCTTAGTCGATTTTATT
ATTGATAAATTAGATGATTT

Product: ATP-dependent RNA helicase RhlB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 423; Mature: 423

Protein sequence:

>423_residues
MQNNYLSQLRFSDLPLHHQVLAALQEKGFDYCTPIQALSLPMSLAGKDVAGQAQTGTGKTMAFLTATFHHLLTQQGDKGG
RQPRALILAPTRELAVQINNDAALLTKATGLKTGLAYGGDGYEKQLKAIEQGVDILIGTTGRVIDYVKQGIVRLDKIQVV
VLDEADRMFDLGFIKDIRYLLRKCPAPQHRLTMLFSATLSYKVRELAFEDMNDPEYVEIEPLQKTGHRIKEELFYPSNQD
KMALLLTLLEEEWPERCIIFANTKHRCEDIWGYLAADGHRVGLLTGDVAQKKRLSLLKQFTEGHLDILVATDVAARGLHI
SDVSHVFNYDLPDDREDYVHRIGRTGRAGESGVSISFACEEYAMNLPAIEEYISHSIPVSQYDVAALLTLPKPYRIKRGN
NNSKNSANSNRTFQKKRSLKRNF

Sequences:

>Translated_423_residues
MQNNYLSQLRFSDLPLHHQVLAALQEKGFDYCTPIQALSLPMSLAGKDVAGQAQTGTGKTMAFLTATFHHLLTQQGDKGG
RQPRALILAPTRELAVQINNDAALLTKATGLKTGLAYGGDGYEKQLKAIEQGVDILIGTTGRVIDYVKQGIVRLDKIQVV
VLDEADRMFDLGFIKDIRYLLRKCPAPQHRLTMLFSATLSYKVRELAFEDMNDPEYVEIEPLQKTGHRIKEELFYPSNQD
KMALLLTLLEEEWPERCIIFANTKHRCEDIWGYLAADGHRVGLLTGDVAQKKRLSLLKQFTEGHLDILVATDVAARGLHI
SDVSHVFNYDLPDDREDYVHRIGRTGRAGESGVSISFACEEYAMNLPAIEEYISHSIPVSQYDVAALLTLPKPYRIKRGN
NNSKNSANSNRTFQKKRSLKRNF
>Mature_423_residues
MQNNYLSQLRFSDLPLHHQVLAALQEKGFDYCTPIQALSLPMSLAGKDVAGQAQTGTGKTMAFLTATFHHLLTQQGDKGG
RQPRALILAPTRELAVQINNDAALLTKATGLKTGLAYGGDGYEKQLKAIEQGVDILIGTTGRVIDYVKQGIVRLDKIQVV
VLDEADRMFDLGFIKDIRYLLRKCPAPQHRLTMLFSATLSYKVRELAFEDMNDPEYVEIEPLQKTGHRIKEELFYPSNQD
KMALLLTLLEEEWPERCIIFANTKHRCEDIWGYLAADGHRVGLLTGDVAQKKRLSLLKQFTEGHLDILVATDVAARGLHI
SDVSHVFNYDLPDDREDYVHRIGRTGRAGESGVSISFACEEYAMNLPAIEEYISHSIPVSQYDVAALLTLPKPYRIKRGN
NNSKNSANSNRTFQKKRSLKRNF

Specific function: Can carry out ATP-dependent unwinding of double stranded RNA. Has a role in RNA decay. Involved in the RNA degradosome, a multi-enzyme complex important in RNA processing and messenger RNA degradation

COG id: COG0513

COG function: function code LKJ; Superfamily II DNA and RNA helicases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 helicase C-terminal domain

Homologues:

Organism=Homo sapiens, GI148613856, Length=342, Percent_Identity=39.1812865497076, Blast_Score=231, Evalue=7e-61,
Organism=Homo sapiens, GI38201710, Length=342, Percent_Identity=39.1812865497076, Blast_Score=231, Evalue=7e-61,
Organism=Homo sapiens, GI41327771, Length=408, Percent_Identity=36.2745098039216, Blast_Score=229, Evalue=4e-60,
Organism=Homo sapiens, GI4758138, Length=353, Percent_Identity=37.6770538243626, Blast_Score=228, Evalue=8e-60,
Organism=Homo sapiens, GI224593278, Length=371, Percent_Identity=36.3881401617251, Blast_Score=224, Evalue=2e-58,
Organism=Homo sapiens, GI301171467, Length=366, Percent_Identity=35.5191256830601, Blast_Score=222, Evalue=6e-58,
Organism=Homo sapiens, GI87196351, Length=366, Percent_Identity=35.5191256830601, Blast_Score=222, Evalue=7e-58,
Organism=Homo sapiens, GI169881239, Length=372, Percent_Identity=35.4838709677419, Blast_Score=221, Evalue=7e-58,
Organism=Homo sapiens, GI13514809, Length=372, Percent_Identity=35.4838709677419, Blast_Score=221, Evalue=7e-58,
Organism=Homo sapiens, GI222352149, Length=367, Percent_Identity=37.6021798365123, Blast_Score=221, Evalue=7e-58,
Organism=Homo sapiens, GI301171475, Length=366, Percent_Identity=35.5191256830601, Blast_Score=221, Evalue=7e-58,
Organism=Homo sapiens, GI45446747, Length=349, Percent_Identity=35.5300859598854, Blast_Score=220, Evalue=2e-57,
Organism=Homo sapiens, GI45446743, Length=349, Percent_Identity=35.5300859598854, Blast_Score=220, Evalue=2e-57,
Organism=Homo sapiens, GI262118318, Length=357, Percent_Identity=35.2941176470588, Blast_Score=212, Evalue=7e-55,
Organism=Homo sapiens, GI21071032, Length=374, Percent_Identity=35.0267379679144, Blast_Score=210, Evalue=2e-54,
Organism=Homo sapiens, GI262231852, Length=357, Percent_Identity=35.2941176470588, Blast_Score=210, Evalue=2e-54,
Organism=Homo sapiens, GI216548263, Length=357, Percent_Identity=35.2941176470588, Blast_Score=210, Evalue=2e-54,
Organism=Homo sapiens, GI13518015, Length=357, Percent_Identity=35.2941176470588, Blast_Score=210, Evalue=2e-54,
Organism=Homo sapiens, GI13129006, Length=360, Percent_Identity=36.9444444444444, Blast_Score=205, Evalue=8e-53,
Organism=Homo sapiens, GI51094101, Length=373, Percent_Identity=33.7801608579088, Blast_Score=204, Evalue=1e-52,
Organism=Homo sapiens, GI164419743, Length=373, Percent_Identity=33.7801608579088, Blast_Score=204, Evalue=1e-52,
Organism=Homo sapiens, GI7661920, Length=379, Percent_Identity=34.3007915567282, Blast_Score=204, Evalue=2e-52,
Organism=Homo sapiens, GI50659095, Length=366, Percent_Identity=37.431693989071, Blast_Score=203, Evalue=2e-52,
Organism=Homo sapiens, GI41327773, Length=352, Percent_Identity=34.375, Blast_Score=199, Evalue=5e-51,
Organism=Homo sapiens, GI55749865, Length=376, Percent_Identity=33.7765957446808, Blast_Score=199, Evalue=6e-51,
Organism=Homo sapiens, GI20149629, Length=382, Percent_Identity=32.4607329842932, Blast_Score=185, Evalue=7e-47,
Organism=Homo sapiens, GI164664518, Length=369, Percent_Identity=29.810298102981, Blast_Score=182, Evalue=6e-46,
Organism=Homo sapiens, GI41327779, Length=395, Percent_Identity=32.9113924050633, Blast_Score=181, Evalue=1e-45,
Organism=Homo sapiens, GI13514831, Length=387, Percent_Identity=31.7829457364341, Blast_Score=179, Evalue=5e-45,
Organism=Homo sapiens, GI8922886, Length=379, Percent_Identity=33.509234828496, Blast_Score=177, Evalue=1e-44,
Organism=Homo sapiens, GI6005743, Length=379, Percent_Identity=33.245382585752, Blast_Score=176, Evalue=3e-44,
Organism=Homo sapiens, GI21040371, Length=355, Percent_Identity=31.5492957746479, Blast_Score=175, Evalue=9e-44,
Organism=Homo sapiens, GI188035877, Length=344, Percent_Identity=31.6860465116279, Blast_Score=174, Evalue=9e-44,
Organism=Homo sapiens, GI31542656, Length=392, Percent_Identity=32.9081632653061, Blast_Score=173, Evalue=3e-43,
Organism=Homo sapiens, GI4758112, Length=355, Percent_Identity=30.4225352112676, Blast_Score=170, Evalue=2e-42,
Organism=Homo sapiens, GI18375623, Length=355, Percent_Identity=30.4225352112676, Blast_Score=170, Evalue=2e-42,
Organism=Homo sapiens, GI62241022, Length=362, Percent_Identity=33.4254143646409, Blast_Score=169, Evalue=5e-42,
Organism=Homo sapiens, GI83700235, Length=382, Percent_Identity=33.5078534031414, Blast_Score=167, Evalue=2e-41,
Organism=Homo sapiens, GI38569503, Length=375, Percent_Identity=29.3333333333333, Blast_Score=166, Evalue=5e-41,
Organism=Homo sapiens, GI4503529, Length=382, Percent_Identity=33.2460732984293, Blast_Score=166, Evalue=5e-41,
Organism=Homo sapiens, GI38569505, Length=375, Percent_Identity=29.3333333333333, Blast_Score=165, Evalue=8e-41,
Organism=Homo sapiens, GI62241024, Length=352, Percent_Identity=33.2386363636364, Blast_Score=161, Evalue=1e-39,
Organism=Homo sapiens, GI17505907, Length=463, Percent_Identity=28.2937365010799, Blast_Score=159, Evalue=5e-39,
Organism=Homo sapiens, GI38327634, Length=381, Percent_Identity=30.7086614173228, Blast_Score=159, Evalue=5e-39,
Organism=Homo sapiens, GI41327776, Length=382, Percent_Identity=30.3664921465969, Blast_Score=158, Evalue=1e-38,
Organism=Homo sapiens, GI164419732, Length=362, Percent_Identity=32.0441988950276, Blast_Score=157, Evalue=2e-38,
Organism=Homo sapiens, GI256223453, Length=370, Percent_Identity=29.4594594594595, Blast_Score=153, Evalue=3e-37,
Organism=Homo sapiens, GI256773275, Length=389, Percent_Identity=31.3624678663239, Blast_Score=143, Evalue=4e-34,
Organism=Homo sapiens, GI9506931, Length=401, Percent_Identity=27.6807980049875, Blast_Score=142, Evalue=5e-34,
Organism=Homo sapiens, GI9966805, Length=313, Percent_Identity=30.9904153354633, Blast_Score=130, Evalue=2e-30,
Organism=Homo sapiens, GI4826686, Length=336, Percent_Identity=31.8452380952381, Blast_Score=130, Evalue=3e-30,
Organism=Homo sapiens, GI154759257, Length=420, Percent_Identity=27.3809523809524, Blast_Score=117, Evalue=1e-26,
Organism=Homo sapiens, GI20336298, Length=224, Percent_Identity=32.5892857142857, Blast_Score=114, Evalue=1e-25,
Organism=Escherichia coli, GI1790214, Length=417, Percent_Identity=72.1822541966427, Blast_Score=615, Evalue=1e-177,
Organism=Escherichia coli, GI1787016, Length=371, Percent_Identity=39.0835579514825, Blast_Score=269, Evalue=3e-73,
Organism=Escherichia coli, GI87082221, Length=379, Percent_Identity=39.3139841688654, Blast_Score=250, Evalue=1e-67,
Organism=Escherichia coli, GI1788930, Length=363, Percent_Identity=39.1184573002755, Blast_Score=232, Evalue=4e-62,
Organism=Escherichia coli, GI1787605, Length=354, Percent_Identity=38.9830508474576, Blast_Score=223, Evalue=2e-59,
Organism=Caenorhabditis elegans, GI71995718, Length=364, Percent_Identity=37.9120879120879, Blast_Score=234, Evalue=6e-62,
Organism=Caenorhabditis elegans, GI17510307, Length=361, Percent_Identity=37.3961218836565, Blast_Score=226, Evalue=1e-59,
Organism=Caenorhabditis elegans, GI17510309, Length=361, Percent_Identity=37.3961218836565, Blast_Score=226, Evalue=1e-59,
Organism=Caenorhabditis elegans, GI71995514, Length=361, Percent_Identity=37.3961218836565, Blast_Score=226, Evalue=2e-59,
Organism=Caenorhabditis elegans, GI115533224, Length=384, Percent_Identity=34.375, Blast_Score=222, Evalue=2e-58,
Organism=Caenorhabditis elegans, GI17552642, Length=410, Percent_Identity=34.390243902439, Blast_Score=215, Evalue=3e-56,
Organism=Caenorhabditis elegans, GI86570094, Length=344, Percent_Identity=38.3720930232558, Blast_Score=211, Evalue=8e-55,
Organism=Caenorhabditis elegans, GI17510559, Length=379, Percent_Identity=32.7176781002639, Blast_Score=209, Evalue=1e-54,
Organism=Caenorhabditis elegans, GI32565321, Length=368, Percent_Identity=35.5978260869565, Blast_Score=209, Evalue=3e-54,
Organism=Caenorhabditis elegans, GI17507881, Length=369, Percent_Identity=35.230352303523, Blast_Score=203, Evalue=1e-52,
Organism=Caenorhabditis elegans, GI71995724, Length=379, Percent_Identity=32.9815303430079, Blast_Score=202, Evalue=2e-52,
Organism=Caenorhabditis elegans, GI17507121, Length=379, Percent_Identity=32.9815303430079, Blast_Score=202, Evalue=3e-52,
Organism=Caenorhabditis elegans, GI17507945, Length=369, Percent_Identity=33.8753387533875, Blast_Score=201, Evalue=5e-52,
Organism=Caenorhabditis elegans, GI17507877, Length=377, Percent_Identity=34.7480106100796, Blast_Score=201, Evalue=6e-52,
Organism=Caenorhabditis elegans, GI71987143, Length=381, Percent_Identity=33.0708661417323, Blast_Score=200, Evalue=1e-51,
Organism=Caenorhabditis elegans, GI17555296, Length=354, Percent_Identity=35.5932203389831, Blast_Score=198, Evalue=4e-51,
Organism=Caenorhabditis elegans, GI17507879, Length=374, Percent_Identity=34.4919786096257, Blast_Score=196, Evalue=2e-50,
Organism=Caenorhabditis elegans, GI71999646, Length=349, Percent_Identity=34.0974212034384, Blast_Score=191, Evalue=5e-49,
Organism=Caenorhabditis elegans, GI71999644, Length=349, Percent_Identity=34.0974212034384, Blast_Score=191, Evalue=7e-49,
Organism=Caenorhabditis elegans, GI17537549, Length=350, Percent_Identity=35.1428571428571, Blast_Score=190, Evalue=1e-48,
Organism=Caenorhabditis elegans, GI17509811, Length=390, Percent_Identity=32.3076923076923, Blast_Score=184, Evalue=6e-47,
Organism=Caenorhabditis elegans, GI71982858, Length=372, Percent_Identity=31.4516129032258, Blast_Score=181, Evalue=5e-46,
Organism=Caenorhabditis elegans, GI115532546, Length=383, Percent_Identity=31.5926892950392, Blast_Score=170, Evalue=1e-42,
Organism=Caenorhabditis elegans, GI115532548, Length=383, Percent_Identity=31.5926892950392, Blast_Score=169, Evalue=3e-42,
Organism=Caenorhabditis elegans, GI17552114, Length=370, Percent_Identity=29.1891891891892, Blast_Score=168, Evalue=5e-42,
Organism=Caenorhabditis elegans, GI71990816, Length=355, Percent_Identity=34.3661971830986, Blast_Score=163, Evalue=1e-40,
Organism=Caenorhabditis elegans, GI193208216, Length=378, Percent_Identity=32.8042328042328, Blast_Score=157, Evalue=7e-39,
Organism=Caenorhabditis elegans, GI17505370, Length=366, Percent_Identity=31.6939890710383, Blast_Score=155, Evalue=3e-38,
Organism=Caenorhabditis elegans, GI17507641, Length=380, Percent_Identity=30.7894736842105, Blast_Score=152, Evalue=3e-37,
Organism=Caenorhabditis elegans, GI193206561, Length=359, Percent_Identity=29.5264623955432, Blast_Score=152, Evalue=3e-37,
Organism=Caenorhabditis elegans, GI17508543, Length=382, Percent_Identity=28.7958115183246, Blast_Score=151, Evalue=5e-37,
Organism=Caenorhabditis elegans, GI32564046, Length=367, Percent_Identity=30.2452316076294, Blast_Score=143, Evalue=1e-34,
Organism=Caenorhabditis elegans, GI17536099, Length=380, Percent_Identity=31.8421052631579, Blast_Score=142, Evalue=4e-34,
Organism=Caenorhabditis elegans, GI17536101, Length=380, Percent_Identity=31.8421052631579, Blast_Score=141, Evalue=7e-34,
Organism=Caenorhabditis elegans, GI17536103, Length=381, Percent_Identity=32.2834645669291, Blast_Score=138, Evalue=5e-33,
Organism=Caenorhabditis elegans, GI25148203, Length=411, Percent_Identity=24.5742092457421, Blast_Score=129, Evalue=4e-30,
Organism=Caenorhabditis elegans, GI17556951, Length=354, Percent_Identity=28.8135593220339, Blast_Score=122, Evalue=3e-28,
Organism=Caenorhabditis elegans, GI17553716, Length=368, Percent_Identity=27.445652173913, Blast_Score=119, Evalue=3e-27,
Organism=Caenorhabditis elegans, GI71997889, Length=416, Percent_Identity=26.4423076923077, Blast_Score=114, Evalue=1e-25,
Organism=Caenorhabditis elegans, GI25148291, Length=331, Percent_Identity=26.8882175226586, Blast_Score=108, Evalue=7e-24,
Organism=Caenorhabditis elegans, GI71982862, Length=219, Percent_Identity=30.1369863013699, Blast_Score=104, Evalue=1e-22,
Organism=Caenorhabditis elegans, GI71987152, Length=108, Percent_Identity=42.5925925925926, Blast_Score=96, Evalue=5e-20,
Organism=Caenorhabditis elegans, GI17557982, Length=408, Percent_Identity=23.0392156862745, Blast_Score=83, Evalue=2e-16,
Organism=Saccharomyces cerevisiae, GI6325138, Length=361, Percent_Identity=38.2271468144044, Blast_Score=245, Evalue=1e-65,
Organism=Saccharomyces cerevisiae, GI6324217, Length=355, Percent_Identity=38.0281690140845, Blast_Score=244, Evalue=2e-65,
Organism=Saccharomyces cerevisiae, GI6324778, Length=421, Percent_Identity=35.1543942992874, Blast_Score=243, Evalue=5e-65,
Organism=Saccharomyces cerevisiae, GI6321360, Length=360, Percent_Identity=37.5, Blast_Score=220, Evalue=3e-58,
Organism=Saccharomyces cerevisiae, GI6323021, Length=360, Percent_Identity=34.4444444444444, Blast_Score=210, Evalue=4e-55,
Organism=Saccharomyces cerevisiae, GI6321856, Length=382, Percent_Identity=35.6020942408377, Blast_Score=202, Evalue=1e-52,
Organism=Saccharomyces cerevisiae, GI6320224, Length=383, Percent_Identity=33.6814621409922, Blast_Score=191, Evalue=2e-49,
Organism=Saccharomyces cerevisiae, GI6320041, Length=396, Percent_Identity=30.3030303030303, Blast_Score=181, Evalue=2e-46,
Organism=Saccharomyces cerevisiae, GI6322912, Length=392, Percent_Identity=33.1632653061224, Blast_Score=181, Evalue=2e-46,
Organism=Saccharomyces cerevisiae, GI6322323, Length=392, Percent_Identity=33.1632653061224, Blast_Score=181, Evalue=2e-46,
Organism=Saccharomyces cerevisiae, GI6320173, Length=422, Percent_Identity=30.8056872037915, Blast_Score=179, Evalue=6e-46,
Organism=Saccharomyces cerevisiae, GI6323947, Length=384, Percent_Identity=31.25, Blast_Score=177, Evalue=2e-45,
Organism=Saccharomyces cerevisiae, GI6324620, Length=392, Percent_Identity=33.1632653061224, Blast_Score=174, Evalue=3e-44,
Organism=Saccharomyces cerevisiae, GI6320449, Length=367, Percent_Identity=33.2425068119891, Blast_Score=173, Evalue=4e-44,
Organism=Saccharomyces cerevisiae, GI6322427, Length=359, Percent_Identity=32.8690807799443, Blast_Score=168, Evalue=1e-42,
