| Definition | Pasteurella multocida subsp. multocida str. Pm70, complete genome. |
|---|---|
| Accession | NC_002663 |
| Length | 2,257,487 |
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The map label for this gene is cpxR [H]
Identifier: 15603752
GI number: 15603752
Start: 2128482
End: 2129183
Strand: Direct
Name: cpxR [H]
Synonym: PM1887
Alternate gene names: 15603752
Gene position: 2128482-2129183 (Clockwise)
Preceding gene: 15603751
Following gene: 15603753
Centisome position: 94.29
GC content: 36.75
Gene sequence:
>702_bases ATGCCTAAGATTTTATTAGTTGATGATGATGTTGAATTAATAGAGCTTCTTGCTGAGTTATTAACATTGGAAGGCTTTGA GATTGATATGGCAAATAATGGCTTACAAGCATTACAAAAATTAGATCTAAGTTATGATTTAGTTTTGTTGGATATTATGA TGCCTGTCCTCAATGGGGTTGAGACGTTAAAGAAAATTCGTCAGGAATTTTCTGTACCCGTGATCATGTTAACTGCACGT GGTGATGATATTGATCGTATTCTCGGTCTCGAACTTGGGGCAGATGATTACATTCCAAAACCGTTTAATGATCGCGAGCT TGTAGCGCGTATTAAAGCGATTTTACGTCGTACACAGCCAGCAGCCACATTAAATACAGAAGTGAAAGAAAATCGTAGCG AATTTGTATTTTGCGATATTACACTTTATCCCGGTCGACAACAGGCATTTCACCATGATAAAGATTTAGAATTAACAGGA ACAGAATTTGCACTATTACAAAAATTGGTCTTGAATCCCGGTCAAATTCTTTCCAGAGAGTCGTTAAGTATTGAAATTTT AGGTAAACAATTAACCCCATTTGACCGTGCTATTGATATGCATATGTCAAATTTACGTAAGAAACTTCCACCGCGTACGG ATGGGTCTCCTTGGTTTAAAACCTTACGTGGACGAGGTTATTTGTTAGTGTCAGAAAAATAA
Upstream 100 bases:
>100_bases AGCGCCTCAAAAAGCTGGTGGAAATTTTGGCAATAGCAAATAATTTGTCGCGCTGTTGTTTATTGCGTTTTCTTTTTAAT CAAATGTGAGGAGAGTCTGT
Downstream 100 bases:
>100_bases CAGTGATGATAAAGGCTATTATCATGCATAATAGCCTTGTGTTTGAGGGCAACTATGCCATTTGCGAAAGAAAGTTTTTT TAATACTATTTCATTCCGAA
Product: CpxR
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 233; Mature: 232
Protein sequence:
>233_residues MPKILLVDDDVELIELLAELLTLEGFEIDMANNGLQALQKLDLSYDLVLLDIMMPVLNGVETLKKIRQEFSVPVIMLTAR GDDIDRILGLELGADDYIPKPFNDRELVARIKAILRRTQPAATLNTEVKENRSEFVFCDITLYPGRQQAFHHDKDLELTG TEFALLQKLVLNPGQILSRESLSIEILGKQLTPFDRAIDMHMSNLRKKLPPRTDGSPWFKTLRGRGYLLVSEK
Sequences:
>Translated_233_residues MPKILLVDDDVELIELLAELLTLEGFEIDMANNGLQALQKLDLSYDLVLLDIMMPVLNGVETLKKIRQEFSVPVIMLTAR GDDIDRILGLELGADDYIPKPFNDRELVARIKAILRRTQPAATLNTEVKENRSEFVFCDITLYPGRQQAFHHDKDLELTG TEFALLQKLVLNPGQILSRESLSIEILGKQLTPFDRAIDMHMSNLRKKLPPRTDGSPWFKTLRGRGYLLVSEK >Mature_232_residues PKILLVDDDVELIELLAELLTLEGFEIDMANNGLQALQKLDLSYDLVLLDIMMPVLNGVETLKKIRQEFSVPVIMLTARG DDIDRILGLELGADDYIPKPFNDRELVARIKAILRRTQPAATLNTEVKENRSEFVFCDITLYPGRQQAFHHDKDLELTGT EFALLQKLVLNPGQILSRESLSIEILGKQLTPFDRAIDMHMSNLRKKLPPRTDGSPWFKTLRGRGYLLVSEK
Specific function: Member of the two-component regulatory system CpxA/CpxR. This system combats a variety of extracytoplasmic protein-mediated toxicities. It performs this function by increasing the synthesis of the periplasmic protease, DegP as well as that of CpxP protein
COG id: COG0745
COG function: function code TK; Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
Gene ontology:
Cell location: Cytoplasmic [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
Organism=Escherichia coli, GI2367329, Length=232, Percent_Identity=63.3620689655172, Blast_Score=264, Evalue=4e-72, Organism=Escherichia coli, GI1789809, Length=230, Percent_Identity=39.5652173913043, Blast_Score=158, Evalue=3e-40, Organism=Escherichia coli, GI1788394, Length=227, Percent_Identity=37.8854625550661, Blast_Score=145, Evalue=3e-36, Organism=Escherichia coli, GI1786599, Length=229, Percent_Identity=37.9912663755458, Blast_Score=142, Evalue=2e-35, Organism=Escherichia coli, GI1790552, Length=233, Percent_Identity=37.3390557939914, Blast_Score=136, Evalue=1e-33, Organism=Escherichia coli, GI1790863, Length=233, Percent_Identity=32.618025751073, Blast_Score=126, Evalue=1e-30, Organism=Escherichia coli, GI1790860, Length=229, Percent_Identity=34.9344978165939, Blast_Score=125, Evalue=3e-30, Organism=Escherichia coli, GI1789402, Length=229, Percent_Identity=34.061135371179, Blast_Score=117, Evalue=8e-28, Organism=Escherichia coli, GI1786784, Length=230, Percent_Identity=34.3478260869565, Blast_Score=116, Evalue=1e-27, Organism=Escherichia coli, GI1787229, Length=237, Percent_Identity=34.1772151898734, Blast_Score=115, Evalue=2e-27, Organism=Escherichia coli, GI1786911, Length=230, Percent_Identity=31.7391304347826, Blast_Score=106, Evalue=2e-24, Organism=Escherichia coli, GI87082012, Length=236, Percent_Identity=32.6271186440678, Blast_Score=105, Evalue=3e-24, Organism=Escherichia coli, GI145693140, Length=235, Percent_Identity=31.063829787234, Blast_Score=100, Evalue=2e-22, Organism=Escherichia coli, GI1787375, Length=234, Percent_Identity=28.2051282051282, Blast_Score=90, Evalue=1e-19, Organism=Escherichia coli, GI1788550, Length=107, Percent_Identity=41.1214953271028, Blast_Score=77, Evalue=7e-16, Organism=Escherichia coli, GI1790437, Length=118, Percent_Identity=35.5932203389831, Blast_Score=69, Evalue=2e-13, Organism=Escherichia coli, GI1790299, Length=118, Percent_Identity=33.8983050847458, Blast_Score=64, Evalue=9e-12, Organism=Saccharomyces cerevisiae, GI6322000, Length=101, Percent_Identity=35.6435643564356, Blast_Score=63, Evalue=5e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011006 - InterPro: IPR001867 - InterPro: IPR001789 - InterPro: IPR011991 [H]
Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]
EC number: NA
Molecular weight: Translated: 26483; Mature: 26352
Theoretical pI: Translated: 4.90; Mature: 4.90
Prosite motif: PS50110 RESPONSE_REGULATORY
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPKILLVDDDVELIELLAELLTLEGFEIDMANNGLQALQKLDLSYDLVLLDIMMPVLNGV CCEEEEECCCHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHCCCHHHHHHHHHHHHHHHH ETLKKIRQEFSVPVIMLTARGDDIDRILGLELGADDYIPKPFNDRELVARIKAILRRTQP HHHHHHHHHHCCCEEEEEECCCCHHHHHHCEECCCCCCCCCCCHHHHHHHHHHHHHHCCC AATLNTEVKENRSEFVFCDITLYPGRQQAFHHDKDLELTGTEFALLQKLVLNPGQILSRE CHHHCCHHHCCCCCEEEEEEEECCCCHHHCCCCCCCEECCHHHHHHHHHHCCCCHHHCCC SLSIEILGKQLTPFDRAIDMHMSNLRKKLPPRTDGSPWFKTLRGRGYLLVSEK CCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCEEEEEECC >Mature Secondary Structure PKILLVDDDVELIELLAELLTLEGFEIDMANNGLQALQKLDLSYDLVLLDIMMPVLNGV CEEEEECCCHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHCCCHHHHHHHHHHHHHHHH ETLKKIRQEFSVPVIMLTARGDDIDRILGLELGADDYIPKPFNDRELVARIKAILRRTQP HHHHHHHHHHCCCEEEEEECCCCHHHHHHCEECCCCCCCCCCCHHHHHHHHHHHHHHCCC AATLNTEVKENRSEFVFCDITLYPGRQQAFHHDKDLELTGTEFALLQKLVLNPGQILSRE CHHHCCHHHCCCCCEEEEEEEECCCCHHHCCCCCCCEECCHHHHHHHHHHCCCCHHHCCC SLSIEILGKQLTPFDRAIDMHMSNLRKKLPPRTDGSPWFKTLRGRGYLLVSEK CCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]