| Definition | Pasteurella multocida subsp. multocida str. Pm70, complete genome. |
|---|---|
| Accession | NC_002663 |
| Length | 2,257,487 |
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The map label for this gene is 15603636
Identifier: 15603636
GI number: 15603636
Start: 1998080
End: 1999222
Strand: Direct
Name: 15603636
Synonym: PM1771
Alternate gene names: NA
Gene position: 1998080-1999222 (Clockwise)
Preceding gene: 15603635
Following gene: 15603637
Centisome position: 88.51
GC content: 27.91
Gene sequence:
>1143_bases ATGATGGAAAATCAAGAGTTTTTATCTTTGGATGAAGCTGTTTTATTATCAAATAAATTCAATTTGAATTTTTCAAAAGA AGATATTTTATATTTGTCCTCATTAGATCATTTTAAAGCTTACAATAATATTCAATACGTATATATGGGAGATGTTCAGA AACCTGTGTACAAAATACATGGTTTAAAAGGATTTTTTAAAACAAGATTAGAAACAAAAAGTAGATTACTCTTACAGGAG TTGGATATTATTAGAACTAATGATAGTTATGTCATTGATAAGAAAAAGGAACAGGGCTTTTCTAGAGATATTTGGACTAT AAAAGAACGTAATAATTTGAAGAGTGTTTTGTACCTTCACCTTTCGAATAGATATGATGATTTATATTTTATTGATTATG GTTTTGCCAGTGTGACATTGCCTATTTATGAAGAGAGAGTTAAAAAACACGATATTGTAAAAGGAATGGTTGAAAGTACG ATGTTATCTAACATAGCAATTAGAAATAAGCCTCAAAATGCTAAATTGTTCGTATCTTTTTTATCTAAAAGTTTAACTAA TCATTATGTTCCAAATTCTAGCTTTGATATATTTGAATTTAATATAGCTGGAATAATAGATTATCCTTTTAGTCTTGAAC CTTATATATTAAGTTATAAAGAAAAAGAAGATGATGATTTATTGGAGCTTTACAATGAATATAATTTTGATGAAATTTTC TATTTTAAACATACTGATTTATTAGAATATTTCCAAAAAATAATTGATAAGGAAGAAAAAATACAGAAATCCTATCAATA TCAAACAGAGCTAATTACAGAATTACAAGGACGTATAGCAGAACTTGAAAAAGAAAATCAGAGCTTAAAAGAAAATGTAA AAGAGCCAGAAACAAGCAAGCCAATTAGACCAGATGAGAAAGAAACATTACTGAAGTTAATCTATGCTCTTGCAATGGGG AGAACGGATAAAGACTTTTCAGCATCTGCGTATTTTAATAAAAAAGGAGTTTTAAAAGTTAGTACTATGATTAATGAAAT CGTAGCAGATCTAGAACAGGTGGGAATCATGAATTTTTCTGATGGAACTCTTCGCAAAAGGCTGTCTGAAATATTACAAA TGGGCGAATTAAAGGCGGATTAA
Upstream 100 bases:
>100_bases GTGCAACTAGGAGCGGACTAATTACCCGAGCCGAAAGAGAACAACCCTATTTGTTCTTTGTTGCACTCTCACTAAATAGG GCAACACATAGGGGTGTTTT
Downstream 100 bases:
>100_bases TACCGTCTTTTTTATTTTACAAAAATCTTTCCAAAATCTCATAAAATGTCCAAATCTCAGAAAATTCTGTAACTTCAAGG CATTAATTAATAATCAAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 380; Mature: 380
Protein sequence:
>380_residues MMENQEFLSLDEAVLLSNKFNLNFSKEDILYLSSLDHFKAYNNIQYVYMGDVQKPVYKIHGLKGFFKTRLETKSRLLLQE LDIIRTNDSYVIDKKKEQGFSRDIWTIKERNNLKSVLYLHLSNRYDDLYFIDYGFASVTLPIYEERVKKHDIVKGMVEST MLSNIAIRNKPQNAKLFVSFLSKSLTNHYVPNSSFDIFEFNIAGIIDYPFSLEPYILSYKEKEDDDLLELYNEYNFDEIF YFKHTDLLEYFQKIIDKEEKIQKSYQYQTELITELQGRIAELEKENQSLKENVKEPETSKPIRPDEKETLLKLIYALAMG RTDKDFSASAYFNKKGVLKVSTMINEIVADLEQVGIMNFSDGTLRKRLSEILQMGELKAD
Sequences:
>Translated_380_residues MMENQEFLSLDEAVLLSNKFNLNFSKEDILYLSSLDHFKAYNNIQYVYMGDVQKPVYKIHGLKGFFKTRLETKSRLLLQE LDIIRTNDSYVIDKKKEQGFSRDIWTIKERNNLKSVLYLHLSNRYDDLYFIDYGFASVTLPIYEERVKKHDIVKGMVEST MLSNIAIRNKPQNAKLFVSFLSKSLTNHYVPNSSFDIFEFNIAGIIDYPFSLEPYILSYKEKEDDDLLELYNEYNFDEIF YFKHTDLLEYFQKIIDKEEKIQKSYQYQTELITELQGRIAELEKENQSLKENVKEPETSKPIRPDEKETLLKLIYALAMG RTDKDFSASAYFNKKGVLKVSTMINEIVADLEQVGIMNFSDGTLRKRLSEILQMGELKAD >Mature_380_residues MMENQEFLSLDEAVLLSNKFNLNFSKEDILYLSSLDHFKAYNNIQYVYMGDVQKPVYKIHGLKGFFKTRLETKSRLLLQE LDIIRTNDSYVIDKKKEQGFSRDIWTIKERNNLKSVLYLHLSNRYDDLYFIDYGFASVTLPIYEERVKKHDIVKGMVEST MLSNIAIRNKPQNAKLFVSFLSKSLTNHYVPNSSFDIFEFNIAGIIDYPFSLEPYILSYKEKEDDDLLELYNEYNFDEIF YFKHTDLLEYFQKIIDKEEKIQKSYQYQTELITELQGRIAELEKENQSLKENVKEPETSKPIRPDEKETLLKLIYALAMG RTDKDFSASAYFNKKGVLKVSTMINEIVADLEQVGIMNFSDGTLRKRLSEILQMGELKAD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y1771_PASMU (Q9CK63)
Other databases:
- EMBL: AE004439 - RefSeq: NP_246710.1 - GeneID: 1245118 - GenomeReviews: AE004439_GR - KEGG: pmu:PM1771 - NMPDR: fig|272843.1.peg.1772 - BioCyc: PMUL272843:PM1771-MONOMER
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44697; Mature: 44697
Theoretical pI: Translated: 5.15; Mature: 5.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMENQEFLSLDEAVLLSNKFNLNFSKEDILYLSSLDHFKAYNNIQYVYMGDVQKPVYKIH CCCCCHHHHHHHHHHCCCCCCCCCCCCCEEEECCCHHHHHHCCEEEEEECCCCCHHHHHH GLKGFFKTRLETKSRLLLQELDIIRTNDSYVIDKKKEQGFSRDIWTIKERNNLKSVLYLH CCHHHHHHHHHHHHHHHHHHHHEEECCCCEEEECHHHCCCCCCCEEECCCCCCEEEEEEE LSNRYDDLYFIDYGFASVTLPIYEERVKKHDIVKGMVESTMLSNIAIRNKPQNAKLFVSF ECCCCCCEEEEEECCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH LSKSLTNHYVPNSSFDIFEFNIAGIIDYPFSLEPYILSYKEKEDDDLLELYNEYNFDEIF HHHHHHHCCCCCCCCEEEEEEEEEEEECCCCCCCCEEECCCCCCHHHHHHHHHCCCCEEE YFKHTDLLEYFQKIIDKEEKIQKSYQYQTELITELQGRIAELEKENQSLKENVKEPETSK EEECHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC PIRPDEKETLLKLIYALAMGRTDKDFSASAYFNKKGVLKVSTMINEIVADLEQVGIMNFS CCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHCCCCCC DGTLRKRLSEILQMGELKAD CHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MMENQEFLSLDEAVLLSNKFNLNFSKEDILYLSSLDHFKAYNNIQYVYMGDVQKPVYKIH CCCCCHHHHHHHHHHCCCCCCCCCCCCCEEEECCCHHHHHHCCEEEEEECCCCCHHHHHH GLKGFFKTRLETKSRLLLQELDIIRTNDSYVIDKKKEQGFSRDIWTIKERNNLKSVLYLH CCHHHHHHHHHHHHHHHHHHHHEEECCCCEEEECHHHCCCCCCCEEECCCCCCEEEEEEE LSNRYDDLYFIDYGFASVTLPIYEERVKKHDIVKGMVESTMLSNIAIRNKPQNAKLFVSF ECCCCCCEEEEEECCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH LSKSLTNHYVPNSSFDIFEFNIAGIIDYPFSLEPYILSYKEKEDDDLLELYNEYNFDEIF HHHHHHHCCCCCCCCEEEEEEEEEEEECCCCCCCCEEECCCCCCHHHHHHHHHCCCCEEE YFKHTDLLEYFQKIIDKEEKIQKSYQYQTELITELQGRIAELEKENQSLKENVKEPETSK EEECHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC PIRPDEKETLLKLIYALAMGRTDKDFSASAYFNKKGVLKVSTMINEIVADLEQVGIMNFS CCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHCCCCCC DGTLRKRLSEILQMGELKAD CHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11248100