| Definition | Pasteurella multocida subsp. multocida str. Pm70, complete genome. |
|---|---|
| Accession | NC_002663 |
| Length | 2,257,487 |
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The map label for this gene is fusA [H]
Identifier: 15603221
GI number: 15603221
Start: 1544478
End: 1546580
Strand: Direct
Name: fusA [H]
Synonym: PM1356
Alternate gene names: 15603221
Gene position: 1544478-1546580 (Clockwise)
Preceding gene: 15603220
Following gene: 15603222
Centisome position: 68.42
GC content: 42.56
Gene sequence:
>2103_bases ATGGCACGTACAACCCCTATTGAAAGATACCGTAACATTGGTATCAGTGCTCACATTGACGCAGGTAAAACAACCACTTC CGAGCGTATCCTATTCTATACAGGTGTGAGTCACAAACTTGGTGAGGTGCACGATGGTGCAGCTACTATGGACTGGATGG AGCAAGAACAAGAGCGTGGTATCACAATCACCTCTGCGGCAACAACCGCATTCTGGTCTGGTATGTCTAAACAATATCCA CAACACCGTATCAACGTGATTGATACTCCGGGACACGTTGACTTCACGATCGAAGTTGAGCGTTCAATGCGTGTACTTGA CGGTGCGGTGATGGTTTACTGTGCGGTGGGTGGTGTTCAACCACAATCAGAAACCGTATGGCGCCAAGCAAACAAATACC AAGTTCCTCGTGTTGCTTTCGTAAACAAAATGGACCGTACTGGTGCTAACTTCTTACGTGTAGTTGAACAAATTAAAACT CGCTTAGGGGGTAACTCTGTTCCTTTACAATTACCAATCGGTTCAGAAGATAATTTCAAAGGTGTTGTTGACCTTGTTAA AATGAAAGCGATTAACTGGAACGAAGCCGATCAAGGTATGACATTTACTTATGAAGAGATCCCAGCTGATATGGTTGATG CTTGTGAAGAATGGCGTCAAAATTTAGTTGAGTCAGCTGCAGAAGCGTCAGAAGAGTTAATGGAAAAATACCTTGGCGGT GAAGAATTAACAGAAGAAGAAATTAAAGCAGGTTTACGTCAACGCGTATTAGCCGGTGAAATTATTCCTGTATGCTGTGG TTCTGCCTTCAAAAATAAAGGTGTTCAAGCTATGCTTGATGCGGTAATCGACTATTTACCAGCACCAACAGATATCCCAG CGATCAAAGGGATTAATCCAGATGAAACAGAAGGTGAGCGTCATGCAAGTGATGATGAACCTTTCTCTGCACTTGCGTTT AAAATCGCAACTGACCCATTCGTAGGTAACTTAACGTTCTTCCGTGTTTATTCTGGTGTAATTAATTCAGGTGATACTGT ATTAAACTCTGTAAAAGATAAACGTGAGCGTTTTGGTCGTATCGTACAGATGCACGCAAACAAACGTGAAGAAATCAAAG AAGTACGTGCAGGCGATATCGCAGCCGCAATTGGTTTGAAAGATGTAGGTACTGGTGATACATTATGTGCACAAGATGCG CCAATTATTCTTGAGCGCATGGAATTCCCAGAGCCAGTAATTTCTGTTGCTGTTGAGCCAAAAACGAAAGCAGACCAAGA AAAAATGGGTCTTGCATTAGGTCGCTTAGCACAAGAAGACCCTTCATTCCGTGTTCATACTGATGAAGAGTCGGGTGAAA CTATTATCTCTGGTATGGGTGAGTTACACTTAGATATTATCGTTGACCGTATGCGTCGTGAATTCAAAGTTGAAGCGAAC ATTGGTAAACCACAAGTATCTTACCGTGAAACTATCCGTACTCGCGTTAATGATGTTGAAGGTAAACACGCAAAACAATC TGGTGGTCGCGGTCAATATGGTCACGTTGTTATCGACTTATATCCGTTAGATCCAGAAGGTCCGGGTTATGAATTCGTGA ACGAAATCAAAGGTGGTGTGATCCCTGGTGAATACATCCCTGCAGTAGATAAAGGTGTTCAAGAACAACTTAAATCGGGT CCATTAGCGGGTTATCCAGTAGTGGATTTAGGTGTTCGTTTACACTTCGGTTCATACCATGATGTTGACTCATCTGAGCT TGCGTTTAAATTAGCTGCATCTTTAGCCTTTAAAGCTGCATTTAATAAAGCAAACCCAGTGCTTCTTGAGCCAATCATGA AAGTAGAAGTTGAAACGCCACCGGACTACGTTGGTGATGTAATTGGTGACTTAAGCCGTCGTCGTGCGATGGTTAACGGT CAAGAAGCAAATGAATTTGTTGTGAAGATCAATGCAGAAGTACCACTTTCAGAGATGTTTGGTTATGCAACTGACCTTCG TTCACAAACTCAAGGTCGTGCTTCATACTCAATGGAACCATTGAAATATGCAGAAGCGCCGAAAAACGTTGCTGATGCAA TCATTGAAGCTCGCAAAAAATAA
Upstream 100 bases:
