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The map label for this gene is yiaN [C]

Identifier: 15603392

GI number: 15603392

Start: 1726011

End: 1727339

Strand: Direct

Name: yiaN [C]

Synonym: PM1527

Alternate gene names: 15603392

Gene position: 1726011-1727339 (Clockwise)

Preceding gene: 15603391

Following gene: 15603393

Centisome position: 76.46

GC content: 44.24

Gene sequence:

>1329_bases
ATGATGAGTGGCTTAGAAATGGGTATTGTGGGTTTTTTTATCTTACTGACCCTCTTATTAATTCGAATTCATATTAGTAT
CGCGATGTTTTTAGCGGCAGCCGGGTTGTACGCCTATTTAGGTCAAGGGGATCTGAATGCCCTGATGTACACCTTAAACG
GGTTAGCCTATGCACGTTTGTCTAATTACGACTTAGCGGTTGTTCCTTTATTTATCTTTATGGGACAACTTGCTTCACAT
GGTGGGATGTCGAAAGCCTTATTCCAAGCAGCGAGTAGCTTTATTGGTCACTGGCGAGGTGGTCTCGCTATGGCTTCTGT
TGGCAGTTGTGCCGCATTTGGGGCGATTTGTGGTTCATCTTTAGCTACCGCAGCAACCATGGGACAAGTTGCTATTCCCG
AATTGAAAAAACGCCGTTATTCCGGTGAATTAAGTACAGCAACCTTAGCTGCGGGCGGCACACTCGGGATTTTAATTCCA
CCTTCCGTACCGCTTATTATTTATGCGGTACTAACACAAGAATCCATTGGGAAACTGTTCGTGGCGGCGATTATCCCGGG
AATTTTAGCGCTGTTAGGCTATGTGTTTGTGATCAAGGTGTTAGTCAGTTTACACCCTGAGGCTGGTCCAACGTCGGAAA
AAGTCCCCTTTTTACAAGCCTTAAAATCACAAGTCAAAGTATTACCAATTTTCATCGTGTTTGCGGTGGTGATTATCAGT
ATTTATGGTGGCTGGGCAAATCCAACTGAAGCCGCCTCTATTGGCGCTGCCTCTTGTGGCATTATTTCTTGGCTTTCGGG
TGGGTTAACTTGGAAAGGGTTAGTTGACAGTATCTTACAGACCGCCATGGCAAGTGCGATGATTTTTATGGTGTTGATCG
GTGCGGATTTATTGAACTCTGCGTTAGCCCTTACTCAGATGCCAGCCCAATTGGCAAATTGGGTGGTTGAACAGCAATAT
GCGCCGTTGTTGGTGTTGTTTTGTATCTTAATGATCTATTTGGTTTTAGGTTGTGTCATGGACTCCCTTGCCATGATCTT
GTTAACCATTCCGATTTTTTATCCGATTATTCTCGGTTTAGATTTCTGGGGGCTGTCAGCACAAGATAAAACCATTTGGT
TTGGCATTGTGGCATTGATGGTGGTGGAAATTGGCTTAATCACCCCACCCGTCGGCATGAACTTATTTATTATCAATAAG
ATGGATAAAGACACCCCATTATTAGCCACATCAAAATGGGTGTTGCCATTTATTGCCTCTGATCTTATTCGTATTGCTGT
GATTGCCTGCGTTCCGGGCATTGCGCTGTGGCTCGTCCATTTATTTTAA

Upstream 100 bases:

>100_bases
ACATGGATACCCAATGCCGCCATCATGTTGGGTTTTATTGTGATGGGATTGTGTGCTTTTTTCCATTTTTATATCCATTT
AACTTCAAAGGATTAAGCTT

Downstream 100 bases:

>100_bases
GTGAGGAAATTATGTCTGTCTCTCTAGCTAAACAGATTACCCAACTCAATACTGCGCATAAACCTACGGTGTTTGTCATT
GCGTTGAACTCAACCCAATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 442; Mature: 442

Protein sequence:

>442_residues
MMSGLEMGIVGFFILLTLLLIRIHISIAMFLAAAGLYAYLGQGDLNALMYTLNGLAYARLSNYDLAVVPLFIFMGQLASH
GGMSKALFQAASSFIGHWRGGLAMASVGSCAAFGAICGSSLATAATMGQVAIPELKKRRYSGELSTATLAAGGTLGILIP
PSVPLIIYAVLTQESIGKLFVAAIIPGILALLGYVFVIKVLVSLHPEAGPTSEKVPFLQALKSQVKVLPIFIVFAVVIIS
IYGGWANPTEAASIGAASCGIISWLSGGLTWKGLVDSILQTAMASAMIFMVLIGADLLNSALALTQMPAQLANWVVEQQY
APLLVLFCILMIYLVLGCVMDSLAMILLTIPIFYPIILGLDFWGLSAQDKTIWFGIVALMVVEIGLITPPVGMNLFIINK
MDKDTPLLATSKWVLPFIASDLIRIAVIACVPGIALWLVHLF

Sequences:

>Translated_442_residues
MMSGLEMGIVGFFILLTLLLIRIHISIAMFLAAAGLYAYLGQGDLNALMYTLNGLAYARLSNYDLAVVPLFIFMGQLASH
GGMSKALFQAASSFIGHWRGGLAMASVGSCAAFGAICGSSLATAATMGQVAIPELKKRRYSGELSTATLAAGGTLGILIP
PSVPLIIYAVLTQESIGKLFVAAIIPGILALLGYVFVIKVLVSLHPEAGPTSEKVPFLQALKSQVKVLPIFIVFAVVIIS
IYGGWANPTEAASIGAASCGIISWLSGGLTWKGLVDSILQTAMASAMIFMVLIGADLLNSALALTQMPAQLANWVVEQQY
APLLVLFCILMIYLVLGCVMDSLAMILLTIPIFYPIILGLDFWGLSAQDKTIWFGIVALMVVEIGLITPPVGMNLFIINK
MDKDTPLLATSKWVLPFIASDLIRIAVIACVPGIALWLVHLF
>Mature_442_residues
MMSGLEMGIVGFFILLTLLLIRIHISIAMFLAAAGLYAYLGQGDLNALMYTLNGLAYARLSNYDLAVVPLFIFMGQLASH
GGMSKALFQAASSFIGHWRGGLAMASVGSCAAFGAICGSSLATAATMGQVAIPELKKRRYSGELSTATLAAGGTLGILIP
PSVPLIIYAVLTQESIGKLFVAAIIPGILALLGYVFVIKVLVSLHPEAGPTSEKVPFLQALKSQVKVLPIFIVFAVVIIS
IYGGWANPTEAASIGAASCGIISWLSGGLTWKGLVDSILQTAMASAMIFMVLIGADLLNSALALTQMPAQLANWVVEQQY
APLLVLFCILMIYLVLGCVMDSLAMILLTIPIFYPIILGLDFWGLSAQDKTIWFGIVALMVVEIGLITPPVGMNLFIINK
MDKDTPLLATSKWVLPFIASDLIRIAVIACVPGIALWLVHLF

Specific function: Unknown

COG id: COG1593

COG function: function code G; TRAP-type C4-dicarboxylate transport system, large permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TRAP transporter large permease family [H]

Homologues:

Organism=Escherichia coli, GI48994950, Length=398, Percent_Identity=26.1306532663317, Blast_Score=94, Evalue=2e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010656
- InterPro:   IPR004681 [H]

Pfam domain/function: PF06808 DctM [H]

EC number: NA

Molecular weight: Translated: 46928; Mature: 46928

Theoretical pI: Translated: 7.42; Mature: 7.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMSGLEMGIVGFFILLTLLLIRIHISIAMFLAAAGLYAYLGQGDLNALMYTLNGLAYARL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
SNYDLAVVPLFIFMGQLASHGGMSKALFQAASSFIGHWRGGLAMASVGSCAAFGAICGSS
CCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
LATAATMGQVAIPELKKRRYSGELSTATLAAGGTLGILIPPSVPLIIYAVLTQESIGKLF
HHHHHHHCCHHHHHHHHHHCCCCCCHHEEECCCEEEEEECCCHHHHHHHHHHHHHHHHHH
VAAIIPGILALLGYVFVIKVLVSLHPEAGPTSEKVPFLQALKSQVKVLPIFIVFAVVIIS
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
IYGGWANPTEAASIGAASCGIISWLSGGLTWKGLVDSILQTAMASAMIFMVLIGADLLNS
HHCCCCCCCHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALALTQMPAQLANWVVEQQYAPLLVLFCILMIYLVLGCVMDSLAMILLTIPIFYPIILGL
HHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DFWGLSAQDKTIWFGIVALMVVEIGLITPPVGMNLFIINKMDKDTPLLATSKWVLPFIAS
HCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCEECCHHHHHHHHH
DLIRIAVIACVPGIALWLVHLF
HHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure
MMSGLEMGIVGFFILLTLLLIRIHISIAMFLAAAGLYAYLGQGDLNALMYTLNGLAYARL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
SNYDLAVVPLFIFMGQLASHGGMSKALFQAASSFIGHWRGGLAMASVGSCAAFGAICGSS
CCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
LATAATMGQVAIPELKKRRYSGELSTATLAAGGTLGILIPPSVPLIIYAVLTQESIGKLF
HHHHHHHCCHHHHHHHHHHCCCCCCHHEEECCCEEEEEECCCHHHHHHHHHHHHHHHHHH
VAAIIPGILALLGYVFVIKVLVSLHPEAGPTSEKVPFLQALKSQVKVLPIFIVFAVVIIS
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
IYGGWANPTEAASIGAASCGIISWLSGGLTWKGLVDSILQTAMASAMIFMVLIGADLLNS
HHCCCCCCCHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALALTQMPAQLANWVVEQQYAPLLVLFCILMIYLVLGCVMDSLAMILLTIPIFYPIILGL
HHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DFWGLSAQDKTIWFGIVALMVVEIGLITPPVGMNLFIINKMDKDTPLLATSKWVLPFIAS
HCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCEECCHHHHHHHHH
DLIRIAVIACVPGIALWLVHLF
HHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]