| Definition | Pasteurella multocida subsp. multocida str. Pm70, complete genome. |
|---|---|
| Accession | NC_002663 |
| Length | 2,257,487 |
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The map label for this gene is 15603223
Identifier: 15603223
GI number: 15603223
Start: 1547947
End: 1549287
Strand: Reverse
Name: 15603223
Synonym: PM1358
Alternate gene names: NA
Gene position: 1549287-1547947 (Counterclockwise)
Preceding gene: 15603224
Following gene: 15603213
Centisome position: 68.63
GC content: 40.64
Gene sequence:
>1341_bases ATGTTAAGACAAATTTTGATCTTAGCTTGTGTCAGTTTTCCATTCGTCAGTATGGCAACGACACAAATACCAGATGTAGC AAAACCACCGCAAGCGATCCAAGCAACATTATTGGCTGATGTCACAGAAAAAGGGGCGAAGATTACAGGGATTGCATTGG AATATGAGGCGAATATTTTGGCGGGCACCGATCTACGTCAACTTTATCAAATTCAGACCGCACTTGAGCAAACCACGAGT GAACCAAGAACACTCTTGAAGGCTTATGTTAATAATCAACCAAGTCGAACACATCGCCCACAAGCAGGAAAATTTGTGAT CCTTGAACTCGATGAACGTGATAAAAATGCCGATTTTTATGCTTTGAAAGTGGAAAATAATCAGGCAATGAAATTTAAGG CAAAAGATAAAACGGGGCAAATGATTGAAGTCGAAAAGGTGCAGGCAAATCGTGTGCCGGAGTTTTATGGTGACAAATTA ATATACAGTATTAAACAAACCGGTTTGTTAAAGTTGACCAATGGCACAACCCTGATGCCGAGTGAAATTAAGCAACCGGC AGTGCAAGAAAAGATCAACATCGCTTATCTAGATCACTTCTCAGCGCATCGGGTTTGGCATACACAGCAAGATAATCAAC TTTTATATCGTTTTTATCAACCAGCGATCGATAGCGGGAAAAAATACCCATTAACCTTATTTTTACATGGTTCTGGACAG GTAGGAAAAGATAATTTAGCACATTTATTATCTAGTAAAGGTGCGATTGCCACATTACTTTATGAGGACGGTTTTGTTTT GGCACCTCAGTACGATGCGGTTTTTGATGCTTTCGATAAGACCGGTATCCATTGGCAAACCGACAATCGTCACCAACTCC TTTTCAAGCTGTTAGATGATGTGATTGCTAGCCACCCAAATATTGATACACAGCGGATCTATGTTATTGGGCTCTCGCGT GGGGCAGAAGGGGGATTATATTTATTACAAAAACGACCGCACTTTTTTGCGGGAGCGTTATTAATGAGTGGACGTGAGGC TAATACGCTTGAATGGATAGAGGGTAATGCATCCGTACAACATTTATCAGCATTGAAAAATACCCCAATTTGGTTTTTCC ACAGTATCGAAGATAAGGTTTCGCCGGTTGCAGGTTCGCGCATCAATTATGCGATTTTGAAAGATGAAGTGAAGTCAGAC AAGGTGAAATATACTGAATTTACGATGCAACAAGCCGGAGATAATGGCATTGTGAATAACAATCCACATAACACGTGGGA TGCGGTGTTTAACAGTCCTGAAGCGATTATGTGGTTGCTTAATCAACGTTTAACCAAATAA
Upstream 100 bases:
>100_bases CTGCTTTATGTCAATTTACAGAGTAAAAAACTCTAAGGGTTAAACAAAGATAGCAACAAGGCGAGGAAGGTTTGTTGCTA TTTTTTTAGGGAGAGAAATT
Downstream 100 bases:
>100_bases TCAGCTATGTGAAAAGGTGAGATCAACCTTGCCTTTTTATCTCTTTACTTTTTAAGTTAAGTGTTTGATAAACACAAAAG GCGTATCTTTCGATACGCCT
Product: hypothetical protein
Products: NA
Alternate protein names: Peptidase; Serine/Arginine Repetitive Matrix; Carbohydrate Esterase Family 1 Domain Protein; Phospholipase/Carboxylesterase Superfamily; Phospholipase/Carboxylesterase Family; Esterase PHB Depolymerase; Dienelactone Hydrolase; Esterase
Number of amino acids: Translated: 446; Mature: 446
Protein sequence:
>446_residues MLRQILILACVSFPFVSMATTQIPDVAKPPQAIQATLLADVTEKGAKITGIALEYEANILAGTDLRQLYQIQTALEQTTS EPRTLLKAYVNNQPSRTHRPQAGKFVILELDERDKNADFYALKVENNQAMKFKAKDKTGQMIEVEKVQANRVPEFYGDKL IYSIKQTGLLKLTNGTTLMPSEIKQPAVQEKINIAYLDHFSAHRVWHTQQDNQLLYRFYQPAIDSGKKYPLTLFLHGSGQ VGKDNLAHLLSSKGAIATLLYEDGFVLAPQYDAVFDAFDKTGIHWQTDNRHQLLFKLLDDVIASHPNIDTQRIYVIGLSR GAEGGLYLLQKRPHFFAGALLMSGREANTLEWIEGNASVQHLSALKNTPIWFFHSIEDKVSPVAGSRINYAILKDEVKSD KVKYTEFTMQQAGDNGIVNNNPHNTWDAVFNSPEAIMWLLNQRLTK
Sequences:
>Translated_446_residues MLRQILILACVSFPFVSMATTQIPDVAKPPQAIQATLLADVTEKGAKITGIALEYEANILAGTDLRQLYQIQTALEQTTS EPRTLLKAYVNNQPSRTHRPQAGKFVILELDERDKNADFYALKVENNQAMKFKAKDKTGQMIEVEKVQANRVPEFYGDKL IYSIKQTGLLKLTNGTTLMPSEIKQPAVQEKINIAYLDHFSAHRVWHTQQDNQLLYRFYQPAIDSGKKYPLTLFLHGSGQ VGKDNLAHLLSSKGAIATLLYEDGFVLAPQYDAVFDAFDKTGIHWQTDNRHQLLFKLLDDVIASHPNIDTQRIYVIGLSR GAEGGLYLLQKRPHFFAGALLMSGREANTLEWIEGNASVQHLSALKNTPIWFFHSIEDKVSPVAGSRINYAILKDEVKSD KVKYTEFTMQQAGDNGIVNNNPHNTWDAVFNSPEAIMWLLNQRLTK >Mature_446_residues MLRQILILACVSFPFVSMATTQIPDVAKPPQAIQATLLADVTEKGAKITGIALEYEANILAGTDLRQLYQIQTALEQTTS EPRTLLKAYVNNQPSRTHRPQAGKFVILELDERDKNADFYALKVENNQAMKFKAKDKTGQMIEVEKVQANRVPEFYGDKL IYSIKQTGLLKLTNGTTLMPSEIKQPAVQEKINIAYLDHFSAHRVWHTQQDNQLLYRFYQPAIDSGKKYPLTLFLHGSGQ VGKDNLAHLLSSKGAIATLLYEDGFVLAPQYDAVFDAFDKTGIHWQTDNRHQLLFKLLDDVIASHPNIDTQRIYVIGLSR GAEGGLYLLQKRPHFFAGALLMSGREANTLEWIEGNASVQHLSALKNTPIWFFHSIEDKVSPVAGSRINYAILKDEVKSD KVKYTEFTMQQAGDNGIVNNNPHNTWDAVFNSPEAIMWLLNQRLTK
Specific function: Unknown
COG id: COG4099
COG function: function code R; Predicted peptidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50231; Mature: 50231
Theoretical pI: Translated: 7.90; Mature: 7.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRQILILACVSFPFVSMATTQIPDVAKPPQAIQATLLADVTEKGAKITGIALEYEANIL CHHHHHHHHHHHCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEEEEEECCEE AGTDLRQLYQIQTALEQTTSEPRTLLKAYVNNQPSRTHRPQAGKFVILELDERDKNADFY ECCHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCCCEE ALKVENNQAMKFKAKDKTGQMIEVEKVQANRVPEFYGDKLIYSIKQTGLLKLTNGTTLMP EEEECCCCEEEEEECCCCCCEEEEEEHHHCCCCHHHCCCEEEEECCCCEEEECCCCEECH SEIKQPAVQEKINIAYLDHFSAHRVWHTQQDNQLLYRFYQPAIDSGKKYPLTLFLHGSGQ HHHCCCHHHHHCEEEEEECCCCCCEEECCCCCHHHHHHHHHHHCCCCCCEEEEEEECCCC VGKDNLAHLLSSKGAIATLLYEDGFVLAPQYDAVFDAFDKTGIHWQTDNRHQLLFKLLDD CCHHHHHHHHCCCCCEEEEEEECCEEECCCHHHHHHHHHCCCCEEECCCHHHHHHHHHHH VIASHPNIDTQRIYVIGLSRGAEGGLYLLQKRPHFFAGALLMSGREANTLEWIEGNASVQ HHHCCCCCCCCEEEEEEECCCCCCCEEEEECCCCHHHHHHHCCCCCCCCEEEECCCCHHH HLSALKNTPIWFFHSIEDKVSPVAGSRINYAILKDEVKSDKVKYTEFTMQQAGDNGIVNN HHHHHCCCCEEEEECCCHHCCCCCCCCEEEEEECCCCCCCCEEEHHHHHHHCCCCCCCCC NPHNTWDAVFNSPEAIMWLLNQRLTK CCCCCHHHHHCCHHHHHHHHHHHHCC >Mature Secondary Structure MLRQILILACVSFPFVSMATTQIPDVAKPPQAIQATLLADVTEKGAKITGIALEYEANIL CHHHHHHHHHHHCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEEEEEECCEE AGTDLRQLYQIQTALEQTTSEPRTLLKAYVNNQPSRTHRPQAGKFVILELDERDKNADFY ECCHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCCCEE ALKVENNQAMKFKAKDKTGQMIEVEKVQANRVPEFYGDKLIYSIKQTGLLKLTNGTTLMP EEEECCCCEEEEEECCCCCCEEEEEEHHHCCCCHHHCCCEEEEECCCCEEEECCCCEECH SEIKQPAVQEKINIAYLDHFSAHRVWHTQQDNQLLYRFYQPAIDSGKKYPLTLFLHGSGQ HHHCCCHHHHHCEEEEEECCCCCCEEECCCCCHHHHHHHHHHHCCCCCCEEEEEEECCCC VGKDNLAHLLSSKGAIATLLYEDGFVLAPQYDAVFDAFDKTGIHWQTDNRHQLLFKLLDD CCHHHHHHHHCCCCCEEEEEEECCEEECCCHHHHHHHHHCCCCEEECCCHHHHHHHHHHH VIASHPNIDTQRIYVIGLSRGAEGGLYLLQKRPHFFAGALLMSGREANTLEWIEGNASVQ HHHCCCCCCCCEEEEEEECCCCCCCEEEEECCCCHHHHHHHCCCCCCCCEEEECCCCHHH HLSALKNTPIWFFHSIEDKVSPVAGSRINYAILKDEVKSDKVKYTEFTMQQAGDNGIVNN HHHHHCCCCEEEEECCCHHCCCCCCCCEEEEEECCCCCCCCEEEHHHHHHHCCCCCCCCC NPHNTWDAVFNSPEAIMWLLNQRLTK CCCCCHHHHHCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA