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The map label for this gene is yhgF [C]

Identifier: 15603313

GI number: 15603313

Start: 1635139

End: 1637514

Strand: Reverse

Name: yhgF [C]

Synonym: PM1448

Alternate gene names: 15603313

Gene position: 1637514-1635139 (Counterclockwise)

Preceding gene: 15603314

Following gene: 15603312

Centisome position: 72.54

GC content: 46.46

Gene sequence:

>2376_bases
ATGCTAAAAGCGGGCAGCAGCTCGCTTTTCTTACTTTTATTTTCTGAGTGTTACAGTATGCTTAATCAACAAATCAGCCA
AATTATTGCCACAGAACTCACTGTTCAACCGCAACAAATTCTCGCCGCTATCCAATTAGTCGATGACGGCAACACCATTC
CGTTCATTGCACGTTATCGTAAAGAGGTAACGGGGGGGTTAGACGATACCCAATTGCGCCATTTTGAAACCCGTTTAATT
TATTTGCGTGAATTAGAAGATCGTCGCCAAACCATTTTGAAATCCATTGAAGAACAAGGCAAATTAACTGACGATCTCCG
TAACCAAATTCAACAAGTCCAAAGCAAAACCGAATTAGAAGATTTATATCTCCCCTATAAACCAAAACGCCGCACCAAAG
GACAAATTGCCATTGAAGCAGGTTTGGAACCGTTGGCGGATTTACTTTGGTCACAGCCTGAAAATGACCCAGAAACCACC
GCACTTTCCTTTGTTGATGCCGAAAAAGGCGTGGTGGATAGCAAAGCCGCATTAGACGGGGCAAAATACATTTTAATGGA
GCGTTTCGCCGAAGATGCTGCCTTACTCGCTAAAGTGCGTGCTTATTTACAACAAAGTGCGGTCATTTTTTCTAAAGTTC
TGGAAGGCAAAGAAGCAGAAGGGGCAAAATTCCAAGACTATTTTGACCACCAAGAATTACTGAAAAATGTGCCGTCACAT
CGTGCCCTGGCGATGTTCCGTGGTCGTAATGAAGGCGTTTTACAATTAGGTTTAAATGCGGATCCAGAGCAAGAAGAAGG
CGTACGCCAAAGTTATTGTGAAGAAATTATTCGTGACCATTTGGGCGTGCGTTTTAGCGGTCAACCTGCGGACAAATGGC
GTGAACAAGTAATCGCTTGGACGTGGAAAATTAAAGTCGCCTTACATTTAGAAACCGAATTAATGGCAAGTTTGCGTGAA
AAAGCGGAAGACGAAGCCATTGATGTGTTTGCTCGCAATCTGACCGCATTGTTAATGGCAGCACCGGCGGGAGCAAAAAA
TACCATGGGCTTGGACCCGGGCTTGCGTACTGGGGTGAAAGTTGCTGTTGTGGATAACACGGGGAAATTACTTGCTACCG
ACACAATTTATCCACACACTGGACAAATGGATAATGCAATGACCACCCTTTACCGTTTGATTAAAGCACATCAAGTAGAA
CTGATTGCAATCGGTAACGGCACCGCATCTCGTGAAACCGAACGCTTTGCCAAAGAGGTGATTAAAGCCATTGAGGGCAA
CAAACCACAAACAGTGGTAGTGAGCGAAGCGGGGGCGTCTGTGTATTCTGCCTCTGAATTAGCGGCGGCAGAGTTTCCTG
AACTCGATGTGTCCTTGCGTGGTGCAGTGTCCATTGCACGTCGCTTGCAAGATCCGTTAGCCGAATTAGTCAAAATCGAA
CCGAAAGCCATTGGCGTGGGGCAATATCAACATGATGTTAACCAAAGCCAATTAGCGCGCAAACTTGATGCGGTGGTGGA
AGACTGTGTGAATGCCGTGGGTGTGGATTTAAACACAGCCTCTGCGCCATTATTGGCACGTGTGGCGGGGATGACCAAAA
CCTTGGCGCAAAATATCGTGGCATACCGTGATGAAAACGGGCGTTTCGACAGCCGAGATCAACTGAAAAAAGTGCCACGT
TTAGGACCAAAAGCCTTTGAGCAATGCGCAGGCTTTATGCGAATTGCAGCAGGGAAAAACCCACTCGATGCCTCGGGCGT
ACACCCTGAAGCCTATCCCGTGGTGGAAAAAATCCTCCAAGCCACCGAGCAATCTATCCACGATTTGATGGGTAATACCA
GCGCCGTGCGTCAGCTCGATGCGAAAAAATTTATTGATGACCAATTTGGTTTACCAACGGTACAGGATATTTTCAAAGAG
CTTGAAAAACCGGGACGTGACCCACGTGGTGAATTTAAAACTGCCACCTTCATGGACGGTGTAGAAGATATCAACGACTT
GAAAGTGGGTATGATTCTAGAGGGTACCGTGACTAATGTGACCAACTTTGGTGCTTTTGTGGATATCGGTGTGCATCAAG
ATGGCTTAGTGCATATTTCCTCACTTTCTGACAAATTCGTGGAAGACCCACACCAAGTGGTGAAAACCGGCGATATCGTC
AAAGTGAAAGTGTTAGAGGTCGATGTCCCTCGTAAACGCATCGCCCTCACTATGCGTTTAGAGGAAAAGCCGGTGGATAA
AAACGTGGCGAAAACCGACCGCACTTTATCCGCCAGACCTCGCAACAATCCAGCAACCAAAGGGCGTGATCGCAACACCG
CTAACAGCGCGATGGGTAATGCTTTTGCCGATGCGTTGAAGAATTGGAAGAAATAA

Upstream 100 bases:

>100_bases
AAATGGCGCACTGTATTTGGTCAACAAAAATAACCATCAAATAGGTGCAGTCACGGATAATCAGGCACAAGCGATTGCTT
GTCAGGTCACACAATAACCT

Downstream 100 bases:

>100_bases
GGGGATTATATGGATTCAAACAAAATCACCTTCTTCACCCGCTTTGAACAGGATATTCTGGCGGGTCGTAAAACTATCAC
CATTCGTGATAAATCTGAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 791; Mature: 791

Protein sequence:

>791_residues
MLKAGSSSLFLLLFSECYSMLNQQISQIIATELTVQPQQILAAIQLVDDGNTIPFIARYRKEVTGGLDDTQLRHFETRLI
YLRELEDRRQTILKSIEEQGKLTDDLRNQIQQVQSKTELEDLYLPYKPKRRTKGQIAIEAGLEPLADLLWSQPENDPETT
ALSFVDAEKGVVDSKAALDGAKYILMERFAEDAALLAKVRAYLQQSAVIFSKVLEGKEAEGAKFQDYFDHQELLKNVPSH
RALAMFRGRNEGVLQLGLNADPEQEEGVRQSYCEEIIRDHLGVRFSGQPADKWREQVIAWTWKIKVALHLETELMASLRE
KAEDEAIDVFARNLTALLMAAPAGAKNTMGLDPGLRTGVKVAVVDNTGKLLATDTIYPHTGQMDNAMTTLYRLIKAHQVE
LIAIGNGTASRETERFAKEVIKAIEGNKPQTVVVSEAGASVYSASELAAAEFPELDVSLRGAVSIARRLQDPLAELVKIE
PKAIGVGQYQHDVNQSQLARKLDAVVEDCVNAVGVDLNTASAPLLARVAGMTKTLAQNIVAYRDENGRFDSRDQLKKVPR
LGPKAFEQCAGFMRIAAGKNPLDASGVHPEAYPVVEKILQATEQSIHDLMGNTSAVRQLDAKKFIDDQFGLPTVQDIFKE
LEKPGRDPRGEFKTATFMDGVEDINDLKVGMILEGTVTNVTNFGAFVDIGVHQDGLVHISSLSDKFVEDPHQVVKTGDIV
KVKVLEVDVPRKRIALTMRLEEKPVDKNVAKTDRTLSARPRNNPATKGRDRNTANSAMGNAFADALKNWKK

Sequences:

>Translated_791_residues
MLKAGSSSLFLLLFSECYSMLNQQISQIIATELTVQPQQILAAIQLVDDGNTIPFIARYRKEVTGGLDDTQLRHFETRLI
YLRELEDRRQTILKSIEEQGKLTDDLRNQIQQVQSKTELEDLYLPYKPKRRTKGQIAIEAGLEPLADLLWSQPENDPETT
ALSFVDAEKGVVDSKAALDGAKYILMERFAEDAALLAKVRAYLQQSAVIFSKVLEGKEAEGAKFQDYFDHQELLKNVPSH
RALAMFRGRNEGVLQLGLNADPEQEEGVRQSYCEEIIRDHLGVRFSGQPADKWREQVIAWTWKIKVALHLETELMASLRE
KAEDEAIDVFARNLTALLMAAPAGAKNTMGLDPGLRTGVKVAVVDNTGKLLATDTIYPHTGQMDNAMTTLYRLIKAHQVE
LIAIGNGTASRETERFAKEVIKAIEGNKPQTVVVSEAGASVYSASELAAAEFPELDVSLRGAVSIARRLQDPLAELVKIE
PKAIGVGQYQHDVNQSQLARKLDAVVEDCVNAVGVDLNTASAPLLARVAGMTKTLAQNIVAYRDENGRFDSRDQLKKVPR
LGPKAFEQCAGFMRIAAGKNPLDASGVHPEAYPVVEKILQATEQSIHDLMGNTSAVRQLDAKKFIDDQFGLPTVQDIFKE
LEKPGRDPRGEFKTATFMDGVEDINDLKVGMILEGTVTNVTNFGAFVDIGVHQDGLVHISSLSDKFVEDPHQVVKTGDIV
KVKVLEVDVPRKRIALTMRLEEKPVDKNVAKTDRTLSARPRNNPATKGRDRNTANSAMGNAFADALKNWKK
>Mature_791_residues
MLKAGSSSLFLLLFSECYSMLNQQISQIIATELTVQPQQILAAIQLVDDGNTIPFIARYRKEVTGGLDDTQLRHFETRLI
YLRELEDRRQTILKSIEEQGKLTDDLRNQIQQVQSKTELEDLYLPYKPKRRTKGQIAIEAGLEPLADLLWSQPENDPETT
ALSFVDAEKGVVDSKAALDGAKYILMERFAEDAALLAKVRAYLQQSAVIFSKVLEGKEAEGAKFQDYFDHQELLKNVPSH
RALAMFRGRNEGVLQLGLNADPEQEEGVRQSYCEEIIRDHLGVRFSGQPADKWREQVIAWTWKIKVALHLETELMASLRE
KAEDEAIDVFARNLTALLMAAPAGAKNTMGLDPGLRTGVKVAVVDNTGKLLATDTIYPHTGQMDNAMTTLYRLIKAHQVE
LIAIGNGTASRETERFAKEVIKAIEGNKPQTVVVSEAGASVYSASELAAAEFPELDVSLRGAVSIARRLQDPLAELVKIE
PKAIGVGQYQHDVNQSQLARKLDAVVEDCVNAVGVDLNTASAPLLARVAGMTKTLAQNIVAYRDENGRFDSRDQLKKVPR
LGPKAFEQCAGFMRIAAGKNPLDASGVHPEAYPVVEKILQATEQSIHDLMGNTSAVRQLDAKKFIDDQFGLPTVQDIFKE
LEKPGRDPRGEFKTATFMDGVEDINDLKVGMILEGTVTNVTNFGAFVDIGVHQDGLVHISSLSDKFVEDPHQVVKTGDIV
KVKVLEVDVPRKRIALTMRLEEKPVDKNVAKTDRTLSARPRNNPATKGRDRNTANSAMGNAFADALKNWKK

Specific function: Unknown

COG id: COG2183

COG function: function code K; Transcriptional accessory protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 S1 motif domain [H]

Homologues:

Organism=Homo sapiens, GI221136781, Length=794, Percent_Identity=34.3828715365239, Blast_Score=400, Evalue=1e-111,
Organism=Homo sapiens, GI27597090, Length=706, Percent_Identity=22.8045325779037, Blast_Score=103, Evalue=5e-22,
Organism=Escherichia coli, GI87082262, Length=753, Percent_Identity=73.3067729083665, Blast_Score=1121, Evalue=0.0,
Organism=Escherichia coli, GI1787140, Length=82, Percent_Identity=42.6829268292683, Blast_Score=67, Evalue=4e-12,
Organism=Caenorhabditis elegans, GI17511129, Length=707, Percent_Identity=28.7128712871287, Blast_Score=224, Evalue=1e-58,
Organism=Caenorhabditis elegans, GI17552892, Length=300, Percent_Identity=28, Blast_Score=84, Evalue=2e-16,
Organism=Drosophila melanogaster, GI62484314, Length=773, Percent_Identity=32.7296248382924, Blast_Score=384, Evalue=1e-106,
Organism=Drosophila melanogaster, GI24640080, Length=454, Percent_Identity=22.0264317180617, Blast_Score=85, Evalue=2e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003583
- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR003029
- InterPro:   IPR005227
- InterPro:   IPR006641
- InterPro:   IPR022967
- InterPro:   IPR018974
- InterPro:   IPR023097 [H]

Pfam domain/function: PF00575 S1; PF09371 Tex_N [H]

