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The map label for this gene is yihI

Identifier: 15603700

GI number: 15603700

Start: 2073018

End: 2073587

Strand: Reverse

Name: yihI

Synonym: PM1835

Alternate gene names: 15603700

Gene position: 2073587-2073018 (Counterclockwise)

Preceding gene: 15603701

Following gene: 15603699

Centisome position: 91.85

GC content: 39.65

Gene sequence:

>570_bases
ATGGCTCGTAAGAAGAAAACACGCCGCGTTAGCGATATTATGCCGGCTCGTAAAGTCGATAAAAAAGTCGAATTGCCAAA
AGGAAAACAGGGCAAGAAATTAACACGCTATGAATTAGATGCCAAAGCGCGTGAAGACAAAAAGAAAAAGAAACGCAAAG
GCTTAGCCTCAGGCTCTCGTCATAGTGCCACAGAAAACAATAACAATCATCAAGCGCTAGCGAAAAAAGATCCGCGCCTT
GGTAGCCGTAAAAAAGTGCCTTTAATTGTGGAATTCGTGAATAAGCCAGAAAAAGGCATGACTATTCCACCGATGAAAGT
GGAAGAAAAAGTGGCGAAACTAGATCCAATGTTGGAATTAGAACAATTGGAAAATAATGAATGCCTTAACCAATTATTAG
ATGCGTTAGATGCAGGCAAAACGCTAAGTGCAGAAGATCAACAATTTGTCGATGACTGTTTAGATCGTATTGCACAATTA
ATGGACGAGCTAGGCATTTCAGAAGATGACGATCCTGAAGAAGATCTCTTACGCACCTTTGAAAAAATCGATATTAACCA
ATTTAGATAA

Upstream 100 bases:

>100_bases
AGAATGGCTAAGCTTTAGTGCGCCACCTGCGTTTTAATTAAGTAAAACCGATTTTAAATGGTACAATCTACCATCAACGA
TGAATGAAAGAGAAAAGATT

Downstream 100 bases:

>100_bases
GTATGATGTGGACGAACATTTTATTGATTCTTGCCGTGCTGGTTATTGTGGCAATGGCGAGCTATGCGGGCTACTTATTA
TTGGCATTGCAAAAGCAGAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 189; Mature: 188

Protein sequence:

>189_residues
MARKKKTRRVSDIMPARKVDKKVELPKGKQGKKLTRYELDAKAREDKKKKKRKGLASGSRHSATENNNNHQALAKKDPRL
GSRKKVPLIVEFVNKPEKGMTIPPMKVEEKVAKLDPMLELEQLENNECLNQLLDALDAGKTLSAEDQQFVDDCLDRIAQL
MDELGISEDDDPEEDLLRTFEKIDINQFR

Sequences:

>Translated_189_residues
MARKKKTRRVSDIMPARKVDKKVELPKGKQGKKLTRYELDAKAREDKKKKKRKGLASGSRHSATENNNNHQALAKKDPRL
GSRKKVPLIVEFVNKPEKGMTIPPMKVEEKVAKLDPMLELEQLENNECLNQLLDALDAGKTLSAEDQQFVDDCLDRIAQL
MDELGISEDDDPEEDLLRTFEKIDINQFR
>Mature_188_residues
ARKKKTRRVSDIMPARKVDKKVELPKGKQGKKLTRYELDAKAREDKKKKKRKGLASGSRHSATENNNNHQALAKKDPRLG
SRKKVPLIVEFVNKPEKGMTIPPMKVEEKVAKLDPMLELEQLENNECLNQLLDALDAGKTLSAEDQQFVDDCLDRIAQLM
DELGISEDDDPEEDLLRTFEKIDINQFR

Specific function: A GTPase-activating protein (GAP) that modifies Der/EngA GTPase function. May play a role in ribosome biogenesis

COG id: COG3078

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the YihI family

Homologues:

Organism=Escherichia coli, GI1790297, Length=135, Percent_Identity=45.9259259259259, Blast_Score=87, Evalue=9e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YIHI_PASMU (Q9CK03)

Other databases:

- EMBL:   AE004439
- RefSeq:   NP_246774.1
- GeneID:   1245182
- GenomeReviews:   AE004439_GR
- KEGG:   pmu:PM1835
- NMPDR:   fig|272843.1.peg.1836
- HOGENOM:   HBG303443
- OMA:   AQKKDPR
- ProtClustDB:   PRK05244
- BioCyc:   PMUL272843:PM1835-MONOMER
- HAMAP:   MF_01058
- InterPro:   IPR007336

Pfam domain/function: PF04220 DUF414

EC number: NA

Molecular weight: Translated: 21636; Mature: 21505

Theoretical pI: Translated: 9.67; Mature: 9.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARKKKTRRVSDIMPARKVDKKVELPKGKQGKKLTRYELDAKAREDKKKKKRKGLASGSR
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCC
HSATENNNNHQALAKKDPRLGSRKKVPLIVEFVNKPEKGMTIPPMKVEEKVAKLDPMLEL
CCCCCCCCCCHHHHHCCCCCCCCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHCHHHHH
EQLENNECLNQLLDALDAGKTLSAEDQQFVDDCLDRIAQLMDELGISEDDDPEEDLLRTF
HHHCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH
EKIDINQFR
HHHHHHCCC
>Mature Secondary Structure 
ARKKKTRRVSDIMPARKVDKKVELPKGKQGKKLTRYELDAKAREDKKKKKRKGLASGSR
CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCC
HSATENNNNHQALAKKDPRLGSRKKVPLIVEFVNKPEKGMTIPPMKVEEKVAKLDPMLEL
CCCCCCCCCCHHHHHCCCCCCCCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHCHHHHH
EQLENNECLNQLLDALDAGKTLSAEDQQFVDDCLDRIAQLMDELGISEDDDPEEDLLRTF
HHHCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH
EKIDINQFR
HHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11248100