>100_bases TTTTTAGCAACTACGTTTTCAGGCTTCATCTCATTTAATTATGTGGTGAAGCCTTATACATATTTAAAATTTCATATTTA ATTCCAGCAAGGAAATAATA
Downstream 100 bases:
>100_bases TTTTGTTTAACAAAACCACAAGCTGTAATAGCTTGTGGTCTCTACTGAGGAAACTTAATCGTGTCTAAAGAAAAATTTGA ACGTACAAAACCGCACGTAA
Product: elongation factor G
Products: GDP; phosphate
Alternate protein names: EF-G [H]
Number of amino acids: Translated: 700; Mature: 699
Protein sequence:
>700_residues MARTTPIERYRNIGISAHIDAGKTTTSERILFYTGVSHKLGEVHDGAATMDWMEQEQERGITITSAATTAFWSGMSKQYP QHRINVIDTPGHVDFTIEVERSMRVLDGAVMVYCAVGGVQPQSETVWRQANKYQVPRVAFVNKMDRTGANFLRVVEQIKT RLGGNSVPLQLPIGSEDNFKGVVDLVKMKAINWNEADQGMTFTYEEIPADMVDACEEWRQNLVESAAEASEELMEKYLGG EELTEEEIKAGLRQRVLAGEIIPVCCGSAFKNKGVQAMLDAVIDYLPAPTDIPAIKGINPDETEGERHASDDEPFSALAF KIATDPFVGNLTFFRVYSGVINSGDTVLNSVKDKRERFGRIVQMHANKREEIKEVRAGDIAAAIGLKDVGTGDTLCAQDA PIILERMEFPEPVISVAVEPKTKADQEKMGLALGRLAQEDPSFRVHTDEESGETIISGMGELHLDIIVDRMRREFKVEAN IGKPQVSYRETIRTRVNDVEGKHAKQSGGRGQYGHVVIDLYPLDPEGPGYEFVNEIKGGVIPGEYIPAVDKGVQEQLKSG PLAGYPVVDLGVRLHFGSYHDVDSSELAFKLAASLAFKAAFNKANPVLLEPIMKVEVETPPDYVGDVIGDLSRRRAMVNG QEANEFVVKINAEVPLSEMFGYATDLRSQTQGRASYSMEPLKYAEAPKNVADAIIEARKK
Sequences:
>Translated_700_residues MARTTPIERYRNIGISAHIDAGKTTTSERILFYTGVSHKLGEVHDGAATMDWMEQEQERGITITSAATTAFWSGMSKQYP QHRINVIDTPGHVDFTIEVERSMRVLDGAVMVYCAVGGVQPQSETVWRQANKYQVPRVAFVNKMDRTGANFLRVVEQIKT RLGGNSVPLQLPIGSEDNFKGVVDLVKMKAINWNEADQGMTFTYEEIPADMVDACEEWRQNLVESAAEASEELMEKYLGG EELTEEEIKAGLRQRVLAGEIIPVCCGSAFKNKGVQAMLDAVIDYLPAPTDIPAIKGINPDETEGERHASDDEPFSALAF KIATDPFVGNLTFFRVYSGVINSGDTVLNSVKDKRERFGRIVQMHANKREEIKEVRAGDIAAAIGLKDVGTGDTLCAQDA PIILERMEFPEPVISVAVEPKTKADQEKMGLALGRLAQEDPSFRVHTDEESGETIISGMGELHLDIIVDRMRREFKVEAN IGKPQVSYRETIRTRVNDVEGKHAKQSGGRGQYGHVVIDLYPLDPEGPGYEFVNEIKGGVIPGEYIPAVDKGVQEQLKSG PLAGYPVVDLGVRLHFGSYHDVDSSELAFKLAASLAFKAAFNKANPVLLEPIMKVEVETPPDYVGDVIGDLSRRRAMVNG QEANEFVVKINAEVPLSEMFGYATDLRSQTQGRASYSMEPLKYAEAPKNVADAIIEARKK >Mature_699_residues ARTTPIERYRNIGISAHIDAGKTTTSERILFYTGVSHKLGEVHDGAATMDWMEQEQERGITITSAATTAFWSGMSKQYPQ HRINVIDTPGHVDFTIEVERSMRVLDGAVMVYCAVGGVQPQSETVWRQANKYQVPRVAFVNKMDRTGANFLRVVEQIKTR LGGNSVPLQLPIGSEDNFKGVVDLVKMKAINWNEADQGMTFTYEEIPADMVDACEEWRQNLVESAAEASEELMEKYLGGE ELTEEEIKAGLRQRVLAGEIIPVCCGSAFKNKGVQAMLDAVIDYLPAPTDIPAIKGINPDETEGERHASDDEPFSALAFK IATDPFVGNLTFFRVYSGVINSGDTVLNSVKDKRERFGRIVQMHANKREEIKEVRAGDIAAAIGLKDVGTGDTLCAQDAP IILERMEFPEPVISVAVEPKTKADQEKMGLALGRLAQEDPSFRVHTDEESGETIISGMGELHLDIIVDRMRREFKVEANI GKPQVSYRETIRTRVNDVEGKHAKQSGGRGQYGHVVIDLYPLDPEGPGYEFVNEIKGGVIPGEYIPAVDKGVQEQLKSGP LAGYPVVDLGVRLHFGSYHDVDSSELAFKLAASLAFKAAFNKANPVLLEPIMKVEVETPPDYVGDVIGDLSRRRAMVNGQ EANEFVVKINAEVPLSEMFGYATDLRSQTQGRASYSMEPLKYAEAPKNVADAIIEARKK
Specific function: Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and
COG id: COG0480