EC number: NA

Molecular weight: Translated: 87500; Mature: 87500

Theoretical pI: Translated: 5.76; Mature: 5.76

Prosite motif: PS50126 S1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKAGSSSLFLLLFSECYSMLNQQISQIIATELTVQPQQILAAIQLVDDGNTIPFIARYR
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCHHHHHHH
KEVTGGLDDTQLRHFETRLIYLRELEDRRQTILKSIEEQGKLTDDLRNQIQQVQSKTELE
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
DLYLPYKPKRRTKGQIAIEAGLEPLADLLWSQPENDPETTALSFVDAEKGVVDSKAALDG
HHCCCCCCCCCCCCCEEEECCCHHHHHHHHCCCCCCCCHHHEEEECCCCCCCCCHHHHHH
AKYILMERFAEDAALLAKVRAYLQQSAVIFSKVLEGKEAEGAKFQDYFDHQELLKNVPSH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCHHHHHHCCCCH
RALAMFRGRNEGVLQLGLNADPEQEEGVRQSYCEEIIRDHLGVRFSGQPADKWREQVIAW
HHHHHHCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCEECCCCHHHHHHHHEEE
TWKIKVALHLETELMASLREKAEDEAIDVFARNLTALLMAAPAGAKNTMGLDPGLRTGVK
EEEEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEE
VAVVDNTGKLLATDTIYPHTGQMDNAMTTLYRLIKAHQVELIAIGNGTASRETERFAKEV
EEEEECCCCEEEECCCCCCCCCCHHHHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHH
IKAIEGNKPQTVVVSEAGASVYSASELAAAEFPELDVSLRGAVSIARRLQDPLAELVKIE
HHHHCCCCCCEEEEECCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC
PKAIGVGQYQHDVNQSQLARKLDAVVEDCVNAVGVDLNTASAPLLARVAGMTKTLAQNIV
CCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH
AYRDENGRFDSRDQLKKVPRLGPKAFEQCAGFMRIAAGKNPLDASGVHPEAYPVVEKILQ
HEECCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHH
ATEQSIHDLMGNTSAVRQLDAKKFIDDQFGLPTVQDIFKELEKPGRDPRGEFKTATFMDG
HHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHH
VEDINDLKVGMILEGTVTNVTNFGAFVDIGVHQDGLVHISSLSDKFVEDPHQVVKTGDIV
HHHHHHCEEEEEEECCHHHHHHCCCEEEECCCCCCCEEEHHHHHHHHCCHHHHHHCCCEE
KVKVLEVDVPRKRIALTMRLEEKPVDKNVAKTDRTLSARPRNNPATKGRDRNTANSAMGN
EEEEEEECCCHHHEEEEEEECCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHH
AFADALKNWKK
HHHHHHHHCCC
>Mature Secondary Structure
MLKAGSSSLFLLLFSECYSMLNQQISQIIATELTVQPQQILAAIQLVDDGNTIPFIARYR
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCHHHHHHH
KEVTGGLDDTQLRHFETRLIYLRELEDRRQTILKSIEEQGKLTDDLRNQIQQVQSKTELE
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
DLYLPYKPKRRTKGQIAIEAGLEPLADLLWSQPENDPETTALSFVDAEKGVVDSKAALDG
HHCCCCCCCCCCCCCEEEECCCHHHHHHHHCCCCCCCCHHHEEEECCCCCCCCCHHHHHH
AKYILMERFAEDAALLAKVRAYLQQSAVIFSKVLEGKEAEGAKFQDYFDHQELLKNVPSH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCHHHHHHCCCCH
RALAMFRGRNEGVLQLGLNADPEQEEGVRQSYCEEIIRDHLGVRFSGQPADKWREQVIAW
HHHHHHCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCEECCCCHHHHHHHHEEE
TWKIKVALHLETELMASLREKAEDEAIDVFARNLTALLMAAPAGAKNTMGLDPGLRTGVK
EEEEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEE
VAVVDNTGKLLATDTIYPHTGQMDNAMTTLYRLIKAHQVELIAIGNGTASRETERFAKEV
EEEEECCCCEEEECCCCCCCCCCHHHHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHH
IKAIEGNKPQTVVVSEAGASVYSASELAAAEFPELDVSLRGAVSIARRLQDPLAELVKIE
HHHHCCCCCCEEEEECCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC
PKAIGVGQYQHDVNQSQLARKLDAVVEDCVNAVGVDLNTASAPLLARVAGMTKTLAQNIV
CCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH
AYRDENGRFDSRDQLKKVPRLGPKAFEQCAGFMRIAAGKNPLDASGVHPEAYPVVEKILQ
HEECCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHH
ATEQSIHDLMGNTSAVRQLDAKKFIDDQFGLPTVQDIFKELEKPGRDPRGEFKTATFMDG
HHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHH
VEDINDLKVGMILEGTVTNVTNFGAFVDIGVHQDGLVHISSLSDKFVEDPHQVVKTGDIV
HHHHHHCEEEEEEECCHHHHHHCCCEEEECCCCCCCEEEHHHHHHHHCCHHHHHHCCCEE
KVKVLEVDVPRKRIALTMRLEEKPVDKNVAKTDRTLSARPRNNPATKGRDRNTANSAMGN
EEEEEEECCCHHHEEEEEEECCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHH
AFADALKNWKK
HHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]