| Definition | Pasteurella multocida subsp. multocida str. Pm70, complete genome. |
|---|---|
| Accession | NC_002663 |
| Length | 2,257,487 |
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The map label for this gene is 15603369
Identifier: 15603369
GI number: 15603369
Start: 1700483
End: 1701106
Strand: Direct
Name: 15603369
Synonym: PM1504
Alternate gene names: NA
Gene position: 1700483-1701106 (Clockwise)
Preceding gene: 15603368
Following gene: 15603370
Centisome position: 75.33
GC content: 38.3
Gene sequence:
>624_bases ATGAATATTTATTGCTTATTATTTGATGATTACGAAACACTGGACTTAATGGGACCGATTGAGTTTTTGTTTCGACTTCC AAATGTACAACTTCATTATATTTCCAAGCAAGGTGGACTGATTAAAAGTTATCAAGGCTTTAAAACAGATACAGTTTCTA TCACCTGTTTGCCAGAAAAAAGTATATTGCTGATTCCTGGTGGGCAAGGGACACGACAACTGGTCAAAGATATGCCGTTT TTAACTTGGTTAACTCAACTTGTGGATGAGGCTGAGTTTTGTCTGAGTGTTTGTACAGGCTCCGCTTTATTGGCTGCCAC GAAACAACTTGACGGAAAATGGGCGACATCCAATAAATTCGCATTTGAGTGGGTTCGTCAGATAAATCCAGATGTGAAGT GGAAAGCTGTCGCTCGTTGGGTAAGAGATGGTAAGTTTTATAGTTCATCTGGTGTGACTGCTGGCATGGATATGACCTTA GGTTTTATTCATGATCATTACAGTCAAGGCTTAGCACAACAGATAGCGAATCAAACGGAATATATTTGGAACGCTGATCC TAATAAAGATGAATTTGCTTCATTATATGGTTATTCCGCTAAAAGTAACATGACAAAAGCATAA
Upstream 100 bases:
>100_bases GTGATTGCGGTAGGATGTGGAGAGTTGTTTGTGCCGAGTGGAGAGGGTGAACCAAGTCAAGGATGTCGTTAAGCTTGTGT ACAGTGAGGAACTCGAAAAA
Downstream 100 bases:
>100_bases CAAGTTGAAGTGATGTCAGTATATCCAAAAGTGCGGTTAAATTTTTAATCGTTTTACAGAGAGAGAACAAAAATGCCAAA ACGTACAGATATAAACACCA
Product: hypothetical protein
Products: NA
Alternate protein names: AraC Family Transcriptional Regulator; Transcriptional Regulator; ThiJ/PfpI Family Protein; ThiJ/PfpI Domain Protein; Transcriptional Regulator AraC Family; DJ-1/PfpI Family Protein; DJ-1/PfpI Family; ThiJ/PfpI; Isonitrile Hydratase; AraC Family Transcription Regulator; AraC Family Transcription Regulator Protein; AraC-Family Transcriptional Regulator; Transcriptional Regulator DarR; Transcription Regulator Protein; Transcriptional Regulator Arac Family; Twin-Arginine Translocation Pathway Signal; Transcriptional Regulator AraC Family Protein; AraC Family Regulatory Helix-Turn-Helix Protein; Cyclohexyl-Isocyanide Hydratase; Hydratase; ThiH/PfpI Family Amidotransferase; Transcriptional Regulator Protein; ADPA-Family Transcriptional Regulator; Transcription Regulator; ADPA Family Transcriptional Regulator; Intracellular Protease/Amidase; AraC Family Regulatory Protein; ThiJ/PfpI Family Transcriptional Regulator Protein; Intracellular Protease/Amidase Protein; DsbA Family ThiolDisulfide Interchange Protein; Transcription Regulator Protein Thij/Pfpi; Transcriptional Regulator ThiJ/PfpI Family Protein; Secreted Protein; ThiJ/PfpI Family Transcriptional Regulator
Number of amino acids: Translated: 207; Mature: 207
Protein sequence:
>207_residues MNIYCLLFDDYETLDLMGPIEFLFRLPNVQLHYISKQGGLIKSYQGFKTDTVSITCLPEKSILLIPGGQGTRQLVKDMPF LTWLTQLVDEAEFCLSVCTGSALLAATKQLDGKWATSNKFAFEWVRQINPDVKWKAVARWVRDGKFYSSSGVTAGMDMTL GFIHDHYSQGLAQQIANQTEYIWNADPNKDEFASLYGYSAKSNMTKA
Sequences:
>Translated_207_residues MNIYCLLFDDYETLDLMGPIEFLFRLPNVQLHYISKQGGLIKSYQGFKTDTVSITCLPEKSILLIPGGQGTRQLVKDMPF LTWLTQLVDEAEFCLSVCTGSALLAATKQLDGKWATSNKFAFEWVRQINPDVKWKAVARWVRDGKFYSSSGVTAGMDMTL GFIHDHYSQGLAQQIANQTEYIWNADPNKDEFASLYGYSAKSNMTKA >Mature_207_residues MNIYCLLFDDYETLDLMGPIEFLFRLPNVQLHYISKQGGLIKSYQGFKTDTVSITCLPEKSILLIPGGQGTRQLVKDMPF LTWLTQLVDEAEFCLSVCTGSALLAATKQLDGKWATSNKFAFEWVRQINPDVKWKAVARWVRDGKFYSSSGVTAGMDMTL GFIHDHYSQGLAQQIANQTEYIWNADPNKDEFASLYGYSAKSNMTKA
Specific function: Unknown
COG id: COG0693
COG function: function code R; Putative intracellular protease/amidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23351; Mature: 23351
Theoretical pI: Translated: 6.25; Mature: 6.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNIYCLLFDDYETLDLMGPIEFLFRLPNVQLHYISKQGGLIKSYQGFKTDTVSITCLPEK CEEEEEEECCCCHHHHHHHHHHHHHCCCCEEEEEECCCCEEECCCCCCCCEEEEEEECCC SILLIPGGQGTRQLVKDMPFLTWLTQLVDEAEFCLSVCTGSALLAATKQLDGKWATSNKF CEEEEECCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCHH AFEWVRQINPDVKWKAVARWVRDGKFYSSSGVTAGMDMTLGFIHDHYSQGLAQQIANQTE HHHHHHHCCCCCHHHHHHHHHHCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC YIWNADPNKDEFASLYGYSAKSNMTKA EEECCCCCHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MNIYCLLFDDYETLDLMGPIEFLFRLPNVQLHYISKQGGLIKSYQGFKTDTVSITCLPEK CEEEEEEECCCCHHHHHHHHHHHHHCCCCEEEEEECCCCEEECCCCCCCCEEEEEEECCC SILLIPGGQGTRQLVKDMPFLTWLTQLVDEAEFCLSVCTGSALLAATKQLDGKWATSNKF CEEEEECCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCHH AFEWVRQINPDVKWKAVARWVRDGKFYSSSGVTAGMDMTLGFIHDHYSQGLAQQIANQTE HHHHHHHCCCCCHHHHHHHHHHCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC YIWNADPNKDEFASLYGYSAKSNMTKA EEECCCCCHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA