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The map label for this gene is yjhC [C]

Identifier: 15603624

GI number: 15603624

Start: 1982349

End: 1983452

Strand: Reverse

Name: yjhC [C]

Synonym: PM1759

Alternate gene names: 15603624

Gene position: 1983452-1982349 (Counterclockwise)

Preceding gene: 15603625

Following gene: 15603616

Centisome position: 87.86

GC content: 41.12

Gene sequence:

>1104_bases
ATGATGAAATATGGTGTTGTGGGTGTAGGTTACTTTGGTGCGGATTTAGCACGCTTTATGAACGAAAATGAAAATGCCAA
AGTGACCATGGTATATGATCCAGAAAATGGAGAAACGATTGCTAAAGAACTTCAATGTATTGCCGCGACGAGCCTGAAAC
AACTGGTCAGTAGCCCAGAGGTAGATTGTGTCATCGTAGCTACACCAAATTATCTGCACAAAGAACCCGTCATTGAAGCC
GCTAAGCATGGTAAACATGTTTTTTGTGAAAAACCTATCGCACTTAACTACCAAGATTGCGATGAAATGGTGAGAACTTG
TGAAGAAAATGGCGTCATCTTTATGGCAGGTCATGTCATGAATTTCTTTAATGGTGTTCATCATGCCAAAGAATTGATCA
AACAAGGAGTGATTGGTAAAGTCCTCTATTGCCATTCTGCACGAAACGGTTGGGAAGATGAACAGCCAAGTATTTCATGG
AAAAAAATTCGTGCAAAATCAGGTGGGCATTTATACCACCATATTCATGAACTAGATTGTATTCAGTTCATTATGGGAGG
TATGCCGAAAACTGTTACGATGACGGCAGGTAATGTGGCACATCAAAGTGAAAAATTTGGTGACGAGGACGATATGTTAT
TCCTCAATTTAGAATTTGAGGGCGGTCGTTTTGCCGTATTAGAGTGGGGCTCCGCTTTCCGTTGGGGTGAACATTATGTT
CTTATCCAAGGTGAAAAAGGCGCAATTAAATTAGACATGTACCACTGTAAAGGCACATTACGTGTTGATGGCAAAGATAG
CCATTTCTTAATTCATGAAACACAAGAGGAGGATGATGATCGTACGCGTATCTATACCAGTACCGAAATGGATGGCGCGA
TCCAATATGGTAAACCAGGTAAGCGTACCCCAATGTGGCTCAGTTCTATTATGAAAAAAGAGATGAAATACTTAAATGAT
ATTTTACATGGTATGAAACCGACTGAAGAATTCGAGAAATTACTCACAGGGGAAGCTGCAAGAGCTGCCATTGCCACCGC
AGATGCCTGCACCAAATCTCGCTATGAAAACCGCAAAGTTGAGGTTGCCGAAATTACAGGTTAA

Upstream 100 bases:

>100_bases
CTGTTATCTTCTTTTGCTTTATCCAAAACAAAATTGCTAGTGGATTATCTGAAGGTTCGGTGAAATAAAATTTATTTATC
GTAAGATTAGGAGAATAAAA

Downstream 100 bases:

>100_bases
AACGTGAGTCACTCATGCGAATAAATCAAGAATCATGTGCTGTCTTAAAAGCACAATTAGGTTAGTTGGGGCGTTATACG
CCCCTTTTTTCTGGCTTCCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 367; Mature: 367

Protein sequence:

>367_residues
MMKYGVVGVGYFGADLARFMNENENAKVTMVYDPENGETIAKELQCIAATSLKQLVSSPEVDCVIVATPNYLHKEPVIEA
AKHGKHVFCEKPIALNYQDCDEMVRTCEENGVIFMAGHVMNFFNGVHHAKELIKQGVIGKVLYCHSARNGWEDEQPSISW
KKIRAKSGGHLYHHIHELDCIQFIMGGMPKTVTMTAGNVAHQSEKFGDEDDMLFLNLEFEGGRFAVLEWGSAFRWGEHYV
LIQGEKGAIKLDMYHCKGTLRVDGKDSHFLIHETQEEDDDRTRIYTSTEMDGAIQYGKPGKRTPMWLSSIMKKEMKYLND
ILHGMKPTEEFEKLLTGEAARAAIATADACTKSRYENRKVEVAEITG

Sequences:

>Translated_367_residues
MMKYGVVGVGYFGADLARFMNENENAKVTMVYDPENGETIAKELQCIAATSLKQLVSSPEVDCVIVATPNYLHKEPVIEA
AKHGKHVFCEKPIALNYQDCDEMVRTCEENGVIFMAGHVMNFFNGVHHAKELIKQGVIGKVLYCHSARNGWEDEQPSISW
KKIRAKSGGHLYHHIHELDCIQFIMGGMPKTVTMTAGNVAHQSEKFGDEDDMLFLNLEFEGGRFAVLEWGSAFRWGEHYV
LIQGEKGAIKLDMYHCKGTLRVDGKDSHFLIHETQEEDDDRTRIYTSTEMDGAIQYGKPGKRTPMWLSSIMKKEMKYLND
ILHGMKPTEEFEKLLTGEAARAAIATADACTKSRYENRKVEVAEITG
>Mature_367_residues
MMKYGVVGVGYFGADLARFMNENENAKVTMVYDPENGETIAKELQCIAATSLKQLVSSPEVDCVIVATPNYLHKEPVIEA
AKHGKHVFCEKPIALNYQDCDEMVRTCEENGVIFMAGHVMNFFNGVHHAKELIKQGVIGKVLYCHSARNGWEDEQPSISW
KKIRAKSGGHLYHHIHELDCIQFIMGGMPKTVTMTAGNVAHQSEKFGDEDDMLFLNLEFEGGRFAVLEWGSAFRWGEHYV
LIQGEKGAIKLDMYHCKGTLRVDGKDSHFLIHETQEEDDDRTRIYTSTEMDGAIQYGKPGKRTPMWLSSIMKKEMKYLND
ILHGMKPTEEFEKLLTGEAARAAIATADACTKSRYENRKVEVAEITG

Specific function: Unknown

COG id: COG0673

COG function: function code R; Predicted dehydrogenases and related proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gfo/idh/mocA family [H]

Homologues:

Organism=Escherichia coli, GI87082405, Length=365, Percent_Identity=65.2054794520548, Blast_Score=525, Evalue=1e-150,
Organism=Drosophila melanogaster, GI24581117, Length=229, Percent_Identity=27.0742358078603, Blast_Score=79, Evalue=6e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR000683
- InterPro:   IPR004104 [H]

Pfam domain/function: PF01408 GFO_IDH_MocA; PF02894 GFO_IDH_MocA_C [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 41352; Mature: 41352

Theoretical pI: Translated: 6.16; Mature: 6.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
7.1 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
7.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMKYGVVGVGYFGADLARFMNENENAKVTMVYDPENGETIAKELQCIAATSLKQLVSSPE
CCCEEEEEECHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCC
VDCVIVATPNYLHKEPVIEAAKHGKHVFCEKPIALNYQDCDEMVRTCEENGVIFMAGHVM
CCEEEEECCCCCCCCHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHHHCCEEEEEHHHH
NFFNGVHHAKELIKQGVIGKVLYCHSARNGWEDEQPSISWKKIRAKSGGHLYHHIHELDC
HHHHHHHHHHHHHHCCCHHEEEEEECCCCCCCCCCCCCCHHEEECCCCCCHHHHHHHHHH
IQFIMGGMPKTVTMTAGNVAHQSEKFGDEDDMLFLNLEFEGGRFAVLEWGSAFRWGEHYV
HHHHHCCCCCEEEEECCCHHHHHHHCCCCCCEEEEEEEECCCEEEEEECCCCCCCCCEEE
LIQGEKGAIKLDMYHCKGTLRVDGKDSHFLIHETQEEDDDRTRIYTSTEMDGAIQYGKPG
EEECCCCEEEEEEEECCEEEEECCCCCEEEEECCCCCCCCCEEEEEECCCCCCEECCCCC
KRTPMWLSSIMKKEMKYLNDILHGMKPTEEFEKLLTGEAARAAIATADACTKSRYENRKV
CCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCE
EVAEITG
EEEEECC
>Mature Secondary Structure
MMKYGVVGVGYFGADLARFMNENENAKVTMVYDPENGETIAKELQCIAATSLKQLVSSPE
CCCEEEEEECHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCC
VDCVIVATPNYLHKEPVIEAAKHGKHVFCEKPIALNYQDCDEMVRTCEENGVIFMAGHVM
CCEEEEECCCCCCCCHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHHHCCEEEEEHHHH
NFFNGVHHAKELIKQGVIGKVLYCHSARNGWEDEQPSISWKKIRAKSGGHLYHHIHELDC
HHHHHHHHHHHHHHCCCHHEEEEEECCCCCCCCCCCCCCHHEEECCCCCCHHHHHHHHHH
IQFIMGGMPKTVTMTAGNVAHQSEKFGDEDDMLFLNLEFEGGRFAVLEWGSAFRWGEHYV
HHHHHCCCCCEEEEECCCHHHHHHHCCCCCCEEEEEEEECCCEEEEEECCCCCCCCCEEE
LIQGEKGAIKLDMYHCKGTLRVDGKDSHFLIHETQEEDDDRTRIYTSTEMDGAIQYGKPG
EEECCCCEEEEEEEECCEEEEECCCCCEEEEECCCCCCCCCEEEEEECCCCCCEECCCCC
KRTPMWLSSIMKKEMKYLNDILHGMKPTEEFEKLLTGEAARAAIATADACTKSRYENRKV
CCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCE
EVAEITG
EEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11463916; 8759848 [H]