Organism=Saccharomyces cerevisiae, GI6319714, Length=376, Percent_Identity=30.8510638297872, Blast_Score=161, Evalue=1e-40,
Organism=Saccharomyces cerevisiae, GI6321111, Length=376, Percent_Identity=30.5851063829787, Blast_Score=157, Evalue=3e-39,
Organism=Saccharomyces cerevisiae, GI6321267, Length=401, Percent_Identity=32.9177057356608, Blast_Score=156, Evalue=6e-39,
Organism=Saccharomyces cerevisiae, GI6320119, Length=354, Percent_Identity=29.3785310734463, Blast_Score=155, Evalue=1e-38,
Organism=Saccharomyces cerevisiae, GI6320400, Length=385, Percent_Identity=30.3896103896104, Blast_Score=150, Evalue=3e-37,
Organism=Saccharomyces cerevisiae, GI6321963, Length=390, Percent_Identity=30, Blast_Score=147, Evalue=4e-36,
Organism=Saccharomyces cerevisiae, GI6319618, Length=418, Percent_Identity=29.6650717703349, Blast_Score=143, Evalue=4e-35,
Organism=Saccharomyces cerevisiae, GI6323306, Length=425, Percent_Identity=24.4705882352941, Blast_Score=122, Evalue=1e-28,
Organism=Saccharomyces cerevisiae, GI6322876, Length=475, Percent_Identity=27.7894736842105, Blast_Score=117, Evalue=4e-27,
Organism=Saccharomyces cerevisiae, GI6324366, Length=344, Percent_Identity=24.7093023255814, Blast_Score=101, Evalue=2e-22,
Organism=Drosophila melanogaster, GI21356161, Length=358, Percent_Identity=38.268156424581, Blast_Score=232, Evalue=3e-61,
Organism=Drosophila melanogaster, GI28574962, Length=342, Percent_Identity=38.8888888888889, Blast_Score=232, Evalue=4e-61,
Organism=Drosophila melanogaster, GI18857967, Length=434, Percent_Identity=35.2534562211982, Blast_Score=230, Evalue=2e-60,
Organism=Drosophila melanogaster, GI24644479, Length=365, Percent_Identity=35.3424657534247, Blast_Score=229, Evalue=3e-60,
Organism=Drosophila melanogaster, GI24644483, Length=365, Percent_Identity=35.3424657534247, Blast_Score=229, Evalue=4e-60,
Organism=Drosophila melanogaster, GI24644487, Length=365, Percent_Identity=35.3424657534247, Blast_Score=229, Evalue=4e-60,
Organism=Drosophila melanogaster, GI45551833, Length=365, Percent_Identity=35.3424657534247, Blast_Score=229, Evalue=4e-60,
Organism=Drosophila melanogaster, GI24644485, Length=365, Percent_Identity=35.3424657534247, Blast_Score=229, Evalue=4e-60,
Organism=Drosophila melanogaster, GI281361218, Length=365, Percent_Identity=35.3424657534247, Blast_Score=228, Evalue=4e-60,
Organism=Drosophila melanogaster, GI24644481, Length=365, Percent_Identity=35.3424657534247, Blast_Score=228, Evalue=4e-60,
Organism=Drosophila melanogaster, GI24662330, Length=411, Percent_Identity=34.7931873479319, Blast_Score=228, Evalue=8e-60,
Organism=Drosophila melanogaster, GI24584399, Length=373, Percent_Identity=34.3163538873995, Blast_Score=225, Evalue=5e-59,
Organism=Drosophila melanogaster, GI17985987, Length=370, Percent_Identity=35.9459459459459, Blast_Score=224, Evalue=6e-59,
Organism=Drosophila melanogaster, GI21355075, Length=365, Percent_Identity=37.8082191780822, Blast_Score=214, Evalue=1e-55,
Organism=Drosophila melanogaster, GI24645031, Length=379, Percent_Identity=34.3007915567282, Blast_Score=206, Evalue=3e-53,
Organism=Drosophila melanogaster, GI24584994, Length=392, Percent_Identity=33.6734693877551, Blast_Score=204, Evalue=8e-53,
Organism=Drosophila melanogaster, GI24642151, Length=347, Percent_Identity=34.5821325648415, Blast_Score=202, Evalue=4e-52,
Organism=Drosophila melanogaster, GI17977678, Length=356, Percent_Identity=34.5505617977528, Blast_Score=199, Evalue=2e-51,
Organism=Drosophila melanogaster, GI28575014, Length=384, Percent_Identity=32.03125, Blast_Score=199, Evalue=4e-51,
Organism=Drosophila melanogaster, GI24585582, Length=355, Percent_Identity=34.3661971830986, Blast_Score=187, Evalue=1e-47,
Organism=Drosophila melanogaster, GI24582080, Length=381, Percent_Identity=33.5958005249344, Blast_Score=185, Evalue=4e-47,
Organism=Drosophila melanogaster, GI24582078, Length=381, Percent_Identity=33.5958005249344, Blast_Score=185, Evalue=4e-47,
Organism=Drosophila melanogaster, GI17136248, Length=381, Percent_Identity=33.5958005249344, Blast_Score=185, Evalue=4e-47,
Organism=Drosophila melanogaster, GI24582075, Length=381, Percent_Identity=33.5958005249344, Blast_Score=185, Evalue=4e-47,
Organism=Drosophila melanogaster, GI281365720, Length=303, Percent_Identity=37.2937293729373, Blast_Score=184, Evalue=7e-47,
Organism=Drosophila melanogaster, GI24666101, Length=377, Percent_Identity=32.3607427055703, Blast_Score=175, Evalue=7e-44,
Organism=Drosophila melanogaster, GI24583281, Length=410, Percent_Identity=29.5121951219512, Blast_Score=174, Evalue=1e-43,
Organism=Drosophila melanogaster, GI24583279, Length=410, Percent_Identity=29.5121951219512, Blast_Score=173, Evalue=2e-43,
Organism=Drosophila melanogaster, GI19920478, Length=354, Percent_Identity=32.2033898305085, Blast_Score=167, Evalue=1e-41,
Organism=Drosophila melanogaster, GI24581954, Length=356, Percent_Identity=30.6179775280899, Blast_Score=166, Evalue=2e-41,
Organism=Drosophila melanogaster, GI24581952, Length=356, Percent_Identity=30.6179775280899, Blast_Score=166, Evalue=2e-41,
Organism=Drosophila melanogaster, GI24581956, Length=356, Percent_Identity=30.6179775280899, Blast_Score=166, Evalue=2e-41,
Organism=Drosophila melanogaster, GI20130173, Length=428, Percent_Identity=30.607476635514, Blast_Score=160, Evalue=1e-39,
Organism=Drosophila melanogaster, GI17647335, Length=358, Percent_Identity=31.0055865921788, Blast_Score=160, Evalue=1e-39,
Organism=Drosophila melanogaster, GI28571808, Length=346, Percent_Identity=32.6589595375723, Blast_Score=160, Evalue=1e-39,
Organism=Drosophila melanogaster, GI28571809, Length=346, Percent_Identity=32.6589595375723, Blast_Score=160, Evalue=1e-39,
Organism=Drosophila melanogaster, GI24642822, Length=404, Percent_Identity=29.7029702970297, Blast_Score=160, Evalue=1e-39,
Organism=Drosophila melanogaster, GI17136814, Length=388, Percent_Identity=31.4432989690722, Blast_Score=157, Evalue=1e-38,
Organism=Drosophila melanogaster, GI24643725, Length=380, Percent_Identity=28.4210526315789, Blast_Score=155, Evalue=6e-38,
Organism=Drosophila melanogaster, GI21355559, Length=406, Percent_Identity=29.3103448275862, Blast_Score=149, Evalue=4e-36,
Organism=Drosophila melanogaster, GI24668515, Length=326, Percent_Identity=30.3680981595092, Blast_Score=126, Evalue=3e-29,
Organism=Drosophila melanogaster, GI24640164, Length=349, Percent_Identity=25.214899713467, Blast_Score=118, Evalue=7e-27,
Organism=Drosophila melanogaster, GI17136666, Length=422, Percent_Identity=26.7772511848341, Blast_Score=103, Evalue=2e-22,
Organism=Drosophila melanogaster, GI28571338, Length=232, Percent_Identity=31.8965517241379, Blast_Score=102, Evalue=4e-22,
Organism=Drosophila melanogaster, GI18859659, Length=232, Percent_Identity=31.8965517241379, Blast_Score=102, Evalue=4e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RHLB_PASMU (Q9CJS1)

