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The map label for this gene is xynC [H]

Identifier: 15603316

GI number: 15603316

Start: 1638710

End: 1639519

Strand: Reverse

Name: xynC [H]

Synonym: PM1451

Alternate gene names: 15603316

Gene position: 1639519-1638710 (Counterclockwise)

Preceding gene: 15603317

Following gene: 15603314

Centisome position: 72.63

GC content: 38.4

Gene sequence:

>810_bases
ATGAAAAAATGGATACTCATTTCAAGTTTAAGTTTAGGGCTTTGTTATTCGGTTTCTGCGGTTGCATTTAGTGAAAAAAA
TGTGGAAGTCTATAGTCAGGCAATGAATAAAAATATTCCCGTCACGATTGTGTTACCGGAAGGTTATGCAAGCAGTAACA
AATATAGCACCATTTATACCTTACACGGTTGGTCAGGGAATAATCGTAATTACCCCGAGAAAACCGGGCTTGGCGAGTTA
GCGGATAAATACAATGTGATTTATGTGTCACCAGACGGCAATTATGACAGTTGGTATGTGGATAGCGAACTGAAAAAAGA
GTCAAAATATTATACCTTCGTGTCAAAAGAATTAGTGGATTATGTGGATAAACACTACGCGACTCACACAGATAAAACAC
AACGCGCGATTACGGGATTGAGTATGGGTGGTTTCGGTGCCTTGTATATTGGGATTAAAAATCAAGATCGCTTTGGCAAT
ATCGGCAGCATGAGTGGTGGCGTGAATATTGAACAGTATAAAAACAACTGGGGGATTAGTGCAGTCGTGAATAGCAATTG
GCAAGATTACAATATCAAAGATCTCGCTCATGGTCTCATTTTTACCAAGAGCAATATCATTTTTGACTGCGGTGTCGATG
ATTTCTTTATTGAGCCAAACCGAGCATTACACCAAAAACTATTAGATTTGAATATTCCTCATCATTACACTGAGAAACCG
GGCGGACATTCGTGGGTTTATTGGAAAGATTCTATTGCGTTACATACACATTTCTTTAGTCAGAAATTTGCACAAGCTAA
AGAGAAATAA

Upstream 100 bases:

>100_bases
GTTTGCTTTCCCATTACTGTCGGACTATATTGATGATTGAGAATGTACGCCGTATCTCATTATTGGATGTCAATTCTTTA
ATAAGTAGAGGGTCGTATTT

Downstream 100 bases:

>100_bases
GTAAGTGAAAAAAGAGGCAGATTTCTGCCTCTTTTATTTTTCGTACCAAATTTGGTTGATATAGAGTATCACCAAGCCGG
AGGGCGTCTCGACTTTAATC

Product: XynC

Products: NA

Alternate protein names: Acetylxylosidase [H]

Number of amino acids: Translated: 269; Mature: 269

Protein sequence:

>269_residues
MKKWILISSLSLGLCYSVSAVAFSEKNVEVYSQAMNKNIPVTIVLPEGYASSNKYSTIYTLHGWSGNNRNYPEKTGLGEL
ADKYNVIYVSPDGNYDSWYVDSELKKESKYYTFVSKELVDYVDKHYATHTDKTQRAITGLSMGGFGALYIGIKNQDRFGN
IGSMSGGVNIEQYKNNWGISAVVNSNWQDYNIKDLAHGLIFTKSNIIFDCGVDDFFIEPNRALHQKLLDLNIPHHYTEKP
GGHSWVYWKDSIALHTHFFSQKFAQAKEK

Sequences:

>Translated_269_residues
MKKWILISSLSLGLCYSVSAVAFSEKNVEVYSQAMNKNIPVTIVLPEGYASSNKYSTIYTLHGWSGNNRNYPEKTGLGEL
ADKYNVIYVSPDGNYDSWYVDSELKKESKYYTFVSKELVDYVDKHYATHTDKTQRAITGLSMGGFGALYIGIKNQDRFGN
IGSMSGGVNIEQYKNNWGISAVVNSNWQDYNIKDLAHGLIFTKSNIIFDCGVDDFFIEPNRALHQKLLDLNIPHHYTEKP
GGHSWVYWKDSIALHTHFFSQKFAQAKEK
>Mature_269_residues
MKKWILISSLSLGLCYSVSAVAFSEKNVEVYSQAMNKNIPVTIVLPEGYASSNKYSTIYTLHGWSGNNRNYPEKTGLGEL
ADKYNVIYVSPDGNYDSWYVDSELKKESKYYTFVSKELVDYVDKHYATHTDKTQRAITGLSMGGFGALYIGIKNQDRFGN
IGSMSGGVNIEQYKNNWGISAVVNSNWQDYNIKDLAHGLIFTKSNIIFDCGVDDFFIEPNRALHQKLLDLNIPHHYTEKP
GGHSWVYWKDSIALHTHFFSQKFAQAKEK

Specific function: Unknown

COG id: COG0627

COG function: function code R; Predicted esterase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI33413400, Length=261, Percent_Identity=24.1379310344828, Blast_Score=65, Evalue=5e-11,
Organism=Escherichia coli, GI1786551, Length=231, Percent_Identity=26.8398268398268, Blast_Score=72, Evalue=3e-14,
Organism=Caenorhabditis elegans, GI17510185, Length=192, Percent_Identity=27.6041666666667, Blast_Score=67, Evalue=8e-12,
Organism=Drosophila melanogaster, GI45551932, Length=254, Percent_Identity=24.0157480314961, Blast_Score=69, Evalue=4e-12,
Organism=Drosophila melanogaster, GI24648347, Length=250, Percent_Identity=24, Blast_Score=68, Evalue=7e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000801 [H]

Pfam domain/function: PF00756 Esterase [H]

EC number: NA

Molecular weight: Translated: 30548; Mature: 30548

Theoretical pI: Translated: 7.76; Mature: 7.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKWILISSLSLGLCYSVSAVAFSEKNVEVYSQAMNKNIPVTIVLPEGYASSNKYSTIYT
CCCEEEEECCCCCHHEEEEEEEECCCCHHHHHHHHCCCCCEEEEECCCCCCCCCCEEEEE
LHGWSGNNRNYPEKTGLGELADKYNVIYVSPDGNYDSWYVDSELKKESKYYTFVSKELVD
EECCCCCCCCCCCCCCCHHHHCCCCEEEECCCCCCCCEEECHHHHCCCCEEEHHHHHHHH
YVDKHYATHTDKTQRAITGLSMGGFGALYIGIKNQDRFGNIGSMSGGVNIEQYKNNWGIS
HHHHHHCCCCCHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCEEECCCCCEE
AVVNSNWQDYNIKDLAHGLIFTKSNIIFDCGVDDFFIEPNRALHQKLLDLNIPHHYTEKP
EEECCCCCCCCHHHHHCEEEEEECCEEEECCCCCEEECCCHHHHHHHHHCCCCCCCCCCC
GGHSWVYWKDSIALHTHFFSQKFAQAKEK
CCCEEEEEECCEEEEHHHHHHHHHHHCCC
>Mature Secondary Structure
MKKWILISSLSLGLCYSVSAVAFSEKNVEVYSQAMNKNIPVTIVLPEGYASSNKYSTIYT
CCCEEEEECCCCCHHEEEEEEEECCCCHHHHHHHHCCCCCEEEEECCCCCCCCCCEEEEE
LHGWSGNNRNYPEKTGLGELADKYNVIYVSPDGNYDSWYVDSELKKESKYYTFVSKELVD
EECCCCCCCCCCCCCCCHHHHCCCCEEEECCCCCCCCEEECHHHHCCCCEEEHHHHHHHH
YVDKHYATHTDKTQRAITGLSMGGFGALYIGIKNQDRFGNIGSMSGGVNIEQYKNNWGIS
HHHHHHCCCCCHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCEEECCCCCEE
AVVNSNWQDYNIKDLAHGLIFTKSNIIFDCGVDDFFIEPNRALHQKLLDLNIPHHYTEKP
EEECCCCCCCCHHHHHCEEEEEECCEEEECCCCCEEECCCHHHHHHHHHCCCCCCCCCCC
GGHSWVYWKDSIALHTHFFSQKFAQAKEK
CCCEEEEEECCEEEEHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2111111 [H]