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The map label for this gene is kdtA [H]

Identifier: 15603170

GI number: 15603170

Start: 1499476

End: 1500759

Strand: Reverse

Name: kdtA [H]

Synonym: PM1305

Alternate gene names: 15603170

Gene position: 1500759-1499476 (Counterclockwise)

Preceding gene: 15603176

Following gene: 15603169

Centisome position: 66.48

GC content: 42.29

Gene sequence:

>1284_bases
ATGTTACGTTTCGTCTATACCGTCTTAATGTATTTGATTCAACCTTTGGTTGTCTTATTTATGCTAGGACGTAGCTTAAA
AGCCCCAAATTACCGTAAACGCCTTAATGAACGTTATGGCTTTTATTGTGGTGCAGTGCCACCAAAAGCAAATGGTGTTG
TCATCCATGCGGCCTCTGTGGGCGAGGTTATTGCGGCAACGCCACTGATTAAGCGTCTGCAAGCCCTTTATCCGACGTTA
CCCCTGACAGTCACCACGGTGACCCCCACCGGCTCTGATCGAGTGAAGGCCGCCTTTGGCGACAGTGTTACTCACTTTTA
CTTACCTTACGATTTACCGGATGCCGTTAACCGTTTTATTGCCTTTGTGCAACCGAAAGTCTGTATTGTGATTGAAACTG
AAATTTGGCCCAATTTAATTGTGCAACTCAAAAAACAAGCCATTCCGTTTATTATTGCTAATGCGCGTTTATCCGCACGT
TCAACACAGCGTTATCACTGGTTCAAAGGCGCACTACATCACATTTTTGATCACATCAGTCTAATTGCATCACAAGATAA
CGTCAGTGCTCAACGTTATTTATCGCTCGGTTATGATGCGCAACGTTTAAAATTAACTGGCAACATCAAATATGATTTAG
TACTCAACGATGCGCTGATGCAACAAGTTGCGTCACTCAAACAGGCTTGGGTTGATCAACGCCCGGTGTGGATCGCGGCA
AGTACACATGAGGGAGAAGAAGATCTTATCTTAGAAACTCATCGTCTCTTACTACATAAATACCCAAATCTATTGTTAAT
TCTTGTCCCTCGTCATCCAGAACGCTTTAATATGGTGGCGGAATTAATTAAAAAACATAAATTGACTTACGTTCGTCGTA
GCGATCATGTTACGCCCGATGGCTCAACTCAAGTTGTACTTGGTGATACCATGGGTGAGCTGATGTTGATGTATGGGCTT
GCCGATATTGCTTTTGTGGGAGGCAGTTTGGTTAAGCATGGGGGACATAATCCACTCGAACCACTTGCCTTTAAATTACC
TGTCATCAGTGGTAAATACACCTTTAACTTCCCTGAAGTGTTTACAAAACTGTTGCAAGTACAAGGCGTATTAGAAGTGA
ATGAAAACACCAAAGCCCTGACCAATGCAGTCGAAAAATTTTTAGATTCACAAGAATTACGTGAGCGTTATGGCAATGCG
GGTTATGAAGTCCTGATTGAAAATCGTGGCGCCTTACAACGTTTGTTAGATTTATTAGATCCTTATTTAAGTAAAACAGT
ATGA

Upstream 100 bases:

>100_bases
AACGCTAAGTGTTGGCATACTTTAATCCTTTATGTCTTGAGTGCAACAGTTTATACTAAGGGCAATGTCTGTCATTTTAA
CATAACCGAATATTTATGCT

Downstream 100 bases:

>100_bases
TTACGGTTATTTACCCTGGTACCTTTGATCCCATTACGAATGGACATCTAGATATTATTCAACGTACCGCACGTTTATTT
CCCAATGTGTTAGTCGCCGT

Product: 3-deoxy-D-manno-octulosonic-acid transferase

Products: NA

Alternate protein names: KDO transferase [H]

Number of amino acids: Translated: 427; Mature: 427

Protein sequence:

>427_residues
MLRFVYTVLMYLIQPLVVLFMLGRSLKAPNYRKRLNERYGFYCGAVPPKANGVVIHAASVGEVIAATPLIKRLQALYPTL
PLTVTTVTPTGSDRVKAAFGDSVTHFYLPYDLPDAVNRFIAFVQPKVCIVIETEIWPNLIVQLKKQAIPFIIANARLSAR
STQRYHWFKGALHHIFDHISLIASQDNVSAQRYLSLGYDAQRLKLTGNIKYDLVLNDALMQQVASLKQAWVDQRPVWIAA
STHEGEEDLILETHRLLLHKYPNLLLILVPRHPERFNMVAELIKKHKLTYVRRSDHVTPDGSTQVVLGDTMGELMLMYGL
ADIAFVGGSLVKHGGHNPLEPLAFKLPVISGKYTFNFPEVFTKLLQVQGVLEVNENTKALTNAVEKFLDSQELRERYGNA
GYEVLIENRGALQRLLDLLDPYLSKTV

Sequences:

>Translated_427_residues
MLRFVYTVLMYLIQPLVVLFMLGRSLKAPNYRKRLNERYGFYCGAVPPKANGVVIHAASVGEVIAATPLIKRLQALYPTL
PLTVTTVTPTGSDRVKAAFGDSVTHFYLPYDLPDAVNRFIAFVQPKVCIVIETEIWPNLIVQLKKQAIPFIIANARLSAR
STQRYHWFKGALHHIFDHISLIASQDNVSAQRYLSLGYDAQRLKLTGNIKYDLVLNDALMQQVASLKQAWVDQRPVWIAA
STHEGEEDLILETHRLLLHKYPNLLLILVPRHPERFNMVAELIKKHKLTYVRRSDHVTPDGSTQVVLGDTMGELMLMYGL
ADIAFVGGSLVKHGGHNPLEPLAFKLPVISGKYTFNFPEVFTKLLQVQGVLEVNENTKALTNAVEKFLDSQELRERYGNA
GYEVLIENRGALQRLLDLLDPYLSKTV
>Mature_427_residues
MLRFVYTVLMYLIQPLVVLFMLGRSLKAPNYRKRLNERYGFYCGAVPPKANGVVIHAASVGEVIAATPLIKRLQALYPTL
PLTVTTVTPTGSDRVKAAFGDSVTHFYLPYDLPDAVNRFIAFVQPKVCIVIETEIWPNLIVQLKKQAIPFIIANARLSAR
STQRYHWFKGALHHIFDHISLIASQDNVSAQRYLSLGYDAQRLKLTGNIKYDLVLNDALMQQVASLKQAWVDQRPVWIAA
STHEGEEDLILETHRLLLHKYPNLLLILVPRHPERFNMVAELIKKHKLTYVRRSDHVTPDGSTQVVLGDTMGELMLMYGL
ADIAFVGGSLVKHGGHNPLEPLAFKLPVISGKYTFNFPEVFTKLLQVQGVLEVNENTKALTNAVEKFLDSQELRERYGNA
GYEVLIENRGALQRLLDLLDPYLSKTV

Specific function: Essential step in lipopolysaccharides biosynthesis. Acts at transfer of 3-deoxy-D-mono octulonic acid (KDO) from CMP-KDO to a tetraacyldisaccharide 1,4'-bisphosphate precursor of lipid A (lipid IVA). Transfers a single molecule of KDO to lipid IVA [H]

COG id: COG1519

COG function: function code M; 3-deoxy-D-manno-octulosonic-acid transferase

Gene ontology:

Cell location: Cell inner membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 1 family [H]

Homologues:

Organism=Escherichia coli, GI1790064, Length=423, Percent_Identity=51.063829787234, Blast_Score=446, Evalue=1e-126,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001296
- InterPro:   IPR007507 [H]

Pfam domain/function: PF00534 Glycos_transf_1; PF04413 Glycos_transf_N [H]

EC number: 2.-.-.-

Molecular weight: Translated: 48196; Mature: 48196

Theoretical pI: Translated: 9.54; Mature: 9.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRFVYTVLMYLIQPLVVLFMLGRSLKAPNYRKRLNERYGFYCGAVPPKANGVVIHAASV
CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCEEECCCCCCCCCEEEEECCC
GEVIAATPLIKRLQALYPTLPLTVTTVTPTGSDRVKAAFGDSVTHFYLPYDLPDAVNRFI
CHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCEEECCCCCCEEEEECCCCHHHHHHHH
AFVQPKVCIVIETEIWPNLIVQLKKQAIPFIIANARLSARSTQRYHWFKGALHHIFDHIS
HHCCCCEEEEEECCHHHHHHHHHHHHCCCEEEECCEECCCCCHHHHHHHHHHHHHHHHHH
LIASQDNVSAQRYLSLGYDAQRLKLTGNIKYDLVLNDALMQQVASLKQAWVDQRPVWIAA
HHCCCCCCCHHHHHHCCCCCEEEEEECCEEEEEEECHHHHHHHHHHHHHHCCCCCEEEEE
STHEGEEDLILETHRLLLHKYPNLLLILVPRHPERFNMVAELIKKHKLTYVRRSDHVTPD
CCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHEEECCCCCCCC
GSTQVVLGDTMGELMLMYGLADIAFVGGSLVKHGGHNPLEPLAFKLPVISGKYTFNFPEV
CCCEEEECCHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCEEEEEEECCCEEECHHHH
FTKLLQVQGVLEVNENTKALTNAVEKFLDSQELRERYGNAGYEVLIENRGALQRLLDLLD
HHHHHHHHHHEEECCCHHHHHHHHHHHHCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHH
PYLSKTV
HHHHCCC
>Mature Secondary Structure
MLRFVYTVLMYLIQPLVVLFMLGRSLKAPNYRKRLNERYGFYCGAVPPKANGVVIHAASV
CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCEEECCCCCCCCCEEEEECCC
GEVIAATPLIKRLQALYPTLPLTVTTVTPTGSDRVKAAFGDSVTHFYLPYDLPDAVNRFI
CHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCEEECCCCCCEEEEECCCCHHHHHHHH
AFVQPKVCIVIETEIWPNLIVQLKKQAIPFIIANARLSARSTQRYHWFKGALHHIFDHIS
HHCCCCEEEEEECCHHHHHHHHHHHHCCCEEEECCEECCCCCHHHHHHHHHHHHHHHHHH
LIASQDNVSAQRYLSLGYDAQRLKLTGNIKYDLVLNDALMQQVASLKQAWVDQRPVWIAA
HHCCCCCCCHHHHHHCCCCCEEEEEECCEEEEEEECHHHHHHHHHHHHHHCCCCCEEEEE
STHEGEEDLILETHRLLLHKYPNLLLILVPRHPERFNMVAELIKKHKLTYVRRSDHVTPD
CCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHEEECCCCCCCC
GSTQVVLGDTMGELMLMYGLADIAFVGGSLVKHGGHNPLEPLAFKLPVISGKYTFNFPEV
CCCEEEECCHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCEEEEEEECCCEEECHHHH
FTKLLQVQGVLEVNENTKALTNAVEKFLDSQELRERYGNAGYEVLIENRGALQRLLDLLD
HHHHHHHHHHEEECCCHHHHHHHHHHHHCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHH
PYLSKTV
HHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Transferring phosphorus-containing groups [C]

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10952982; 7542800 [H]