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The map label for this gene is oadB

Identifier: 15603288

GI number: 15603288

Start: 1606757

End: 1608061

Strand: Direct

Name: oadB

Synonym: PM1423

Alternate gene names: 15603288

Gene position: 1606757-1608061 (Clockwise)

Preceding gene: 15603287

Following gene: 15603290

Centisome position: 71.17

GC content: 45.82

Gene sequence:

>1305_bases
ATGGAAAGTATTTTGTCATTATTAAGAGGAATGGGCATCATGCATCTGGAGTTGGGTCAAGCTCTCATGATGCTAATAAG
CCTTGTCCTCTTGTGGCTTGCCATCGCCAGAAAATTTGAGCCTTTGCTCCTTCTCCCCATTGGATTTGGTGGATTATTAT
CCAACATTCCAGAAGCTGGGCTAGCGATGAGTGCCTTAGAAAGCCTACTACATCAAGGCAGTGCTGAACAAATTGCGATC
ATCGCCGCGAAACTCAATACGGTCGCGGATCCTGTTGCAATTAAAGAGGCTTTAGCCAATGCTGTCCCTTCTGTACAAAA
TCAGCTTGAGGTGATGGCGGGGGATATGGGCTACAATGCGGGAGTCTTGGCACTGTTTTATAAAGTAGCCATTGGCTACG
GCGTTGCACCACTTATCATCTTTATGGGCGTAGGAGCCATGACCGACTTTGGTCCATTGCTGGCGAATCCACGAACCTTG
TTGTTGGGAGCTGCTGCACAATTTGGTATTTTTGCGACGATTATTGGCGCCTTACTCCTCAACTGGACAGGCATTATTAG
TTTTACCCTGCCACAAGCGGCTGCTATCGGTATTATTGGTGGCGCCGACGGTCCAACAGCGATTTATCTCTCCAGTAAAT
TAGCGCCAGAGTTATTGGGTGCGATTGCTGTTGCTGCGTATTCTTACATGGCGCTCGTGCCTTTAATTCAGCCACCAATT
ATGCGTGCTCTCACCACCCAGGCAGAACGAAAAATTAAAATGGTTCAACTGCGCAATGTCAGTAATCGTGAGAAAATTTT
ATTCCCTATCGTGTTAGTCACTTTAGTCGCCTTGCTTTTACCAGATGCCGCACCTTTATTAGGGATGTTCTGTTTTGGTA
ACTTACTGCGTACCAGTGGTGTAGTAGAACGCCTCAATGATACAGCACAAAATGCTTTGATCAATATTGTGACCATTTTC
TTAGGTTTAGCCGTGGGATCTAAATTGGTCGCGGATAAATTCTTGCAACCGCAAACCTTAGGGATTTTATTGCTTGGTGT
GGTCGCCTTCTGTATTGGTACTGCCAGTGGGGTCATCATGGCGAAATTTATGAATAAAATTTGTAAACACCCAATTAACC
CACTGATTGGTGCTGCAGGGGTATCGGCTGTGCCTATGGCTGCACGTGTTGCTAATAAAGTCGGATTAGAAGAAGATCAC
CAAAACTTCTTATTGATGCATGCAATGGGACCTAACGTGGCAGGTGTGATTGGTTCTGCCATTGCCGCAGGTGTGATGTT
GAAATACGTCTCTGCGCTCATGTAA

Upstream 100 bases:

>100_bases
CGTGCAAGCCAAGCAGGTACCGTACAAAGTATTCATGTAAAAGCCGGCGATACTGTTGCCGTTGGCGATACCTTAATGAC
ATTAAGCTAACGAGGTCAAT

Downstream 100 bases:

>100_bases
AGGGCTTACTGCCGATAAAGTGCGGTATAAAAACACACTTTTCCGATAAAAAATCCTCGTTAGATATAATACTAACGAGG
ATTTTTCTTTTCATGTTACA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 434; Mature: 434

Protein sequence:

>434_residues
MESILSLLRGMGIMHLELGQALMMLISLVLLWLAIARKFEPLLLLPIGFGGLLSNIPEAGLAMSALESLLHQGSAEQIAI
IAAKLNTVADPVAIKEALANAVPSVQNQLEVMAGDMGYNAGVLALFYKVAIGYGVAPLIIFMGVGAMTDFGPLLANPRTL
LLGAAAQFGIFATIIGALLLNWTGIISFTLPQAAAIGIIGGADGPTAIYLSSKLAPELLGAIAVAAYSYMALVPLIQPPI
MRALTTQAERKIKMVQLRNVSNREKILFPIVLVTLVALLLPDAAPLLGMFCFGNLLRTSGVVERLNDTAQNALINIVTIF
LGLAVGSKLVADKFLQPQTLGILLLGVVAFCIGTASGVIMAKFMNKICKHPINPLIGAAGVSAVPMAARVANKVGLEEDH
QNFLLMHAMGPNVAGVIGSAIAAGVMLKYVSALM

Sequences:

>Translated_434_residues
MESILSLLRGMGIMHLELGQALMMLISLVLLWLAIARKFEPLLLLPIGFGGLLSNIPEAGLAMSALESLLHQGSAEQIAI
IAAKLNTVADPVAIKEALANAVPSVQNQLEVMAGDMGYNAGVLALFYKVAIGYGVAPLIIFMGVGAMTDFGPLLANPRTL
LLGAAAQFGIFATIIGALLLNWTGIISFTLPQAAAIGIIGGADGPTAIYLSSKLAPELLGAIAVAAYSYMALVPLIQPPI
MRALTTQAERKIKMVQLRNVSNREKILFPIVLVTLVALLLPDAAPLLGMFCFGNLLRTSGVVERLNDTAQNALINIVTIF
LGLAVGSKLVADKFLQPQTLGILLLGVVAFCIGTASGVIMAKFMNKICKHPINPLIGAAGVSAVPMAARVANKVGLEEDH
QNFLLMHAMGPNVAGVIGSAIAAGVMLKYVSALM
>Mature_434_residues
MESILSLLRGMGIMHLELGQALMMLISLVLLWLAIARKFEPLLLLPIGFGGLLSNIPEAGLAMSALESLLHQGSAEQIAI
IAAKLNTVADPVAIKEALANAVPSVQNQLEVMAGDMGYNAGVLALFYKVAIGYGVAPLIIFMGVGAMTDFGPLLANPRTL
LLGAAAQFGIFATIIGALLLNWTGIISFTLPQAAAIGIIGGADGPTAIYLSSKLAPELLGAIAVAAYSYMALVPLIQPPI
MRALTTQAERKIKMVQLRNVSNREKILFPIVLVTLVALLLPDAAPLLGMFCFGNLLRTSGVVERLNDTAQNALINIVTIF
LGLAVGSKLVADKFLQPQTLGILLLGVVAFCIGTASGVIMAKFMNKICKHPINPLIGAAGVSAVPMAARVANKVGLEEDH
QNFLLMHAMGPNVAGVIGSAIAAGVMLKYVSALM

Specific function: Lyase and sodium transporter

COG id: COG1883

COG function: function code C; Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gcdB/mmdB/oadB family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): OADB_PASMU (Q9CL24)

Other databases:

- EMBL:   AE004439
- RefSeq:   NP_246362.1
- GeneID:   1244770
- GenomeReviews:   AE004439_GR
- KEGG:   pmu:PM1423
- NMPDR:   fig|272843.1.peg.1424
- HOGENOM:   HBG474553
- OMA:   AAPLIIF
- ProtClustDB:   CLSK2517347
- BioCyc:   PMUL272843:PM1423-MONOMER
- BRENDA:   4.1.1.3
- InterPro:   IPR005661
- PIRSF:   PIRSF015658
- TIGRFAMs:   TIGR01109

Pfam domain/function: PF03977 OAD_beta

EC number: =4.1.1.3

Molecular weight: Translated: 45358; Mature: 45358

Theoretical pI: Translated: 8.78; Mature: 8.78

Prosite motif: PS00238 OPSIN

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xe6eaa74)-; HASH(0xe568064)-; HASH(0xeb80d6c)-; HASH(0xc3d9a5c)-; HASH(0xeb44a88)-; HASH(0xe2518c4)-; HASH(0xe62b1e0)-; HASH(0xec0b730)-; HASH(0xd9a7a38)-;

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MESILSLLRGMGIMHLELGQALMMLISLVLLWLAIARKFEPLLLLPIGFGGLLSNIPEAG
CHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHCCCCCH
LAMSALESLLHQGSAEQIAIIAAKLNTVADPVAIKEALANAVPSVQNQLEVMAGDMGYNA
HHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH
GVLALFYKVAIGYGVAPLIIFMGVGAMTDFGPLLANPRTLLLGAAAQFGIFATIIGALLL
HHHHHHHHHHHHCCHHHHHHHHHCCHHHHCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
NWTGIISFTLPQAAAIGIIGGADGPTAIYLSSKLAPELLGAIAVAAYSYMALVPLIQPPI
HHHHHHHHHCCCHHHEEEEECCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHCHHH
MRALTTQAERKIKMVQLRNVSNREKILFPIVLVTLVALLLPDAAPLLGMFCFGNLLRTSG
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
VVERLNDTAQNALINIVTIFLGLAVGSKLVADKFLQPQTLGILLLGVVAFCIGTASGVIM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
AKFMNKICKHPINPLIGAAGVSAVPMAARVANKVGLEEDHQNFLLMHAMGPNVAGVIGSA
HHHHHHHHHCCCCHHHHCCCCHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCHHHHHHHH
IAAGVMLKYVSALM
HHHHHHHHHHHHHH
>Mature Secondary Structure
MESILSLLRGMGIMHLELGQALMMLISLVLLWLAIARKFEPLLLLPIGFGGLLSNIPEAG
CHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHCCCCCH
LAMSALESLLHQGSAEQIAIIAAKLNTVADPVAIKEALANAVPSVQNQLEVMAGDMGYNA
HHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH
GVLALFYKVAIGYGVAPLIIFMGVGAMTDFGPLLANPRTLLLGAAAQFGIFATIIGALLL
HHHHHHHHHHHHCCHHHHHHHHHCCHHHHCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
NWTGIISFTLPQAAAIGIIGGADGPTAIYLSSKLAPELLGAIAVAAYSYMALVPLIQPPI
HHHHHHHHHCCCHHHEEEEECCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHCHHH
MRALTTQAERKIKMVQLRNVSNREKILFPIVLVTLVALLLPDAAPLLGMFCFGNLLRTSG
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
VVERLNDTAQNALINIVTIFLGLAVGSKLVADKFLQPQTLGILLLGVVAFCIGTASGVIM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
AKFMNKICKHPINPLIGAAGVSAVPMAARVANKVGLEEDHQNFLLMHAMGPNVAGVIGSA
HHHHHHHHHCCCCHHHHCCCCHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCHHHHHHHH
IAAGVMLKYVSALM
HHHHHHHHHHHHHH

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11248100