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The map label for this gene is xylB [H]

Identifier: 15603236

GI number: 15603236

Start: 1563119

End: 1564588

Strand: Reverse

Name: xylB [H]

Synonym: PM1371

Alternate gene names: 15603236

Gene position: 1564588-1563119 (Counterclockwise)

Preceding gene: 15603237

Following gene: 15603235

Centisome position: 69.31

GC content: 44.42

Gene sequence:

>1470_bases
ATGTATATCGGCATTGATTGTGGTACACAAGGTACTAAAGTCATCGTGGTAGATAGCCAGCAGAGACAGGTGATTGGTGT
GGGCTATGCGCCGCATGCGATCATTGAAAATAGTGAAGGTCGCCGTGAACAACAGCCTCAATGGTGGACGGACGCCTTAG
TCAGTGCATATCAACAAGCGATAAAACTCGCCCAAATCGAACCGCACTTGATTAAAGGGATTGGAGTCTCGGGGCAACAG
CATGGTTTGGTGCTGTTAGATGACAATGATCAACCGTTATACAATGCAAAACTTTGGTGTGATACCGAAACTGCGGCTGA
AAATGCGGAATTTATCCGATTGTTGGGCGGTCAAGAAAAAGCGTTCTCACAGTTAGGTATCATGCCCCAAACAGGCTATA
CCGCCTCAAAAATTTTATGGTTTAGAAAGCAGTATCCTGAACAATATCGTCGTATAGCCAAAATCATGCTCCCACATGAT
TATTTGAATTATTGGCTAACGGGACATTTTTGTATGGAATATGGTGATGCCTCAGGGACAGGTTATTTTGATGTGGTGCA
ACGTCAGTGGCATCTCGAGGCGTTTAAATTACTGGCGCCAGAATTAGACCCACATCAAGTTTTACCGCTATTACGTTCTG
CCCAACAAAAGATTGGTAAGGTACGTGCTGAAATTGCCGCCCTATTAGGCTTATCAGAAAATGTTATTGTGTCCACGGGT
GGTGGCGATAATATGATGGGGGCGATTGGGACGGGCAATATTCAGCAAGGTATTGTAACGATGAGTTTAGGCACCTCAGG
CACACTCTATGCCTATACCGATAAACCACTCACGGATTTACCGATGGAAATTGCCAACTTCTGTTCAAGTACAGACGGTT
GGTTACCGTTGGTTTGTGTGATGAACATGACCTCTGCCAATAAAAATCTGATGGATTTATTACAGATTGATGTGGCTAAA
TTTAACGAACTCATTCAACAAAGCTCAATTGGTGCAGAGGGTATCACCATTCTGCCTTTCTTCAACGGTGAGCGTGTGCC
TCCGCTACCCCAAGCGAAAGCCAGTATCTTAGGTTTAGATGCTGCTAATTTTACCCAACCGAATTTATGCCGAGCGATGA
TGGAAGCTGCCAGTTTTACTTTACGTTACGGCTTAGATTTATTCCGTCAAGCCGGCTTATCGACCTCACAAATCCGTTTA
ATTGGTGGGGGAGCGAAAAGTGCGGTATGGCGTCAAATGATTGCGGATATCATGAATACCGAAGTGGTTTGTTTGAAAGA
AGACGAAGCCGCTGCACTCGGTGGCGCAATCCAAGCCATGTGGGCGAATGGTGAAGGGGATTTAGCTGATTTATGTCACG
CCTTTGTGCATCTTGATACGACATCTCTTGTACAACCTAATCCAAAAAGTGCGGTGGAATATGAGCGAGTTTATCAGCGT
TATTTAGTACTTTTACAACAACATTATTAA

Upstream 100 bases:

>100_bases
ACTTCAATTTATTCTCCATGTCCGCAACGGGCGGTGCAGTGAGTTATGGCGAACTGCAAACGTTTATCAAACAACAGCAA
TAAGCACTGAGGAGCAAGCA

Downstream 100 bases:

>100_bases
TTGTCTCGTAAAATCAAGTAATAGGTTAAGTGATACTTCTCATTTAACCTATTTTTATTGCCTTCTTTTTATCTGTTGAA
AACAGAGTTATCCAAGGAGA

Product: hypothetical protein

Products: NA

Alternate protein names: Xylulokinase [H]

Number of amino acids: Translated: 489; Mature: 489

Protein sequence:

>489_residues
MYIGIDCGTQGTKVIVVDSQQRQVIGVGYAPHAIIENSEGRREQQPQWWTDALVSAYQQAIKLAQIEPHLIKGIGVSGQQ
HGLVLLDDNDQPLYNAKLWCDTETAAENAEFIRLLGGQEKAFSQLGIMPQTGYTASKILWFRKQYPEQYRRIAKIMLPHD
YLNYWLTGHFCMEYGDASGTGYFDVVQRQWHLEAFKLLAPELDPHQVLPLLRSAQQKIGKVRAEIAALLGLSENVIVSTG
GGDNMMGAIGTGNIQQGIVTMSLGTSGTLYAYTDKPLTDLPMEIANFCSSTDGWLPLVCVMNMTSANKNLMDLLQIDVAK
FNELIQQSSIGAEGITILPFFNGERVPPLPQAKASILGLDAANFTQPNLCRAMMEAASFTLRYGLDLFRQAGLSTSQIRL
IGGGAKSAVWRQMIADIMNTEVVCLKEDEAAALGGAIQAMWANGEGDLADLCHAFVHLDTTSLVQPNPKSAVEYERVYQR
YLVLLQQHY

