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The map label for this gene is yigB [H]

Identifier: 15603565

GI number: 15603565

Start: 1906814

End: 1907524

Strand: Reverse

Name: yigB [H]

Synonym: PM1700

Alternate gene names: 15603565

Gene position: 1907524-1906814 (Counterclockwise)

Preceding gene: 15603566

Following gene: 15603564

Centisome position: 84.5

GC content: 43.18

Gene sequence:

>711_bases
ATGAAATTCTACCGCACTTTACGCCCTTTCAAATTAATCAGTTTTGATTTGGACGACACCCTGTACGATAACAGCGACGT
GATTCGCCTCGCGGAAGAAAATTTTATTGAAAAAGTCAAACTTGAAAGCCAGTTAAATATCTCATCAGAAGAATGGCGAG
CCTGGAAGCAACGTATCGAACAACGTCATCCTATGTTGTGTGAAGATGTGGTTGCTTGGCGGATTGAAACCTTGCACCAA
CTCTTAGCAAATTATCAGAAAAGTGCGGCAGAGATTGAGCGAGTTTGTCAGCAAGCGATGGCGTTATTTGTGGAATGGCG
TCATAAAATTGATGTGCCGGTGCAAAGTCAACAGGTGTTGAATTTACTAAAACAAAAATATCCACTGGTGGCGATTACTA
ACGGTAATGTTGAGCCACAACGTATAGGTTTATCACAATTTGATCTCGTACTACGGGGCGGTGAACAGGGCAGAGCGAAA
CCCCATCAAGATTTATTCCATCAAACCGCACAACACTTTGGCGTTCAGCCGCACGAGATTTTACACGTCGGTGATAATTT
AATGACAGACGTACAAGGCGCGATTCAGGCTGATTGTCAGGCGGTTTGGATTAATCTTTCAGGCAAAGTGCTACGGGATT
TCCCAGAAGCAAGATTAATGCCAACCTTAGAAATTACCGAGTTGAAACAGTTGTTAATGTTGGTGGCGTAA

Upstream 100 bases:

>100_bases
ATCCACCACTCAAATTTATACCCATTTAAATTTTCAACATCTTGCGGAGGTGTATGATTCAGCACATCCGCGTGCGAAAC
GCAAAAAATAGGAAAATTGT

Downstream 100 bases:

>100_bases
ACATCGTAGTGAGGGAAGAAATATGCAACAACAACGAGAAGCCACGATAGCCTTATGGTTTGAGATGTGGCTGCAACAAC
AAGATTTAGGTATTGATCGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 236; Mature: 236

Protein sequence:

>236_residues
MKFYRTLRPFKLISFDLDDTLYDNSDVIRLAEENFIEKVKLESQLNISSEEWRAWKQRIEQRHPMLCEDVVAWRIETLHQ
LLANYQKSAAEIERVCQQAMALFVEWRHKIDVPVQSQQVLNLLKQKYPLVAITNGNVEPQRIGLSQFDLVLRGGEQGRAK
PHQDLFHQTAQHFGVQPHEILHVGDNLMTDVQGAIQADCQAVWINLSGKVLRDFPEARLMPTLEITELKQLLMLVA

Sequences:

>Translated_236_residues
MKFYRTLRPFKLISFDLDDTLYDNSDVIRLAEENFIEKVKLESQLNISSEEWRAWKQRIEQRHPMLCEDVVAWRIETLHQ
LLANYQKSAAEIERVCQQAMALFVEWRHKIDVPVQSQQVLNLLKQKYPLVAITNGNVEPQRIGLSQFDLVLRGGEQGRAK
PHQDLFHQTAQHFGVQPHEILHVGDNLMTDVQGAIQADCQAVWINLSGKVLRDFPEARLMPTLEITELKQLLMLVA
>Mature_236_residues
MKFYRTLRPFKLISFDLDDTLYDNSDVIRLAEENFIEKVKLESQLNISSEEWRAWKQRIEQRHPMLCEDVVAWRIETLHQ
LLANYQKSAAEIERVCQQAMALFVEWRHKIDVPVQSQQVLNLLKQKYPLVAITNGNVEPQRIGLSQFDLVLRGGEQGRAK
PHQDLFHQTAQHFGVQPHEILHVGDNLMTDVQGAIQADCQAVWINLSGKVLRDFPEARLMPTLEITELKQLLMLVA

Specific function: Unknown

COG id: COG1011

COG function: function code R; Predicted hydrolase (HAD superfamily)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli yjjG [H]

Homologues:

Organism=Homo sapiens, GI23308749, Length=239, Percent_Identity=28.0334728033473, Blast_Score=72, Evalue=3e-13,
Organism=Escherichia coli, GI2367295, Length=238, Percent_Identity=39.9159663865546, Blast_Score=172, Evalue=2e-44,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005834
- InterPro:   IPR023214
- InterPro:   IPR006439 [H]

Pfam domain/function: PF00702 Hydrolase [H]

EC number: NA

Molecular weight: Translated: 27392; Mature: 27392

Theoretical pI: Translated: 6.31; Mature: 6.31

Prosite motif: PS00142 ZINC_PROTEASE ; PS00761 SPASE_I_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFYRTLRPFKLISFDLDDTLYDNSDVIRLAEENFIEKVKLESQLNISSEEWRAWKQRIE
CCCHHHCCCCEEEEECCCCHHCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
QRHPMLCEDVVAWRIETLHQLLANYQKSAAEIERVCQQAMALFVEWRHKIDVPVQSQQVL
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH
NLLKQKYPLVAITNGNVEPQRIGLSQFDLVLRGGEQGRAKPHQDLFHQTAQHFGVQPHEI
HHHHHCCCEEEEECCCCCHHHCCHHHHHHHEECCCCCCCCCHHHHHHHHHHHHCCCHHHH
LHVGDNLMTDVQGAIQADCQAVWINLSGKVLRDFPEARLMPTLEITELKQLLMLVA
HHHCCHHHHHHHHHHHCCCEEEEEECCCHHHHHCCHHHCCCCCCHHHHHHHHHHCC
>Mature Secondary Structure
MKFYRTLRPFKLISFDLDDTLYDNSDVIRLAEENFIEKVKLESQLNISSEEWRAWKQRIE
CCCHHHCCCCEEEEECCCCHHCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
QRHPMLCEDVVAWRIETLHQLLANYQKSAAEIERVCQQAMALFVEWRHKIDVPVQSQQVL
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH
NLLKQKYPLVAITNGNVEPQRIGLSQFDLVLRGGEQGRAKPHQDLFHQTAQHFGVQPHEI
HHHHHCCCEEEEECCCCCHHHCCHHHHHHHEECCCCCCCCCHHHHHHHHHHHHCCCHHHH
LHVGDNLMTDVQGAIQADCQAVWINLSGKVLRDFPEARLMPTLEITELKQLLMLVA
HHHCCHHHHHHHHHHHCCCEEEEEECCCHHHHHCCHHHCCCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2254268; 1379743; 9278503; 6379604; 6324092 [H]