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The map label for this gene is nqrB

Identifier: 15603194

GI number: 15603194

Start: 1521750

End: 1522982

Strand: Direct

Name: nqrB

Synonym: PM1329

Alternate gene names: 15603194

Gene position: 1521750-1522982 (Clockwise)

Preceding gene: 15603193

Following gene: 15603195

Centisome position: 67.41

GC content: 44.69

Gene sequence:

>1233_bases
ATGGGTTTAAAACATTTTATTGAAAAAATTGAACCTGCGTTTTTACCGGGTGGTAAATATGAGAAATGGTATGCATTATT
TGAAGCAACCGCCACCTTCTTATATACCCCAGGTACAGTCACGCACAAAGCTTCTCACGTACGTGATGCGTTAGATTCGA
AACGCATGATGGTGTTAGTGTGGTTATCCTTATTCCCTGCGATGTTCTACGGTATGTATAACGTGGGTGCGCAAGCGATT
TTGGCGACAGACGCGTTAGGCACTCTGCAACAAGCCATTTCAGGTCATTGGCAATATGCGTTAAGTCATGCGTTAGGTGC
AGATCTGACCCTGTCAGCGGGGTGGGCAAGTAAGATGTTGTTAGGCGCAACTTACTTCTTACCGATTTACTTGACTATTT
TCTTAGTGGGTGGTTTCTGGGAAGTGCTTTTTGCGATGGTACGCAAGCATGAGATTAACGAAGGTTTCTTTGTGACCTCT
ATCCTGTTAGCTCTTATCGTTCCGCCAACTTTGCCATTATGGCAAGCTGCGTTAGCAACGACATTTGGTGTGGTTGTGGC
AAAAGAAATTTTTGGTGGTGTCGGTAAAAACTTCATGAACCCTGCATTAGCTGCGCGTGCCTTTTTATTCTTTGCTTATC
CAGCACAAATTTCAGGTGATACGGTATGGGTTGCCGCAGATGGTTTTTCTGGTGCAACCGCGCTTTCACAATGGGCTGTG
GGTGGTGAAGCTGGCTTGAAACATGTGGTAACAGGTCAACCAATCACCTGGATGGATGCCTTCATTGGTAACATTCCGGG
ATCTATCGGTGAAGTATCGACTCTAGCATTGATTATTGGTGCGGCGATTATTGTGTTTGCACGTATTGCCTCTTGGCGCA
TCATTGCGGGTGTGATGATCGGCATGATTGCCACTTCTGCCTTATTTAATCTTATTGGTTCAAGCACAAATCCATTATTT
GCAATGCCTTGGTATTGGCACTTTGTGTTAGGTGGTTTCGCATTAGGGATGTTCTTTATGGCAACAGACCCCGTTTCTGC
GGCATTCACCAACAAAGGAAAATGGTGGTACGGTATCTTAATTGGTGCGATGGCGGTATTAATCCGTGTGGTGAACCCAG
CGTATCCAGAAGGTATGATGCTGGCTATTTTATTTGCTAACTTGTTTGCGCCAGTATTCGATTATTTAGTGGTCCAAGCA
AATATCAAACGTCGGAGAGCTCGCAATGTTTAA

Upstream 100 bases:

>100_bases
AAGAAGATTTAGCCCTTTGTACCTTTGTTTGCCCTGGTAAAAATGAATATGGTCCGCTCTTACGTCAAGCTTTAGATAAG
ATCGAGAAGGAAGGTTAAAA

Downstream 100 bases:

>100_bases
GAATAAAGATAGCGTTGGCGGAACACTTCTCGTCATTATCCTTTTAAGCTTAGCTTGTTCTATTATTGTGGCAGGTTCAG
CCGTTTTGCTGAAACCAACA

Product: Na(+)-translocating NADH-quinone reductase subunit B

Products: NA

Alternate protein names: Na(+)-NQR subunit B; Na(+)-translocating NQR subunit B; NQR complex subunit B; NQR-1 subunit B

Number of amino acids: Translated: 410; Mature: 409

Protein sequence:

>410_residues
MGLKHFIEKIEPAFLPGGKYEKWYALFEATATFLYTPGTVTHKASHVRDALDSKRMMVLVWLSLFPAMFYGMYNVGAQAI
LATDALGTLQQAISGHWQYALSHALGADLTLSAGWASKMLLGATYFLPIYLTIFLVGGFWEVLFAMVRKHEINEGFFVTS
ILLALIVPPTLPLWQAALATTFGVVVAKEIFGGVGKNFMNPALAARAFLFFAYPAQISGDTVWVAADGFSGATALSQWAV
GGEAGLKHVVTGQPITWMDAFIGNIPGSIGEVSTLALIIGAAIIVFARIASWRIIAGVMIGMIATSALFNLIGSSTNPLF
AMPWYWHFVLGGFALGMFFMATDPVSAAFTNKGKWWYGILIGAMAVLIRVVNPAYPEGMMLAILFANLFAPVFDYLVVQA
NIKRRRARNV

Sequences:

>Translated_410_residues
MGLKHFIEKIEPAFLPGGKYEKWYALFEATATFLYTPGTVTHKASHVRDALDSKRMMVLVWLSLFPAMFYGMYNVGAQAI
LATDALGTLQQAISGHWQYALSHALGADLTLSAGWASKMLLGATYFLPIYLTIFLVGGFWEVLFAMVRKHEINEGFFVTS
ILLALIVPPTLPLWQAALATTFGVVVAKEIFGGVGKNFMNPALAARAFLFFAYPAQISGDTVWVAADGFSGATALSQWAV
GGEAGLKHVVTGQPITWMDAFIGNIPGSIGEVSTLALIIGAAIIVFARIASWRIIAGVMIGMIATSALFNLIGSSTNPLF
AMPWYWHFVLGGFALGMFFMATDPVSAAFTNKGKWWYGILIGAMAVLIRVVNPAYPEGMMLAILFANLFAPVFDYLVVQA
NIKRRRARNV
>Mature_409_residues
GLKHFIEKIEPAFLPGGKYEKWYALFEATATFLYTPGTVTHKASHVRDALDSKRMMVLVWLSLFPAMFYGMYNVGAQAIL
ATDALGTLQQAISGHWQYALSHALGADLTLSAGWASKMLLGATYFLPIYLTIFLVGGFWEVLFAMVRKHEINEGFFVTSI
LLALIVPPTLPLWQAALATTFGVVVAKEIFGGVGKNFMNPALAARAFLFFAYPAQISGDTVWVAADGFSGATALSQWAVG
GEAGLKHVVTGQPITWMDAFIGNIPGSIGEVSTLALIIGAAIIVFARIASWRIIAGVMIGMIATSALFNLIGSSTNPLFA
MPWYWHFVLGGFALGMFFMATDPVSAAFTNKGKWWYGILIGAMAVLIRVVNPAYPEGMMLAILFANLFAPVFDYLVVQAN
IKRRRARNV

Specific function: NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na(+) ions from the cytoplasm to the periplasm. NqrA to nqrE are probably involved in the second step, the conversion of ubisemiqui

COG id: COG1805

COG function: function code C; Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrB

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nqrB/rnfD family

Homologues:

Organism=Escherichia coli, GI1787917, Length=292, Percent_Identity=28.0821917808219, Blast_Score=105, Evalue=6e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NQRB_PASMU (Q9CLB0)

Other databases:

- EMBL:   AE004439
- RefSeq:   NP_246267.1
- GeneID:   1244676
- GenomeReviews:   AE004439_GR
- KEGG:   pmu:PM1329
- NMPDR:   fig|272843.1.peg.1330
- HOGENOM:   HBG454412
- OMA:   TVFYTPG
- ProtClustDB:   PRK05349
- BioCyc:   PMUL272843:PM1329-MONOMER
- HAMAP:   MF_00426
- InterPro:   IPR010966
- InterPro:   IPR004338
- PIRSF:   PIRSF016055
- TIGRFAMs:   TIGR01937

Pfam domain/function: PF03116 NQR2_RnfD_RnfE

EC number: NA

Molecular weight: Translated: 44563; Mature: 44432

Theoretical pI: Translated: 9.62; Mature: 9.62

Prosite motif: PS00089 RIBORED_LARGE ; PS00211 ABC_TRANSPORTER_1

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xb104de0)-; HASH(0xe3e93c8)-; HASH(0xe07dc80)-; HASH(0xeb01974)-; HASH(0xe7e8d24)-; HASH(0xbf3f274)-; HASH(0xe6eb5f8)-; HASH(0xea40fe0)-;

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGLKHFIEKIEPAFLPGGKYEKWYALFEATATFLYTPGTVTHKASHVRDALDSKRMMVLV
CCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHCCCHHHHHH
WLSLFPAMFYGMYNVGAQAILATDALGTLQQAISGHWQYALSHALGADLTLSAGWASKML
HHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCHHHHHH
LGATYFLPIYLTIFLVGGFWEVLFAMVRKHEINEGFFVTSILLALIVPPTLPLWQAALAT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHHHHHH
TFGVVVAKEIFGGVGKNFMNPALAARAFLFFAYPAQISGDTVWVAADGFSGATALSQWAV
HHHHHHHHHHHHHHCHHHCCHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCHHHHHHHCC
GGEAGLKHVVTGQPITWMDAFIGNIPGSIGEVSTLALIIGAAIIVFARIASWRIIAGVMI
CCHHCCCCEECCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GMIATSALFNLIGSSTNPLFAMPWYWHFVLGGFALGMFFMATDPVSAAFTNKGKWWYGIL
HHHHHHHHHHHHCCCCCCCEECHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCHHHHH
IGAMAVLIRVVNPAYPEGMMLAILFANLFAPVFDYLVVQANIKRRRARNV
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
>Mature Secondary Structure 
GLKHFIEKIEPAFLPGGKYEKWYALFEATATFLYTPGTVTHKASHVRDALDSKRMMVLV
CHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHCCCHHHHHH
WLSLFPAMFYGMYNVGAQAILATDALGTLQQAISGHWQYALSHALGADLTLSAGWASKML
HHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCHHHHHH
LGATYFLPIYLTIFLVGGFWEVLFAMVRKHEINEGFFVTSILLALIVPPTLPLWQAALAT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHHHHHH
TFGVVVAKEIFGGVGKNFMNPALAARAFLFFAYPAQISGDTVWVAADGFSGATALSQWAV
HHHHHHHHHHHHHHCHHHCCHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCHHHHHHHCC
GGEAGLKHVVTGQPITWMDAFIGNIPGSIGEVSTLALIIGAAIIVFARIASWRIIAGVMI
CCHHCCCCEECCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GMIATSALFNLIGSSTNPLFAMPWYWHFVLGGFALGMFFMATDPVSAAFTNKGKWWYGIL
HHHHHHHHHHHHCCCCCCCEECHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCHHHHH
IGAMAVLIRVVNPAYPEGMMLAILFANLFAPVFDYLVVQANIKRRRARNV
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11248100