Sequences:

>Translated_489_residues
MYIGIDCGTQGTKVIVVDSQQRQVIGVGYAPHAIIENSEGRREQQPQWWTDALVSAYQQAIKLAQIEPHLIKGIGVSGQQ
HGLVLLDDNDQPLYNAKLWCDTETAAENAEFIRLLGGQEKAFSQLGIMPQTGYTASKILWFRKQYPEQYRRIAKIMLPHD
YLNYWLTGHFCMEYGDASGTGYFDVVQRQWHLEAFKLLAPELDPHQVLPLLRSAQQKIGKVRAEIAALLGLSENVIVSTG
GGDNMMGAIGTGNIQQGIVTMSLGTSGTLYAYTDKPLTDLPMEIANFCSSTDGWLPLVCVMNMTSANKNLMDLLQIDVAK
FNELIQQSSIGAEGITILPFFNGERVPPLPQAKASILGLDAANFTQPNLCRAMMEAASFTLRYGLDLFRQAGLSTSQIRL
IGGGAKSAVWRQMIADIMNTEVVCLKEDEAAALGGAIQAMWANGEGDLADLCHAFVHLDTTSLVQPNPKSAVEYERVYQR
YLVLLQQHY
>Mature_489_residues
MYIGIDCGTQGTKVIVVDSQQRQVIGVGYAPHAIIENSEGRREQQPQWWTDALVSAYQQAIKLAQIEPHLIKGIGVSGQQ
HGLVLLDDNDQPLYNAKLWCDTETAAENAEFIRLLGGQEKAFSQLGIMPQTGYTASKILWFRKQYPEQYRRIAKIMLPHD
YLNYWLTGHFCMEYGDASGTGYFDVVQRQWHLEAFKLLAPELDPHQVLPLLRSAQQKIGKVRAEIAALLGLSENVIVSTG
GGDNMMGAIGTGNIQQGIVTMSLGTSGTLYAYTDKPLTDLPMEIANFCSSTDGWLPLVCVMNMTSANKNLMDLLQIDVAK
FNELIQQSSIGAEGITILPFFNGERVPPLPQAKASILGLDAANFTQPNLCRAMMEAASFTLRYGLDLFRQAGLSTSQIRL
IGGGAKSAVWRQMIADIMNTEVVCLKEDEAAALGGAIQAMWANGEGDLADLCHAFVHLDTTSLVQPNPKSAVEYERVYQR
YLVLLQQHY

Specific function: Unknown

COG id: COG1070

COG function: function code G; Sugar (pentulose and hexulose) kinases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the FGGY kinase family [H]

Homologues:

Organism=Homo sapiens, GI42794763, Length=464, Percent_Identity=24.7844827586207, Blast_Score=82, Evalue=1e-15,
Organism=Homo sapiens, GI18860918, Length=402, Percent_Identity=20.3980099502488, Blast_Score=78, Evalue=2e-14,
Organism=Escherichia coli, GI1789987, Length=499, Percent_Identity=33.0661322645291, Blast_Score=187, Evalue=1e-48,
Organism=Escherichia coli, GI1790005, Length=488, Percent_Identity=25.4098360655738, Blast_Score=111, Evalue=1e-25,
Organism=Escherichia coli, GI1787789, Length=521, Percent_Identity=23.8003838771593, Blast_Score=96, Evalue=5e-21,
Organism=Escherichia coli, GI1789168, Length=475, Percent_Identity=23.3684210526316, Blast_Score=95, Evalue=1e-20,
Organism=Caenorhabditis elegans, GI17554530, Length=477, Percent_Identity=20.125786163522, Blast_Score=92, Evalue=9e-19,
Organism=Caenorhabditis elegans, GI17535599, Length=456, Percent_Identity=24.3421052631579, Blast_Score=80, Evalue=2e-15,
Organism=Saccharomyces cerevisiae, GI6321633, Length=397, Percent_Identity=22.4181360201511, Blast_Score=76, Evalue=1e-14,
Organism=Drosophila melanogaster, GI21356607, Length=487, Percent_Identity=24.0246406570842, Blast_Score=93, Evalue=5e-19,
Organism=Drosophila melanogaster, GI19920476, Length=517, Percent_Identity=22.0502901353965, Blast_Score=74, Evalue=2e-13,
Organism=Drosophila melanogaster, GI24655555, Length=488, Percent_Identity=21.5163934426229, Blast_Score=68, Evalue=1e-11,
Organism=Drosophila melanogaster, GI24655560, Length=488, Percent_Identity=21.5163934426229, Blast_Score=68, Evalue=1e-11,
Organism=Drosophila melanogaster, GI24655570, Length=488, Percent_Identity=21.5163934426229, Blast_Score=68, Evalue=1e-11,
Organism=Drosophila melanogaster, GI24655574, Length=488, Percent_Identity=21.5163934426229, Blast_Score=68, Evalue=1e-11,
Organism=Drosophila melanogaster, GI24655565, Length=488, Percent_Identity=21.5163934426229, Blast_Score=68, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000577
- InterPro:   IPR018485
- InterPro:   IPR018483
- InterPro:   IPR018484
- InterPro:   IPR006000 [H]

Pfam domain/function: PF02782 FGGY_C; PF00370 FGGY_N [H]

EC number: =2.7.1.17 [H]

Molecular weight: Translated: 53938; Mature: 53938

Theoretical pI: Translated: 5.14; Mature: 5.14

Prosite motif: PS00933 FGGY_KINASES_1 ; PS00445 FGGY_KINASES_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYIGIDCGTQGTKVIVVDSQQRQVIGVGYAPHAIIENSEGRREQQPQWWTDALVSAYQQA
CEEEEECCCCCCEEEEEECCCCEEEEECCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHH
IKLAQIEPHLIKGIGVSGQQHGLVLLDDNDQPLYNAKLWCDTETAAENAEFIRLLGGQEK
HHHHCCCCHHHHCCCCCCCCCCEEEEECCCCCEEEEEEEECCHHHHCCHHHHHHHCCCHH
AFSQLGIMPQTGYTASKILWFRKQYPEQYRRIAKIMLPHDYLNYWLTGHFCMEYGDASGT
HHHHHCCCCCCCCCHHHHHHHHHHCHHHHHHHHHHHCCHHHHHHHHHHHHHEEECCCCCC
GYFDVVQRQWHLEAFKLLAPELDPHQVLPLLRSAQQKIGKVRAEIAALLGLSENVIVSTG
CHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECC
GGDNMMGAIGTGNIQQGIVTMSLGTSGTLYAYTDKPLTDLPMEIANFCSSTDGWLPLVCV
CCCCCEEECCCCCHHCCEEEEEECCCCEEEEECCCCCCCCCHHHHHHHCCCCCCEEEHEE
MNMTSANKNLMDLLQIDVAKFNELIQQSSIGAEGITILPFFNGERVPPLPQAKASILGLD
EECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCHHEEECC
AANFTQPNLCRAMMEAASFTLRYGLDLFRQAGLSTSQIRLIGGGAKSAVWRQMIADIMNT
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCC
EVVCLKEDEAAALGGAIQAMWANGEGDLADLCHAFVHLDTTSLVQPNPKSAVEYERVYQR
CEEEEECCCHHHHCCCEEEEEECCCCCHHHHHHHHHHCCCHHCCCCCCCHHHHHHHHHHH
YLVLLQQHY
HHHHHHCCC
>Mature Secondary Structure
MYIGIDCGTQGTKVIVVDSQQRQVIGVGYAPHAIIENSEGRREQQPQWWTDALVSAYQQA
CEEEEECCCCCCEEEEEECCCCEEEEECCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHH
IKLAQIEPHLIKGIGVSGQQHGLVLLDDNDQPLYNAKLWCDTETAAENAEFIRLLGGQEK
HHHHCCCCHHHHCCCCCCCCCCEEEEECCCCCEEEEEEEECCHHHHCCHHHHHHHCCCHH
AFSQLGIMPQTGYTASKILWFRKQYPEQYRRIAKIMLPHDYLNYWLTGHFCMEYGDASGT
HHHHHCCCCCCCCCHHHHHHHHHHCHHHHHHHHHHHCCHHHHHHHHHHHHHEEECCCCCC
GYFDVVQRQWHLEAFKLLAPELDPHQVLPLLRSAQQKIGKVRAEIAALLGLSENVIVSTG
CHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECC
GGDNMMGAIGTGNIQQGIVTMSLGTSGTLYAYTDKPLTDLPMEIANFCSSTDGWLPLVCV
CCCCCEEECCCCCHHCCEEEEEECCCCEEEEECCCCCCCCCHHHHHHHCCCCCCEEEHEE
MNMTSANKNLMDLLQIDVAKFNELIQQSSIGAEGITILPFFNGERVPPLPQAKASILGLD
EECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCHHEEECC
AANFTQPNLCRAMMEAASFTLRYGLDLFRQAGLSTSQIRLIGGGAKSAVWRQMIADIMNT
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCC
EVVCLKEDEAAALGGAIQAMWANGEGDLADLCHAFVHLDTTSLVQPNPKSAVEYERVYQR
CEEEEECCCHHHHCCCEEEEEECCCCCHHHHHHHHHHCCCHHCCCCCCCHHHHHHHHHHH
YLVLLQQHY
HHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]