Click here to switch to the map view.

The map label for this gene is yibQ [C]

Identifier: 15603373

GI number: 15603373

Start: 1706579

End: 1707421

Strand: Direct

Name: yibQ [C]

Synonym: PM1508

Alternate gene names: 15603373

Gene position: 1706579-1707421 (Clockwise)

Preceding gene: 15603372

Following gene: 15603374

Centisome position: 75.6

GC content: 46.5

Gene sequence:

>843_bases
ATGAAAACAATTGGCGTCAAAAGGGTGAAAAGTGCGCTACTTTTTGGGGGATTTTGGATCAGCATGGCGTTGGCACAGCC
TGCCAAGTTAGCCATTGTGATCGATGATATTGGGTATCACCAGAAAGAAGACGCACAAATTTATGCGCTACCAAAAGAAA
TTTCGGTGGCGATTATCCCGTCTGCTCCACATGCTCGCCAACGTAATGAACAAGCCTATCAACAAGGTCGTGATATTTTA
ATCCATATGCCCATGCAACCGTTAAGTCATCAGCGCATTGAAGCGGGAGGATTACATGTTGGCATGCGCCAAGAGGACGT
ACAACAACGTGTGCAAACTGCCAAGGCGATTGTGTCTCATGCCATTGGCATGAATAATCACATGGGCAGTGCCGCGACTG
CTGACGCGGAGTTAATGCATAAATTAATGCAAGAACTGAAAGTGCAAGATTTGTTCTTTCTTGATAGCCGCACCATTGGA
CGCAGTGTGGCAGGCAAAATAGCCAAAGAGTACGGGGTACAAAGCCTCGATCGCCACATTTTTTTGGATGACAAAGACAC
TTATGCGGATGTTGAACGTCAATTTCAACGTGCAGTGCATTATGCACAAAAGCACGGTACGGCAATCGCGATTGGTCATC
CACGTAAAAATACAGTAGCCGTGTTACAAGCCGGATTAAAACACTTACCCGATAATGTACAGCTAGTCGGCATGGGGCGT
TTGTGGCGTAGTGAAACAGAGACGGCGCCGAAACCGCTTATTTCTCTCTTTAATACAATGCCAGCACCAACATCGAACAT
GCCTTATCAGGCTGTCCCAATGTTGAGAGGCATACCGCAATAA

Upstream 100 bases:

>100_bases
AAATTGCTGAAGTTGGTAGTAGTGGTGGACAATCACAATCTTCCTTGTATTTTGAAATTCGTCGTAAAGGGGTGGCTGTG
AATCCAATAGGTTGGTTGAA

Downstream 100 bases:

>100_bases
TTTCTTATTCAGGAGACTGTATGAAACAAAAGTATCTTTTCATTGCCTCAATGGCATTAGCGGGTTGCGGGAGTATGTCA
GAAAGCAACAAGTATTGGAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 280; Mature: 280

Protein sequence:

>280_residues
MKTIGVKRVKSALLFGGFWISMALAQPAKLAIVIDDIGYHQKEDAQIYALPKEISVAIIPSAPHARQRNEQAYQQGRDIL
IHMPMQPLSHQRIEAGGLHVGMRQEDVQQRVQTAKAIVSHAIGMNNHMGSAATADAELMHKLMQELKVQDLFFLDSRTIG
RSVAGKIAKEYGVQSLDRHIFLDDKDTYADVERQFQRAVHYAQKHGTAIAIGHPRKNTVAVLQAGLKHLPDNVQLVGMGR
LWRSETETAPKPLISLFNTMPAPTSNMPYQAVPMLRGIPQ

Sequences:

>Translated_280_residues
MKTIGVKRVKSALLFGGFWISMALAQPAKLAIVIDDIGYHQKEDAQIYALPKEISVAIIPSAPHARQRNEQAYQQGRDIL
IHMPMQPLSHQRIEAGGLHVGMRQEDVQQRVQTAKAIVSHAIGMNNHMGSAATADAELMHKLMQELKVQDLFFLDSRTIG
RSVAGKIAKEYGVQSLDRHIFLDDKDTYADVERQFQRAVHYAQKHGTAIAIGHPRKNTVAVLQAGLKHLPDNVQLVGMGR
LWRSETETAPKPLISLFNTMPAPTSNMPYQAVPMLRGIPQ
>Mature_280_residues
MKTIGVKRVKSALLFGGFWISMALAQPAKLAIVIDDIGYHQKEDAQIYALPKEISVAIIPSAPHARQRNEQAYQQGRDIL
IHMPMQPLSHQRIEAGGLHVGMRQEDVQQRVQTAKAIVSHAIGMNNHMGSAATADAELMHKLMQELKVQDLFFLDSRTIG
RSVAGKIAKEYGVQSLDRHIFLDDKDTYADVERQFQRAVHYAQKHGTAIAIGHPRKNTVAVLQAGLKHLPDNVQLVGMGR
LWRSETETAPKPLISLFNTMPAPTSNMPYQAVPMLRGIPQ

Specific function: Unknown

COG id: COG2861

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli yibQ [H]

Homologues:

Organism=Escherichia coli, GI87082298, Length=251, Percent_Identity=40.6374501992032, Blast_Score=192, Evalue=1e-50,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006837
- InterPro:   IPR011330
- InterPro:   IPR002509 [H]

Pfam domain/function: PF04748 Polysacc_deac_2 [H]

EC number: NA

Molecular weight: Translated: 31131; Mature: 31131

Theoretical pI: Translated: 10.08; Mature: 10.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTIGVKRVKSALLFGGFWISMALAQPAKLAIVIDDIGYHQKEDAQIYALPKEISVAIIP
CCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCEEEEECCCCEEEEEC
SAPHARQRNEQAYQQGRDILIHMPMQPLSHQRIEAGGLHVGMRQEDVQQRVQTAKAIVSH
CCCCHHHHHHHHHHCCCCEEEECCCCCCCCCHHHCCCEEECCCHHHHHHHHHHHHHHHHH
AIGMNNHMGSAATADAELMHKLMQELKVQDLFFLDSRTIGRSVAGKIAKEYGVQSLDRHI
HHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHEECCHHHHHHHHHHHHHHHCHHHHCCEE
FLDDKDTYADVERQFQRAVHYAQKHGTAIAIGHPRKNTVAVLQAGLKHLPDNVQLVGMGR
EECCCHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHCCCCEEEEEECH
LWRSETETAPKPLISLFNTMPAPTSNMPYQAVPMLRGIPQ
HHHCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHCCCCC
>Mature Secondary Structure
MKTIGVKRVKSALLFGGFWISMALAQPAKLAIVIDDIGYHQKEDAQIYALPKEISVAIIP
CCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCEEEEECCCCEEEEEC
SAPHARQRNEQAYQQGRDILIHMPMQPLSHQRIEAGGLHVGMRQEDVQQRVQTAKAIVSH
CCCCHHHHHHHHHHCCCCEEEECCCCCCCCCHHHCCCEEECCCHHHHHHHHHHHHHHHHH
AIGMNNHMGSAATADAELMHKLMQELKVQDLFFLDSRTIGRSVAGKIAKEYGVQSLDRHI
HHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHEECCHHHHHHHHHHHHHHHCHHHHCCEE
FLDDKDTYADVERQFQRAVHYAQKHGTAIAIGHPRKNTVAVLQAGLKHLPDNVQLVGMGR
EECCCHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHCCCCEEEEEECH
LWRSETETAPKPLISLFNTMPAPTSNMPYQAVPMLRGIPQ
HHHCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800; 10675023 [H]