COG function: function code J; Translation elongation factors (GTPases)
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GTP-binding elongation factor family. EF-G/EF-2 subfamily [H]
Homologues:
Organism=Homo sapiens, GI18390331, Length=690, Percent_Identity=45.2173913043478, Blast_Score=579, Evalue=1e-165, Organism=Homo sapiens, GI19923640, Length=721, Percent_Identity=37.8640776699029, Blast_Score=447, Evalue=1e-125, Organism=Homo sapiens, GI25306287, Length=718, Percent_Identity=34.4011142061281, Blast_Score=369, Evalue=1e-102, Organism=Homo sapiens, GI25306283, Length=457, Percent_Identity=41.1378555798687, Blast_Score=310, Evalue=2e-84, Organism=Homo sapiens, GI4503483, Length=403, Percent_Identity=29.2803970223325, Blast_Score=106, Evalue=6e-23, Organism=Homo sapiens, GI157426893, Length=154, Percent_Identity=36.3636363636364, Blast_Score=103, Evalue=4e-22, Organism=Homo sapiens, GI94966754, Length=138, Percent_Identity=40.5797101449275, Blast_Score=98, Evalue=2e-20, Organism=Homo sapiens, GI310132016, Length=120, Percent_Identity=40, Blast_Score=83, Evalue=7e-16, Organism=Homo sapiens, GI310110807, Length=120, Percent_Identity=40, Blast_Score=83, Evalue=7e-16, Organism=Homo sapiens, GI310123363, Length=120, Percent_Identity=40, Blast_Score=83, Evalue=7e-16, Organism=Escherichia coli, GI1789738, Length=704, Percent_Identity=84.6590909090909, Blast_Score=1228, Evalue=0.0, Organism=Escherichia coli, GI1790835, Length=495, Percent_Identity=26.8686868686869, Blast_Score=160, Evalue=2e-40, Organism=Escherichia coli, GI48994988, Length=182, Percent_Identity=36.2637362637363, Blast_Score=106, Evalue=6e-24, Organism=Escherichia coli, GI1788922, Length=157, Percent_Identity=36.9426751592357, Blast_Score=93, Evalue=5e-20, Organism=Caenorhabditis elegans, GI17533571, Length=691, Percent_Identity=43.4153400868307, Blast_Score=551, Evalue=1e-157, Organism=Caenorhabditis elegans, GI17556745, Length=732, Percent_Identity=29.5081967213115, Blast_Score=308, Evalue=4e-84, Organism=Caenorhabditis elegans, GI17506493, Length=404, Percent_Identity=28.7128712871287, Blast_Score=108, Evalue=8e-24, Organism=Caenorhabditis elegans, GI17557151, Length=166, Percent_Identity=36.144578313253, Blast_Score=92, Evalue=9e-19, Organism=Caenorhabditis elegans, GI71988819, Length=147, Percent_Identity=34.6938775510204, Blast_Score=81, Evalue=2e-15, Organism=Caenorhabditis elegans, GI71988811, Length=147, Percent_Identity=34.6938775510204, Blast_Score=80, Evalue=3e-15, Organism=Saccharomyces cerevisiae, GI6323098, Length=699, Percent_Identity=44.3490701001431, Blast_Score=563, Evalue=1e-161, Organism=Saccharomyces cerevisiae, GI6322359, Length=800, Percent_Identity=31.125, Blast_Score=377, Evalue=1e-105, Organism=Saccharomyces cerevisiae, GI6324707, Length=407, Percent_Identity=28.7469287469287, Blast_Score=100, Evalue=9e-22, Organism=Saccharomyces cerevisiae, GI6320593, Length=407, Percent_Identity=28.7469287469287, Blast_Score=100, Evalue=9e-22, Organism=Saccharomyces cerevisiae, GI6323320, Length=155, Percent_Identity=35.4838709677419, Blast_Score=92, Evalue=2e-19, Organism=Saccharomyces cerevisiae, GI6324166, Length=174, Percent_Identity=33.9080459770115, Blast_Score=85, Evalue=4e-17, Organism=Drosophila melanogaster, GI24582462, Length=700, Percent_Identity=45.1428571428571, Blast_Score=594, Evalue=1e-170, Organism=Drosophila melanogaster, GI221458488, Length=740, Percent_Identity=32.7027027027027, Blast_Score=379, Evalue=1e-105, Organism=Drosophila melanogaster, GI24585711, Length=476, Percent_Identity=27.9411764705882, Blast_Score=107, Evalue=2e-23, Organism=Drosophila melanogaster, GI24585713, Length=476, Percent_Identity=27.9411764705882, Blast_Score=107, Evalue=2e-23, Organism=Drosophila melanogaster, GI24585709, Length=476, Percent_Identity=27.9411764705882, Blast_Score=107, Evalue=2e-23, Organism=Drosophila melanogaster, GI78706572, Length=158, Percent_Identity=37.9746835443038, Blast_Score=105, Evalue=9e-23, Organism=Drosophila melanogaster, GI28574573, Length=196, Percent_Identity=31.6326530612245, Blast_Score=90, Evalue=5e-18,
Paralogues:
None
Copy number: 1080 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 2520 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 20 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 7984 Molecules/Cell In: Growth Phase, Gl
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009022 - InterPro: IPR000795 - InterPro: IPR020568 - InterPro: IPR014721 - InterPro: IPR005225 - InterPro: IPR004540 - InterPro: IPR000640 - InterPro: IPR005517 - InterPro: IPR004161 - InterPro: IPR009000 [H]
Pfam domain/function: PF00679 EFG_C; PF03764 EFG_IV; PF00009 GTP_EFTU; PF03144 GTP_EFTU_D2 [H]
EC number: 3.6.5.3
Molecular weight: Translated: 77187; Mature: 77056
Theoretical pI: Translated: 4.81; Mature: 4.81
Prosite motif: PS00301 EFACTOR_GTP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARTTPIERYRNIGISAHIDAGKTTTSERILFYTGVSHKLGEVHDGAATMDWMEQEQERG CCCCCHHHHHHCCCCEEEECCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHCC ITITSAATTAFWSGMSKQYPQHRINVIDTPGHVDFTIEVERSMRVLDGAVMVYCAVGGVQ EEEEEHHHHHHHHCHHHCCCCCCCEEEECCCCEEEEEEECHHHHHHHHHHEEEEECCCCC PQSETVWRQANKYQVPRVAFVNKMDRTGANFLRVVEQIKTRLGGNSVPLQLPIGSEDNFK CCHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHH GVVDLVKMKAINWNEADQGMTFTYEEIPADMVDACEEWRQNLVESAAEASEELMEKYLGG HHHHHHHHHCCCCCCCCCCCEEEHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC EELTEEEIKAGLRQRVLAGEIIPVCCGSAFKNKGVQAMLDAVIDYLPAPTDIPAIKGINP CCCCHHHHHHHHHHHHHHCCHHHHHCCCHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCC DETEGERHASDDEPFSALAFKIATDPFVGNLTFFRVYSGVINSGDTVLNSVKDKRERFGR CCCCCCCCCCCCCCHHHHEEEEECCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH IVQMHANKREEIKEVRAGDIAAAIGLKDVGTGDTLCAQDAPIILERMEFPEPVISVAVEP HHHHHCCCHHHHHHHHHCCHHHHHCCCCCCCCCCCCCCCCCHHHHHHCCCCCHHEEEECC KTKADQEKMGLALGRLAQEDPSFRVHTDEESGETIISGMGELHLDIIVDRMRREFKVEAN CCCCCHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHCCCHHHHHHHHHHHHHHEEEECC IGKPQVSYRETIRTRVNDVEGKHAKQSGGRGQYGHVVIDLYPLDPEGPGYEFVNEIKGGV CCCCCHHHHHHHHHHHHHCCCCHHHCCCCCCCCCEEEEEEEECCCCCCCHHHHHHHCCCC IPGEYIPAVDKGVQEQLKSGPLAGYPVVDLGVRLHFGSYHDVDSSELAFKLAASLAFKAA CCCCCCCHHHHHHHHHHHCCCCCCCCCEEECEEEEECCCCCCCHHHHHHHHHHHHHHHHH FNKANPVLLEPIMKVEVETPPDYVGDVIGDLSRRRAMVNGQEANEFVVKINAEVPLSEMF HCCCCCCEECCHHEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCHHHHH GYATDLRSQTQGRASYSMEPLKYAEAPKNVADAIIEARKK HHHHHHHHHHCCCCCCCCCCHHHHCCCHHHHHHHHHHCCC >Mature Secondary Structure ARTTPIERYRNIGISAHIDAGKTTTSERILFYTGVSHKLGEVHDGAATMDWMEQEQERG CCCCHHHHHHCCCCEEEECCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHCC ITITSAATTAFWSGMSKQYPQHRINVIDTPGHVDFTIEVERSMRVLDGAVMVYCAVGGVQ EEEEEHHHHHHHHCHHHCCCCCCCEEEECCCCEEEEEEECHHHHHHHHHHEEEEECCCCC PQSETVWRQANKYQVPRVAFVNKMDRTGANFLRVVEQIKTRLGGNSVPLQLPIGSEDNFK CCHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHH GVVDLVKMKAINWNEADQGMTFTYEEIPADMVDACEEWRQNLVESAAEASEELMEKYLGG HHHHHHHHHCCCCCCCCCCCEEEHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC EELTEEEIKAGLRQRVLAGEIIPVCCGSAFKNKGVQAMLDAVIDYLPAPTDIPAIKGINP CCCCHHHHHHHHHHHHHHCCHHHHHCCCHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCC DETEGERHASDDEPFSALAFKIATDPFVGNLTFFRVYSGVINSGDTVLNSVKDKRERFGR CCCCCCCCCCCCCCHHHHEEEEECCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH IVQMHANKREEIKEVRAGDIAAAIGLKDVGTGDTLCAQDAPIILERMEFPEPVISVAVEP HHHHHCCCHHHHHHHHHCCHHHHHCCCCCCCCCCCCCCCCCHHHHHHCCCCCHHEEEECC KTKADQEKMGLALGRLAQEDPSFRVHTDEESGETIISGMGELHLDIIVDRMRREFKVEAN CCCCCHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHCCCHHHHHHHHHHHHHHEEEECC IGKPQVSYRETIRTRVNDVEGKHAKQSGGRGQYGHVVIDLYPLDPEGPGYEFVNEIKGGV CCCCCHHHHHHHHHHHHHCCCCHHHCCCCCCCCCEEEEEEEECCCCCCCHHHHHHHCCCC IPGEYIPAVDKGVQEQLKSGPLAGYPVVDLGVRLHFGSYHDVDSSELAFKLAASLAFKAA CCCCCCCHHHHHHHHHHHCCCCCCCCCEEECEEEEECCCCCCCHHHHHHHHHHHHHHHHH FNKANPVLLEPIMKVEVETPPDYVGDVIGDLSRRRAMVNGQEANEFVVKINAEVPLSEMF HCCCCCCEECCHHEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCHHHHH GYATDLRSQTQGRASYSMEPLKYAEAPKNVADAIIEARKK HHHHHHHHHHCCCCCCCCCCHHHHCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: GTP; H2O
Specific reaction: GTP + H2O = GDP + phosphate
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA