| Definition | Pasteurella multocida subsp. multocida str. Pm70, complete genome. |
|---|---|
| Accession | NC_002663 |
| Length | 2,257,487 |
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The map label for this gene is 15603322
Identifier: 15603322
GI number: 15603322
Start: 1647141
End: 1648130
Strand: Reverse
Name: 15603322
Synonym: PM1457
Alternate gene names: NA
Gene position: 1648130-1647141 (Counterclockwise)
Preceding gene: 15603328
Following gene: 15603321
Centisome position: 73.01
GC content: 40.81
Gene sequence:
>990_bases ATGAAAAAAACATTCTCTTCAGCCCTGATTGCACTCGGATTAAGTATGACAATTGCAGGTGTTGCGCATGCAAATGAAAA ACTCATTGTTTATACCTCGATGAAAGAATCGTTAATTGGTGCGTTAAAAACAAAATTTAACGAAAAGCATCCTGACATTG CGATGGATTATCAATCTGCTGGTGCAGGCAAACTCATGGCAAAAATTGCTGCAGAAAAAGAATCAGGACAAATTATGGCA GATGTCATTTGGACCAGTGAAGTACCGGATTTCTTTAAAATGAAAGCTAATGGCATGCTAGATGCGTATGTGTCGCCTGA AGTTGAGCATATTGTGAACCCGATTCCAGATTTTGATGGTTCCTTTACACCGATTCGTTTAGGTACCTTAGGTATTGCCT ATAACACGCGTTTTGTGAAAGAGCCACCGACAAGCTGGGATGATATTACGGGCGCAAAATACAAAGGGGCTTTTGGTATT GCTAACCCGGCTTTATCGGGAACGGCGTATATGAGTGTTGCCTTGTTGAAATCGACTTTTGGCTGGGAGTTTTTTGAAAA AATCAAAGCTAATAAAGGTAAAGTGGGGAAAGGATCGGGTCAAGTCGTGGATGATACTGCCTCGGGTGACTTATTAGCGT CGTTAGCGGTAGATTATATTACCAACGACAAAATCAAAAAAGGTGCGCAGCTTAAATTGGTCTATCCAAAAGAAATGTTA GTGATTCCAAGCCCTGCTGCGATTTTCAAAGGCACCAAAAACCCAGCTGCGGCTAAAAAATTCATTGATTTCTTATTGTC TGAAGAAGCACAACACATTATTGCGCATGAAGGTACGTTACCAGTGAGAAAAGGTGTTGCAACTTTAGAAGGTATGCCAA CAGTAGAAGATGCGATTAGTCGTGCTATTCCGATTGATTATCAAGCAATCTTGACGGAGAAAGAAGAGATTGTGAAGAAA TTCACCCAAATCCTCCAAGGACGTCAATAA
Upstream 100 bases:
>100_bases GTATTGTAGGTTAAATTTCATACGATAGATGAAATCAGTTTAGTGGTAACTCCCCCCTCATAATCATTCTCATACATCAC AAAATAGGAAGGATCAGATC
Downstream 100 bases:
>100_bases AACAGGAGTGCACTATGGCAACAATCACATTCGAAAAGGTCAGTAAAGCGTTTGGTTCGAATGAAGTGCTAAAAGATTTA TCTCTTGTAGTGAAAGATGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 329; Mature: 329
Protein sequence:
>329_residues MKKTFSSALIALGLSMTIAGVAHANEKLIVYTSMKESLIGALKTKFNEKHPDIAMDYQSAGAGKLMAKIAAEKESGQIMA DVIWTSEVPDFFKMKANGMLDAYVSPEVEHIVNPIPDFDGSFTPIRLGTLGIAYNTRFVKEPPTSWDDITGAKYKGAFGI ANPALSGTAYMSVALLKSTFGWEFFEKIKANKGKVGKGSGQVVDDTASGDLLASLAVDYITNDKIKKGAQLKLVYPKEML VIPSPAAIFKGTKNPAAAKKFIDFLLSEEAQHIIAHEGTLPVRKGVATLEGMPTVEDAISRAIPIDYQAILTEKEEIVKK FTQILQGRQ
Sequences:
>Translated_329_residues MKKTFSSALIALGLSMTIAGVAHANEKLIVYTSMKESLIGALKTKFNEKHPDIAMDYQSAGAGKLMAKIAAEKESGQIMA DVIWTSEVPDFFKMKANGMLDAYVSPEVEHIVNPIPDFDGSFTPIRLGTLGIAYNTRFVKEPPTSWDDITGAKYKGAFGI ANPALSGTAYMSVALLKSTFGWEFFEKIKANKGKVGKGSGQVVDDTASGDLLASLAVDYITNDKIKKGAQLKLVYPKEML VIPSPAAIFKGTKNPAAAKKFIDFLLSEEAQHIIAHEGTLPVRKGVATLEGMPTVEDAISRAIPIDYQAILTEKEEIVKK FTQILQGRQ >Mature_329_residues MKKTFSSALIALGLSMTIAGVAHANEKLIVYTSMKESLIGALKTKFNEKHPDIAMDYQSAGAGKLMAKIAAEKESGQIMA DVIWTSEVPDFFKMKANGMLDAYVSPEVEHIVNPIPDFDGSFTPIRLGTLGIAYNTRFVKEPPTSWDDITGAKYKGAFGI ANPALSGTAYMSVALLKSTFGWEFFEKIKANKGKVGKGSGQVVDDTASGDLLASLAVDYITNDKIKKGAQLKLVYPKEML VIPSPAAIFKGTKNPAAAKKFIDFLLSEEAQHIIAHEGTLPVRKGVATLEGMPTVEDAISRAIPIDYQAILTEKEEIVKK FTQILQGRQ
Specific function: Unknown
COG id: COG1840
COG function: function code P; ABC-type Fe3+ transport system, periplasmic component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006059 [H]
Pfam domain/function: PF01547 SBP_bac_1 [H]
EC number: NA
Molecular weight: Translated: 35623; Mature: 35623
Theoretical pI: Translated: 9.03; Mature: 9.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKTFSSALIALGLSMTIAGVAHANEKLIVYTSMKESLIGALKTKFNEKHPDIAMDYQSA CCCHHHHHHHHHHHHHHHHHHEECCCEEEEEECHHHHHHHHHHHHCCCCCCCEEEECCCC GAGKLMAKIAAEKESGQIMADVIWTSEVPDFFKMKANGMLDAYVSPEVEHIVNPIPDFDG CCHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHCCCEEEECCCCCHHHHHCCCCCCCC SFTPIRLGTLGIAYNTRFVKEPPTSWDDITGAKYKGAFGIANPALSGTAYMSVALLKSTF CCCEEEEEEEEEEECCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH GWEFFEKIKANKGKVGKGSGQVVDDTASGDLLASLAVDYITNDKIKKGAQLKLVYPKEML CHHHHHHHHCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHCCCHHCCCCEEEEECCCCEE VIPSPAAIFKGTKNPAAAKKFIDFLLSEEAQHIIAHEGTLPVRKGVATLEGMPTVEDAIS EECCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCHHHHCCCCCHHHHHH RAIPIDYQAILTEKEEIVKKFTQILQGRQ HCCCCCHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MKKTFSSALIALGLSMTIAGVAHANEKLIVYTSMKESLIGALKTKFNEKHPDIAMDYQSA CCCHHHHHHHHHHHHHHHHHHEECCCEEEEEECHHHHHHHHHHHHCCCCCCCEEEECCCC GAGKLMAKIAAEKESGQIMADVIWTSEVPDFFKMKANGMLDAYVSPEVEHIVNPIPDFDG CCHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHCCCEEEECCCCCHHHHHCCCCCCCC SFTPIRLGTLGIAYNTRFVKEPPTSWDDITGAKYKGAFGIANPALSGTAYMSVALLKSTF CCCEEEEEEEEEEECCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH GWEFFEKIKANKGKVGKGSGQVVDDTASGDLLASLAVDYITNDKIKKGAQLKLVYPKEML CHHHHHHHHCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHCCCHHCCCCEEEEECCCCEE VIPSPAAIFKGTKNPAAAKKFIDFLLSEEAQHIIAHEGTLPVRKGVATLEGMPTVEDAIS EECCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCHHHHCCCCCHHHHHH RAIPIDYQAILTEKEEIVKKFTQILQGRQ HCCCCCHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800; 10675023 [H]