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The map label for this gene is ykgF [H]

Identifier: 15603719

GI number: 15603719

Start: 2095668

End: 2097071

Strand: Direct

Name: ykgF [H]

Synonym: PM1854

Alternate gene names: 15603719

Gene position: 2095668-2097071 (Clockwise)

Preceding gene: 15603718

Following gene: 15603720

Centisome position: 92.83

GC content: 42.95

Gene sequence:

>1404_bases
ATGTCTATTAAAACGAGCCACCTTAAATTTAAACCACGCATCAATGAAGAAATTCAAAATGACATTATGCGTAAAGCTGT
GGTGATGGCACAAGAGCGTATCGGTGCAAACCGCCAGAAAATGGTCGAGGAATTAGGGCATTGGGAAGAATGGCGAGAGC
ATGCCAAAGAGATTCGTAACCATGTCATTGAAAATTTAGACGCTTATTTGTATCAGCTTTCAGAGAAAGTGATCCAAAAT
GGTGGTCATGTGTATTTTGCGGCAACAGCAGAAGATGCCACAAATTACATCAAAAACGTGGCAAAACAGAAAAATGCCAA
GAAAATTGTCAAATCGAAATCCATGGTGACGGAAGAAATTGGCATGAATCATGTGTTAGAAGCTGAGGGGATCAAAGTCG
TTGAAACTGACTTAGGTGAATATATTTTACAAGTGGCAGAAGATAAGCCTTCACATATTGTGGTACCTGCCATTCATAAA
GACCGTCATCAAATCCGTAAAGTACTGGCTGAAAAATTAGGTTATACCGGTTCCGATACACCAGAAGAAATGACCCTATT
TATTCGTGAAACGATCCGTAATGATTTCTTAGAAGCGGATATCGGCGTAAGCGGTTGTAACTTTGCGGTGGCAGAAACGG
GCAGCGTATGTTTAGTCACTAATGAAGGGAACTTACGTTTAGCCACATCCTTGCCAAAAACACATATTGCAGTGATGGGT
ATGGAGCGTTTAGCGCCAACCTTTAAAGAAGTGGATGTGCTAATTACCTTGCTTGCACGCAGTGCGGTAGGGGCACGTTT
AACGGGCTATAACACTTGGTTAACTGGACCACGTCTAGCTGGGGAAACTGATGGACCTGAAGAGTTCCACTTAGTGATCG
TCGATAACGGTCGTTCAAAAATGCTCGGTTCAGAGTTTCGTGAGGTTTTACGTTGTATTCGTTGTGGCGCTTGTTTAAAT
ACTTGTCCAGCCTATCGTCAAATTGGTGGTCATGGTTATGGTTCGATTTATCCGGGTCCAATCGGTTCAGTGATTTCACC
TATTTTAGGGGGGTATGAGGAGTTTAAAGACTTACCTTCAGCATGTTCCTTATGTACGGCGTGTAACCAAGTTTGTCCTG
TGAAAATTCCACTCGCCAATTTGTTATTAAAACACCGCCGTCATATTGCTGAATCAGGTATGAATCCATTAGCAGAACGG
CTTTCTGTCAAAGCGTTCACGTTAGCAAATAGTCACCCAAGTCTGTGGAAAATTGGTATGAATGTAGGGGCGAAAGTGGC
GAAATTGGCGATTCGTGATGGCAAAATGCCGATCCAAGTCGGTGCGATTGCTGAATGGACAAAAGCCCGTGATTTACCAG
ACGCTGAAGGCGAAAGCTTCCGTTCTTGGTTTAAAAACCGTTAA

Upstream 100 bases:

>100_bases
GTTGTTTACTTAATATTGGCGGACGTCTCAAACGTGAGGGGCATCATGTCAAAGTGATGCATATTGCTGAAGTGTTAATG
AGTCGCTAAGGGGGAGAATG

Downstream 100 bases:

>100_bases
TTAAGTGAGGAATTTCGATGTTAGATCAAAATAATAGACAACAGTTTTTAGATCACCTTGCCAAACAATTAGGACGTGAG
CCTCGTACGCAAGTCGTCAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 467; Mature: 466

Protein sequence:

>467_residues
MSIKTSHLKFKPRINEEIQNDIMRKAVVMAQERIGANRQKMVEELGHWEEWREHAKEIRNHVIENLDAYLYQLSEKVIQN
GGHVYFAATAEDATNYIKNVAKQKNAKKIVKSKSMVTEEIGMNHVLEAEGIKVVETDLGEYILQVAEDKPSHIVVPAIHK
DRHQIRKVLAEKLGYTGSDTPEEMTLFIRETIRNDFLEADIGVSGCNFAVAETGSVCLVTNEGNLRLATSLPKTHIAVMG
MERLAPTFKEVDVLITLLARSAVGARLTGYNTWLTGPRLAGETDGPEEFHLVIVDNGRSKMLGSEFREVLRCIRCGACLN
TCPAYRQIGGHGYGSIYPGPIGSVISPILGGYEEFKDLPSACSLCTACNQVCPVKIPLANLLLKHRRHIAESGMNPLAER
LSVKAFTLANSHPSLWKIGMNVGAKVAKLAIRDGKMPIQVGAIAEWTKARDLPDAEGESFRSWFKNR

Sequences:

>Translated_467_residues
MSIKTSHLKFKPRINEEIQNDIMRKAVVMAQERIGANRQKMVEELGHWEEWREHAKEIRNHVIENLDAYLYQLSEKVIQN
GGHVYFAATAEDATNYIKNVAKQKNAKKIVKSKSMVTEEIGMNHVLEAEGIKVVETDLGEYILQVAEDKPSHIVVPAIHK
DRHQIRKVLAEKLGYTGSDTPEEMTLFIRETIRNDFLEADIGVSGCNFAVAETGSVCLVTNEGNLRLATSLPKTHIAVMG
MERLAPTFKEVDVLITLLARSAVGARLTGYNTWLTGPRLAGETDGPEEFHLVIVDNGRSKMLGSEFREVLRCIRCGACLN
TCPAYRQIGGHGYGSIYPGPIGSVISPILGGYEEFKDLPSACSLCTACNQVCPVKIPLANLLLKHRRHIAESGMNPLAER
LSVKAFTLANSHPSLWKIGMNVGAKVAKLAIRDGKMPIQVGAIAEWTKARDLPDAEGESFRSWFKNR
>Mature_466_residues
SIKTSHLKFKPRINEEIQNDIMRKAVVMAQERIGANRQKMVEELGHWEEWREHAKEIRNHVIENLDAYLYQLSEKVIQNG
GHVYFAATAEDATNYIKNVAKQKNAKKIVKSKSMVTEEIGMNHVLEAEGIKVVETDLGEYILQVAEDKPSHIVVPAIHKD
RHQIRKVLAEKLGYTGSDTPEEMTLFIRETIRNDFLEADIGVSGCNFAVAETGSVCLVTNEGNLRLATSLPKTHIAVMGM
ERLAPTFKEVDVLITLLARSAVGARLTGYNTWLTGPRLAGETDGPEEFHLVIVDNGRSKMLGSEFREVLRCIRCGACLNT
CPAYRQIGGHGYGSIYPGPIGSVISPILGGYEEFKDLPSACSLCTACNQVCPVKIPLANLLLKHRRHIAESGMNPLAERL
SVKAFTLANSHPSLWKIGMNVGAKVAKLAIRDGKMPIQVGAIAEWTKARDLPDAEGESFRSWFKNR

Specific function: Unknown

COG id: COG1139

COG function: function code C; Uncharacterized conserved protein containing a ferredoxin-like domain

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]

Homologues:

Organism=Escherichia coli, GI1786498, Length=465, Percent_Identity=74.4086021505376, Blast_Score=754, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR003741
- InterPro:   IPR004452
- InterPro:   IPR002698
- InterPro:   IPR012285
- InterPro:   IPR009051 [H]

Pfam domain/function: PF02589 DUF162 [H]

EC number: NA

Molecular weight: Translated: 51822; Mature: 51691

Theoretical pI: Translated: 8.12; Mature: 8.12

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIKTSHLKFKPRINEEIQNDIMRKAVVMAQERIGANRQKMVEELGHWEEWREHAKEIRN
CCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCHHHHHHHHHHHHH
HVIENLDAYLYQLSEKVIQNGGHVYFAATAEDATNYIKNVAKQKNAKKIVKSKSMVTEEI
HHHHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GMNHVLEAEGIKVVETDLGEYILQVAEDKPSHIVVPAIHKDRHQIRKVLAEKLGYTGSDT
CCCCEECCCCCEEEHHHHHHHHHHHHCCCCCEEEEECHHHHHHHHHHHHHHHCCCCCCCC
PEEMTLFIRETIRNDFLEADIGVSGCNFAVAETGSVCLVTNEGNLRLATSLPKTHIAVMG
HHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCEEEEECCCCEEEEECCCCHHHHHHH
MERLAPTFKEVDVLITLLARSAVGARLTGYNTWLTGPRLAGETDGPEEFHLVIVDNGRSK
HHHHCCHHHHHHHHHHHHHHHHHCCEECCCCCCCCCCCCCCCCCCCCCEEEEEEECCCHH
MLGSEFREVLRCIRCGACLNTCPAYRQIGGHGYGSIYPGPIGSVISPILGGYEEFKDLPS
HHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCHHHHHHHHHCCHHHHHCCHH
ACSLCTACNQVCPVKIPLANLLLKHRRHIAESGMNPLAERLSVKAFTLANSHPSLWKIGM
HHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHEEEEECCCCCCEEECH
NVGAKVAKLAIRDGKMPIQVGAIAEWTKARDLPDAEGESFRSWFKNR
HHCHHHHHHHHHCCCCCEEECCHHHHHHHCCCCCCCCHHHHHHHCCC
>Mature Secondary Structure 
SIKTSHLKFKPRINEEIQNDIMRKAVVMAQERIGANRQKMVEELGHWEEWREHAKEIRN
CCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCHHHHHHHHHHHHH
HVIENLDAYLYQLSEKVIQNGGHVYFAATAEDATNYIKNVAKQKNAKKIVKSKSMVTEEI
HHHHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GMNHVLEAEGIKVVETDLGEYILQVAEDKPSHIVVPAIHKDRHQIRKVLAEKLGYTGSDT
CCCCEECCCCCEEEHHHHHHHHHHHHCCCCCEEEEECHHHHHHHHHHHHHHHCCCCCCCC
PEEMTLFIRETIRNDFLEADIGVSGCNFAVAETGSVCLVTNEGNLRLATSLPKTHIAVMG
HHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCEEEEECCCCEEEEECCCCHHHHHHH
MERLAPTFKEVDVLITLLARSAVGARLTGYNTWLTGPRLAGETDGPEEFHLVIVDNGRSK
HHHHCCHHHHHHHHHHHHHHHHHCCEECCCCCCCCCCCCCCCCCCCCCEEEEEEECCCHH
MLGSEFREVLRCIRCGACLNTCPAYRQIGGHGYGSIYPGPIGSVISPILGGYEEFKDLPS
HHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCHHHHHHHHHCCHHHHHCCHH
ACSLCTACNQVCPVKIPLANLLLKHRRHIAESGMNPLAERLSVKAFTLANSHPSLWKIGM
HHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHEEEEECCCCCCEEECH
NVGAKVAKLAIRDGKMPIQVGAIAEWTKARDLPDAEGESFRSWFKNR
HHCHHHHHHHHHCCCCCEEECCHHHHHHHCCCCCCCCHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]