Other databases:

- EMBL:   AE004439
- RefSeq:   NP_246860.1
- ProteinModelPortal:   Q9CJS1
- SMR:   Q9CJS1
- GeneID:   1245268
- GenomeReviews:   AE004439_GR
- KEGG:   pmu:PM1921
- NMPDR:   fig|272843.1.peg.1922
- HOGENOM:   HBG737336
- OMA:   SRLNMLF
- ProtClustDB:   PRK04837
- BioCyc:   PMUL272843:PM1921-MONOMER
- HAMAP:   MF_00661
- InterPro:   IPR014001
- InterPro:   IPR011545
- InterPro:   IPR001650
- InterPro:   IPR014021
- InterPro:   IPR000629
- InterPro:   IPR014014
- SMART:   SM00487
- SMART:   SM00490

Pfam domain/function: PF00270 DEAD; PF00271 Helicase_C

EC number: =3.6.4.13

Molecular weight: Translated: 47504; Mature: 47504

Theoretical pI: Translated: 7.95; Mature: 7.95

Prosite motif: PS00039 DEAD_ATP_HELICASE; PS51192 HELICASE_ATP_BIND_1; PS51194 HELICASE_CTER; PS51195 Q_MOTIF

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQNNYLSQLRFSDLPLHHQVLAALQEKGFDYCTPIQALSLPMSLAGKDVAGQAQTGTGKT
CCCCHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCHHHHHCCHHHCCCCCCCCCCCCCCCH
MAFLTATFHHLLTQQGDKGGRQPRALILAPTRELAVQINNDAALLTKATGLKTGLAYGGD
HHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCEEEEEECCCCEEEEECCCCCCCCCCCCC
GYEKQLKAIEQGVDILIGTTGRVIDYVKQGIVRLDKIQVVVLDEADRMFDLGFIKDIRYL
CHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHEECEEEEEEECCCCCHHHHHHHHHHHHH
LRKCPAPQHRLTMLFSATLSYKVRELAFEDMNDPEYVEIEPLQKTGHRIKEELFYPSNQD
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECHHHHHHHHHHHHCCCCCCC
KMALLLTLLEEEWPERCIIFANTKHRCEDIWGYLAADGHRVGLLTGDVAQKKRLSLLKQF
HHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHCCCEEEEEEECCHHHHHHHHHHHHH
TEGHLDILVATDVAARGLHISDVSHVFNYDLPDDREDYVHRIGRTGRAGESGVSISFACE
CCCCEEEEEEECHHHCCCCHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCCEEEEEHH
EYAMNLPAIEEYISHSIPVSQYDVAALLTLPKPYRIKRGNNNSKNSANSNRTFQKKRSLK
HHHCCCHHHHHHHHCCCCCCHHHHEEEEECCCCEEEECCCCCCCCCCCCCHHHHHHHHHH
RNF
CCC
>Mature Secondary Structure
MQNNYLSQLRFSDLPLHHQVLAALQEKGFDYCTPIQALSLPMSLAGKDVAGQAQTGTGKT
CCCCHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCHHHHHCCHHHCCCCCCCCCCCCCCCH
MAFLTATFHHLLTQQGDKGGRQPRALILAPTRELAVQINNDAALLTKATGLKTGLAYGGD
HHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCEEEEEECCCCEEEEECCCCCCCCCCCCC
GYEKQLKAIEQGVDILIGTTGRVIDYVKQGIVRLDKIQVVVLDEADRMFDLGFIKDIRYL
CHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHEECEEEEEEECCCCCHHHHHHHHHHHHH
LRKCPAPQHRLTMLFSATLSYKVRELAFEDMNDPEYVEIEPLQKTGHRIKEELFYPSNQD
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECHHHHHHHHHHHHCCCCCCC
KMALLLTLLEEEWPERCIIFANTKHRCEDIWGYLAADGHRVGLLTGDVAQKKRLSLLKQF
HHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHCCCEEEEEEECCHHHHHHHHHHHHH
TEGHLDILVATDVAARGLHISDVSHVFNYDLPDDREDYVHRIGRTGRAGESGVSISFACE
CCCCEEEEEEECHHHCCCCHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCCEEEEEHH
EYAMNLPAIEEYISHSIPVSQYDVAALLTLPKPYRIKRGNNNSKNSANSNRTFQKKRSLK
HHHCCCHHHHHHHHCCCCCCHHHHEEEEECCCCEEEECCCCCCCCCCCCCHHHHHHHHHH
RNF
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11248100