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The map label for this gene is gntR_1 [H]

Identifier: 15603629

GI number: 15603629

Start: 1988017

End: 1988724

Strand: Direct

Name: gntR_1 [H]

Synonym: PM1764

Alternate gene names: 15603629

Gene position: 1988017-1988724 (Clockwise)

Preceding gene: 15603623

Following gene: 15603630

Centisome position: 88.06

GC content: 36.86

Gene sequence:

>708_bases
ATGGATAAATTAACAAAAAAAGCGGCTTCTCTGGCATTACAAGAGAAGATAAAAACATTAATTATTCGACGGAAAATGAA
GTCGGGCGATCTGATGCCGACAGAAAATGAGCTCATTGATTTATTTGGAGTAAGTCGCTCTAGCTTACGAGAAGCGATTA
AGTCGTTAGAAGCATTGCATATTTTAGATATCCACCATGGTATAGGTACATTTGTCGGCACTTCTTCGCTTATTCCTATG
ATACGTGGCTTAACGTTTTATGCTCAGTTACATTTACAAGATAATTTAAAGAGTATTTTGGATATTCTGGATGTGAGGGA
AATCCTACAATATGGTTTTGCCCCTATTGCACTGCAGAAAATCAATGCTGAAGAGGTGTTGCAATTACAAAGTTTGGTTC
GTTTATTGGAAGAAAACGCACAACAAGGACGGTTTTCCATAAAAGAAGAGCAACAAATCCATTTATTAATGTATCAGTCT
GTACAAAACCATTTATTGACTCAATATTTAGATGCATTTTGGCAAATTTATCAGCAGCTTGATGCGGAATTGCCCGCAAT
TTTAATTTCACCGACGGATCTTGCAATGCAATATCGTGAATGGGTTGATGCGATTGAAGCACGCGATTTAGAACGTGTAC
AACGCGCTGTTTTATATTATTTTCAGGCTATTAGACAACGTTTAACACAAGGAAAAGCACATGAGTAA

Upstream 100 bases:

>100_bases
CGGAATGAATAACATGATTATGCTTTAATTTAATTGAGACATATGATGTCTTATCTTTAATTAAAGATAAAGAGATCCAG
ATCACAAAAATGAGAAAACT

Downstream 100 bases:

>100_bases
CATTAAAATCGCTTTGATTGGCTGTGGTTTTTTCGGACAGCAATTAGCATTAGGTTTCACAAAAGCTGGCGCAGACTTAC
TTGGTGTGACTGATCTTTCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 235; Mature: 235

Protein sequence:

>235_residues
MDKLTKKAASLALQEKIKTLIIRRKMKSGDLMPTENELIDLFGVSRSSLREAIKSLEALHILDIHHGIGTFVGTSSLIPM
IRGLTFYAQLHLQDNLKSILDILDVREILQYGFAPIALQKINAEEVLQLQSLVRLLEENAQQGRFSIKEEQQIHLLMYQS
VQNHLLTQYLDAFWQIYQQLDAELPAILISPTDLAMQYREWVDAIEARDLERVQRAVLYYFQAIRQRLTQGKAHE

Sequences:

>Translated_235_residues
MDKLTKKAASLALQEKIKTLIIRRKMKSGDLMPTENELIDLFGVSRSSLREAIKSLEALHILDIHHGIGTFVGTSSLIPM
IRGLTFYAQLHLQDNLKSILDILDVREILQYGFAPIALQKINAEEVLQLQSLVRLLEENAQQGRFSIKEEQQIHLLMYQS
VQNHLLTQYLDAFWQIYQQLDAELPAILISPTDLAMQYREWVDAIEARDLERVQRAVLYYFQAIRQRLTQGKAHE
>Mature_235_residues
MDKLTKKAASLALQEKIKTLIIRRKMKSGDLMPTENELIDLFGVSRSSLREAIKSLEALHILDIHHGIGTFVGTSSLIPM
IRGLTFYAQLHLQDNLKSILDILDVREILQYGFAPIALQKINAEEVLQLQSLVRLLEENAQQGRFSIKEEQQIHLLMYQS
VQNHLLTQYLDAFWQIYQQLDAELPAILISPTDLAMQYREWVDAIEARDLERVQRAVLYYFQAIRQRLTQGKAHE

Specific function: Transcriptional Repressor For The Pyruvate Dehydrogenase Complex Genes ACEef And Lpd. [C]

COG id: COG2186

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH gntR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011711
- InterPro:   IPR000524
- InterPro:   IPR011991 [H]

Pfam domain/function: PF07729 FCD; PF00392 GntR [H]

EC number: NA

Molecular weight: Translated: 27124; Mature: 27124

Theoretical pI: Translated: 6.64; Mature: 6.64

Prosite motif: PS50949 HTH_GNTR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKLTKKAASLALQEKIKTLIIRRKMKSGDLMPTENELIDLFGVSRSSLREAIKSLEALH
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHH
ILDIHHGIGTFVGTSSLIPMIRGLTFYAQLHLQDNLKSILDILDVREILQYGFAPIALQK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
INAEEVLQLQSLVRLLEENAQQGRFSIKEEQQIHLLMYQSVQNHLLTQYLDAFWQIYQQL
CCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DAELPAILISPTDLAMQYREWVDAIEARDLERVQRAVLYYFQAIRQRLTQGKAHE
CCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MDKLTKKAASLALQEKIKTLIIRRKMKSGDLMPTENELIDLFGVSRSSLREAIKSLEALH
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHH
ILDIHHGIGTFVGTSSLIPMIRGLTFYAQLHLQDNLKSILDILDVREILQYGFAPIALQK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
INAEEVLQLQSLVRLLEENAQQGRFSIKEEQQIHLLMYQSVQNHLLTQYLDAFWQIYQQL
CCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DAELPAILISPTDLAMQYREWVDAIEARDLERVQRAVLYYFQAIRQRLTQGKAHE
CCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7704254; 9384377 [H]