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The map label for this gene is ytfH [C]

Identifier: 15603336

GI number: 15603336

Start: 1662969

End: 1663328

Strand: Reverse

Name: ytfH [C]

Synonym: PM1471

Alternate gene names: 15603336

Gene position: 1663328-1662969 (Counterclockwise)

Preceding gene: 15603338

Following gene: 15603335

Centisome position: 73.68

GC content: 36.67

Gene sequence:

>360_bases
ATGATGAATGAAAATGAAGACAGTTATTTAATTGATACTGGGGTAGAAATTAAGGATACCAACTTTGGCTATACATTAAG
TTTGATTGGTGGGAAATGGAAAATGATGATTTTATATTGGTTATTTACGTACCCGCCAGCGATCCGTTTCAACGAATTAA
AACGCTATCTTGGTTCCATTTCCTTTAAAACACTCAGTACCACATTAAAAGAATTAGAAAAAGATGGCTTGGTCCATCGT
GAAGAATATCCTCAAATTCCACCGAAAGTAGAATATAGCTTAACTGCACGTGGACAGTCACTGATGCCCGTTTTGCGAGC
TATGTGTGAATGGGGAAGGAAACATAAAGAGACAGAATAA

Upstream 100 bases:

>100_bases
GTTATTTTTGTTATGTTACCAAACAGAATGTCATAATATATGCGATGTTTTCGCGAAACAAGTACGCACTTTTAAGTTAT
ATACTCTCCTTAAGGAAAGC

Downstream 100 bases:

>100_bases
TTTTTGTCAAAAGATGTTGATATTTTAACCATGAATGAAGGAGGAAGTGATGAAAGTGACCAGTTCAGCCATTAAAAATG
GTGCATTTGAAGACAAATAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 119; Mature: 119

Protein sequence:

>119_residues
MMNENEDSYLIDTGVEIKDTNFGYTLSLIGGKWKMMILYWLFTYPPAIRFNELKRYLGSISFKTLSTTLKELEKDGLVHR
EEYPQIPPKVEYSLTARGQSLMPVLRAMCEWGRKHKETE

Sequences:

>Translated_119_residues
MMNENEDSYLIDTGVEIKDTNFGYTLSLIGGKWKMMILYWLFTYPPAIRFNELKRYLGSISFKTLSTTLKELEKDGLVHR
EEYPQIPPKVEYSLTARGQSLMPVLRAMCEWGRKHKETE
>Mature_119_residues
MMNENEDSYLIDTGVEIKDTNFGYTLSLIGGKWKMMILYWLFTYPPAIRFNELKRYLGSISFKTLSTTLKELEKDGLVHR
EEYPQIPPKVEYSLTARGQSLMPVLRAMCEWGRKHKETE

Specific function: Unknown

COG id: COG1733

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH hxlR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI87082391, Length=87, Percent_Identity=36.7816091954023, Blast_Score=65, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002577
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01638 DUF24 [H]

EC number: NA

Molecular weight: Translated: 13958; Mature: 13958

Theoretical pI: Translated: 7.50; Mature: 7.50

Prosite motif: PS51118 HTH_HXLR ; PS00136 SUBTILASE_ASP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMNENEDSYLIDTGVEIKDTNFGYTLSLIGGKWKMMILYWLFTYPPAIRFNELKRYLGSI
CCCCCCCCEEEECCCEEEECCCCEEEEEECCCHHHHHHHHHHHCCCCCCHHHHHHHHHCC
SFKTLSTTLKELEKDGLVHREEYPQIPPKVEYSLTARGQSLMPVLRAMCEWGRKHKETE
CHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MMNENEDSYLIDTGVEIKDTNFGYTLSLIGGKWKMMILYWLFTYPPAIRFNELKRYLGSI
CCCCCCCCEEEECCCEEEECCCCEEEEEECCCHHHHHHHHHHHCCCCCCHHHHHHHHHCC
SFKTLSTTLKELEKDGLVHREEYPQIPPKVEYSLTARGQSLMPVLRAMCEWGRKHKETE
CHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10086842; 11058132 [H]