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The map label for this gene is ydeD [C]

Identifier: 15603340

GI number: 15603340

Start: 1667671

End: 1668531

Strand: Reverse

Name: ydeD [C]

Synonym: PM1475

Alternate gene names: 15603340

Gene position: 1668531-1667671 (Counterclockwise)

Preceding gene: 15603341

Following gene: 15603339

Centisome position: 73.91

GC content: 38.21

Gene sequence:

>861_bases
ATGATATACCAAATTATTGCACTCTTTATTTGGGCAAGTTCTTTTGTTGCTGGGAAATATGCTTTTACAATGCTCGATCC
AGTATTAACCGTTCAAACTCGCTTAATGATAATTGCGTTACTTGTTTTTCCACTCTTTTTACGTCATTGGAAAAAAGTGG
ATAAGAGGTTGCGTCCACAATTATGGTGGCTCGGCTTTTTTAATTATCCTGCAGTATTTTTATTACAGTTTGTTGGACTT
CATTATACGTCCGCGGCAAGTGCTGCCACTATTATTGGTTTAGAACCTTTATTGATTGTTTTTGTGGGGCATTTTTTCTT
TAAAGATAAAGCCAGTTGGTATCACTGGTTATTTGGTACATTAGCATTTATTGGTGTCGCAATTTTAATTGCTGGTGGAA
GCCACGAAGGCGAAATCACCGTCCTTGGTTGTCTTTTAGTATTATTTGCAGGGATTTTATTTTCTGTTTGCTTACGTTGG
ACAAAAACCATGATTAATCAGATCACCGCCTCTGCTTATACTGCGATTTCTGTGGTGTTAGGGGCGATCACTTGTTTACC
TTTCACTGCGTTATTAACTCAAAATTGGACTGTCAATTGGAACTGGCAAGGTGTAGCAGGATTACTTTATCTGGCTATTT
TTTGCAGTTGGATTGCTTATTGGTTATGGAATAAAGGACTGAATGCCACCCATACCAACTTTACTGGGTTATTGACCGCA
CTTGAGCCTATATTTGGCGTAGGTCTAGCGATTTTATTATTAGGTGAAATGATTTCGCTTGTATCTTGGCTAGGCATTTT
TATCATCGTATCTTCTACGGTAATGGCCAGTATGATGCCAAAATTTACCGCGAAGGAATAG

Upstream 100 bases:

>100_bases
ACATGCAAATTTAGATATTTAGACAAAAAATCTGCTTTTCATTTCATCAAGTGCGGTTAAAATAAAGTTCATTTTAACCG
CACTTTTTCGTTATAAATCC

Downstream 100 bases:

>100_bases
CTAGGGTTTCTTTGTCGCTACGGAATTTATAATTTTCCGTTGATACTTTAATAAATCTTATTCTCATTTGTGTTAAACTA
TCGCACTTGATAGTTAGATA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 286; Mature: 286

Protein sequence:

>286_residues
MIYQIIALFIWASSFVAGKYAFTMLDPVLTVQTRLMIIALLVFPLFLRHWKKVDKRLRPQLWWLGFFNYPAVFLLQFVGL
HYTSAASAATIIGLEPLLIVFVGHFFFKDKASWYHWLFGTLAFIGVAILIAGGSHEGEITVLGCLLVLFAGILFSVCLRW
TKTMINQITASAYTAISVVLGAITCLPFTALLTQNWTVNWNWQGVAGLLYLAIFCSWIAYWLWNKGLNATHTNFTGLLTA
LEPIFGVGLAILLLGEMISLVSWLGIFIIVSSTVMASMMPKFTAKE

Sequences:

>Translated_286_residues
MIYQIIALFIWASSFVAGKYAFTMLDPVLTVQTRLMIIALLVFPLFLRHWKKVDKRLRPQLWWLGFFNYPAVFLLQFVGL
HYTSAASAATIIGLEPLLIVFVGHFFFKDKASWYHWLFGTLAFIGVAILIAGGSHEGEITVLGCLLVLFAGILFSVCLRW
TKTMINQITASAYTAISVVLGAITCLPFTALLTQNWTVNWNWQGVAGLLYLAIFCSWIAYWLWNKGLNATHTNFTGLLTA
LEPIFGVGLAILLLGEMISLVSWLGIFIIVSSTVMASMMPKFTAKE
>Mature_286_residues
MIYQIIALFIWASSFVAGKYAFTMLDPVLTVQTRLMIIALLVFPLFLRHWKKVDKRLRPQLWWLGFFNYPAVFLLQFVGL
HYTSAASAATIIGLEPLLIVFVGHFFFKDKASWYHWLFGTLAFIGVAILIAGGSHEGEITVLGCLLVLFAGILFSVCLRW
TKTMINQITASAYTAISVVLGAITCLPFTALLTQNWTVNWNWQGVAGLLYLAIFCSWIAYWLWNKGLNATHTNFTGLLTA
LEPIFGVGLAILLLGEMISLVSWLGIFIIVSSTVMASMMPKFTAKE

Specific function: Unknown

COG id: COG0697

COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 DUF6 domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000620 [H]

Pfam domain/function: PF00892 DUF6 [H]

EC number: NA

Molecular weight: Translated: 31991; Mature: 31991

Theoretical pI: Translated: 9.37; Mature: 9.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure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HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]