| Definition | Pasteurella multocida subsp. multocida str. Pm70, complete genome. |
|---|---|
| Accession | NC_002663 |
| Length | 2,257,487 |
Click here to switch to the map view.
The map label for this gene is 15603643
Identifier: 15603643
GI number: 15603643
Start: 2002577
End: 2003137
Strand: Direct
Name: 15603643
Synonym: PM1778
Alternate gene names: NA
Gene position: 2002577-2003137 (Clockwise)
Preceding gene: 15603642
Following gene: 15603644
Centisome position: 88.71
GC content: 40.82
Gene sequence:
>561_bases ATGCTATTCAAAATATCCGATTTATTTAAAAAAATTGAGCTAAAACGCTTTACAAAGTGCGGTTCGTTTTGGCATTATTT AGACGTTAGTGCAAAATCACTAGCCGAGCGTGGAAACTCGAATAATAAACATACGGCGAACAGTAGCACGCCATTTAACC GTGCTTTTTTTGTTCGTGAAGTTCGCACACCTAAAATAAATCCAGCAATGGATCTATTCTCAATGGTAGCGTGCGATTGG CAACGTTTAATCGTTGGCTGTGTTCCGTATGTCGCAGTTTTCCACCCAGTCGCACGTTACCGCCCTAAAGCGTGGAAACT TTTAGCGGTAACTCTCAATAATTTTACATACGGAGTTACGCAAATGATTTATCAATTCATTGGCATCTCACGCCAACACT ACGACCAAACCAAAGCGGAACAAATCCGCATATTAGCTGATAACGAAACCCAAGCTAGAGCCTATTTAGCGCGTAATTAT GTGCTTATTCCTTTAGGTCGCTTACCAAACACCGCAAAAAATGACCGTACTTTAGAGGTTAAAGGGGGTATTTATGCGTA A
Upstream 100 bases:
>100_bases AAAATGATTAAAAAATCCAGAAAACAAAAAACCTCACCGAGTTTAGCTCAATGAGGCTTTGGAGTGAAATCAATATCTAG GCAAAAAGGATTATATCAAA
Downstream 100 bases:
>100_bases TGTGAAAAAAGCATTGTCAAGATCTGTTATTGCTAGTAGTATTCAAGGTACTACTAAAACCAACGGCGGACACCGCAGCC GTCACTCAAGCGGTATTTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 186; Mature: 186
Protein sequence:
>186_residues MLFKISDLFKKIELKRFTKCGSFWHYLDVSAKSLAERGNSNNKHTANSSTPFNRAFFVREVRTPKINPAMDLFSMVACDW QRLIVGCVPYVAVFHPVARYRPKAWKLLAVTLNNFTYGVTQMIYQFIGISRQHYDQTKAEQIRILADNETQARAYLARNY VLIPLGRLPNTAKNDRTLEVKGGIYA
Sequences:
>Translated_186_residues MLFKISDLFKKIELKRFTKCGSFWHYLDVSAKSLAERGNSNNKHTANSSTPFNRAFFVREVRTPKINPAMDLFSMVACDW QRLIVGCVPYVAVFHPVARYRPKAWKLLAVTLNNFTYGVTQMIYQFIGISRQHYDQTKAEQIRILADNETQARAYLARNY VLIPLGRLPNTAKNDRTLEVKGGIYA >Mature_186_residues MLFKISDLFKKIELKRFTKCGSFWHYLDVSAKSLAERGNSNNKHTANSSTPFNRAFFVREVRTPKINPAMDLFSMVACDW QRLIVGCVPYVAVFHPVARYRPKAWKLLAVTLNNFTYGVTQMIYQFIGISRQHYDQTKAEQIRILADNETQARAYLARNY VLIPLGRLPNTAKNDRTLEVKGGIYA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21428; Mature: 21428
Theoretical pI: Translated: 10.42; Mature: 10.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLFKISDLFKKIELKRFTKCGSFWHYLDVSAKSLAERGNSNNKHTANSSTPFNRAFFVRE CEEEHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHEEEE VRTPKINPAMDLFSMVACDWQRLIVGCVPYVAVFHPVARYRPKAWKLLAVTLNNFTYGVT CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHEEEEEEECCCHHHHH QMIYQFIGISRQHYDQTKAEQIRILADNETQARAYLARNYVLIPLGRLPNTAKNDRTLEV HHHHHHHCCCHHHHHHHHHHEEEEEECCCHHHHHHHHCCEEEEECCCCCCCCCCCCEEEE KGGIYA CCCCCC >Mature Secondary Structure MLFKISDLFKKIELKRFTKCGSFWHYLDVSAKSLAERGNSNNKHTANSSTPFNRAFFVRE CEEEHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHEEEE VRTPKINPAMDLFSMVACDWQRLIVGCVPYVAVFHPVARYRPKAWKLLAVTLNNFTYGVT CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHEEEEEEECCCHHHHH QMIYQFIGISRQHYDQTKAEQIRILADNETQARAYLARNYVLIPLGRLPNTAKNDRTLEV HHHHHHHCCCHHHHHHHHHHEEEEEECCCHHHHHHHHCCEEEEECCCCCCCCCCCCEEEE KGGIYA CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA