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The map label for this gene is dcuD [C]

Identifier: 15603164

GI number: 15603164

Start: 1492522

End: 1493820

Strand: Direct

Name: dcuD [C]

Synonym: PM1299

Alternate gene names: 15603164

Gene position: 1492522-1493820 (Clockwise)

Preceding gene: 15603163

Following gene: 15603165

Centisome position: 66.11

GC content: 42.49

Gene sequence:

>1299_bases
ATGGTGGCATTGAAAGCAATTATTGCGCTTACTGGCATTATTGTTGCTGTCTATTTATTAATAAAGAAATATGAAACACG
CACAGTATTAATTGGTGTAGGGTTGTTCATGGCGATTGCAACACTTAACCCAATGGGGGCACTCGATGCATTTGCGAAAA
GCATGACATCGGCAGGGCTAATTATGGCAATTTGTTCGAGTATGGGCTTTGCTTATGTGATGAAATATACGCAATGCGAT
ACGCATTTAGTCCATTTATTAACAAAACCATTAAGTGGCTTGAAGTTTTTCTTAATTCCTATCGCCACAATCATTACCTT
CTTTGTTAACATTGCGATTCCTTCTGCAGCAGGTTGTGCGGCAGCCGTGGGGGCGACGCTCATTCCAGTATTAAAAAGTT
CCGGTGTTCGTCCAGCAACAGCAGGGGCAGCAATTCTTGCGGGAACGTTTGGATCGATGATGAGTCCGGGATCGTCGCAT
TCAGCCATGTTAAGTGAAATGTCAGGTTTAACGGTGACACAAGTTAACTTATCTCATGCGCCTTATACGATGATTGCAGG
GGCGATCGGGGCTGTGATGTTAACGATTTTAGCGATTGTGTTTAAAGATTATGGGGAAGAACACCGTCAAGCGTATTTGC
TTGAAAATAAAGAGAGTGAGCAAAATGCAGAAAATATGAAAGTGAATATTTTTTATGCATTAGCACCATTAGTACCTTTA
GTGATTTTAGTTATTGGTGGAACATCTTTACAAAAAATGCCGGGTTTAGAATGGACGAAAATGGGTGTACCACAAGCGAT
GTTAATTGGTTCATTATATGCTGTTGTGATGACACGCATTTCACCGGTCAAAATTACAAATGAGTTCTTTAATGGAATGG
GTAATTCTTATGCGAATGTGTTAGGTATCATCATTGCGGCAAGCGTCTTTGTTGCGGGTTTAAAATCAACAGGAGCCATT
GATAGCGCGATTGAATTCCTGAAACATTCAAATGAATTTGTGCGTTGGGGAGCAACCATAGGACCATTCTTAATGGGCAT
TGTGACTGGATCGGGAGATGCTGCCGCGATTGCGTTCAATACCGCGGTGACGCCTCATGCAGTCGAATTAGGTTATACCC
ACGTTAATTTAGGTATGGCTGCTGCGATTGCGGGGGCAATTGGACGTACAGCCTCTCCAATTGCTGGCGTGACAATTGTC
TGTGCAGGTTTAGCGATGGTTAGTCCGGTTGAAATGGTCAAACGCACTGCACCAGGCATGATTCTCGCGATCTTATTTTT
AGCATTGTTTATGTTGTAA

Upstream 100 bases:

>100_bases
CATACTGAGTGCAAGATTTTTTTGATAGTAAAGTGTCAAGATTATTAAAAATATCTTGTTTTGGTCAGTAGTTAACATTT
AAGACATTGAGGAGCTGATT

Downstream 100 bases:

>100_bases
TCATAAAGAGGAGCGATTCAATGAGTATAACACTTGAACAACTCATCCAATGGCGTCGTGAATTTCACCGTTTTCCAGAG
ATTGGTTGGTCTGAGTTTTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 432; Mature: 432

Protein sequence:

>432_residues
MVALKAIIALTGIIVAVYLLIKKYETRTVLIGVGLFMAIATLNPMGALDAFAKSMTSAGLIMAICSSMGFAYVMKYTQCD
THLVHLLTKPLSGLKFFLIPIATIITFFVNIAIPSAAGCAAAVGATLIPVLKSSGVRPATAGAAILAGTFGSMMSPGSSH
SAMLSEMSGLTVTQVNLSHAPYTMIAGAIGAVMLTILAIVFKDYGEEHRQAYLLENKESEQNAENMKVNIFYALAPLVPL
VILVIGGTSLQKMPGLEWTKMGVPQAMLIGSLYAVVMTRISPVKITNEFFNGMGNSYANVLGIIIAASVFVAGLKSTGAI
DSAIEFLKHSNEFVRWGATIGPFLMGIVTGSGDAAAIAFNTAVTPHAVELGYTHVNLGMAAAIAGAIGRTASPIAGVTIV
CAGLAMVSPVEMVKRTAPGMILAILFLALFML

Sequences:

>Translated_432_residues
MVALKAIIALTGIIVAVYLLIKKYETRTVLIGVGLFMAIATLNPMGALDAFAKSMTSAGLIMAICSSMGFAYVMKYTQCD
THLVHLLTKPLSGLKFFLIPIATIITFFVNIAIPSAAGCAAAVGATLIPVLKSSGVRPATAGAAILAGTFGSMMSPGSSH
SAMLSEMSGLTVTQVNLSHAPYTMIAGAIGAVMLTILAIVFKDYGEEHRQAYLLENKESEQNAENMKVNIFYALAPLVPL
VILVIGGTSLQKMPGLEWTKMGVPQAMLIGSLYAVVMTRISPVKITNEFFNGMGNSYANVLGIIIAASVFVAGLKSTGAI
DSAIEFLKHSNEFVRWGATIGPFLMGIVTGSGDAAAIAFNTAVTPHAVELGYTHVNLGMAAAIAGAIGRTASPIAGVTIV
CAGLAMVSPVEMVKRTAPGMILAILFLALFML
>Mature_432_residues
MVALKAIIALTGIIVAVYLLIKKYETRTVLIGVGLFMAIATLNPMGALDAFAKSMTSAGLIMAICSSMGFAYVMKYTQCD
THLVHLLTKPLSGLKFFLIPIATIITFFVNIAIPSAAGCAAAVGATLIPVLKSSGVRPATAGAAILAGTFGSMMSPGSSH
SAMLSEMSGLTVTQVNLSHAPYTMIAGAIGAVMLTILAIVFKDYGEEHRQAYLLENKESEQNAENMKVNIFYALAPLVPL
VILVIGGTSLQKMPGLEWTKMGVPQAMLIGSLYAVVMTRISPVKITNEFFNGMGNSYANVLGIIIAASVFVAGLKSTGAI
DSAIEFLKHSNEFVRWGATIGPFLMGIVTGSGDAAAIAFNTAVTPHAVELGYTHVNLGMAAAIAGAIGRTASPIAGVTIV
CAGLAMVSPVEMVKRTAPGMILAILFLALFML

Specific function: Cryptic C4-dicarboxylate carrier [C]

COG id: COG3069

COG function: function code C; C4-dicarboxylate transporter

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dcuC/dcuD transporter (TC 2.A.61) family [H]

Homologues:

Organism=Escherichia coli, GI1789622, Length=451, Percent_Identity=25.9423503325942, Blast_Score=101, Evalue=1e-22,
Organism=Escherichia coli, GI1786839, Length=373, Percent_Identity=25.201072386059, Blast_Score=66, Evalue=5e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018385
- InterPro:   IPR004669 [H]

Pfam domain/function: PF03606 DcuC [H]

EC number: NA

Molecular weight: Translated: 45002; Mature: 45002

Theoretical pI: Translated: 9.04; Mature: 9.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
5.8 %Met     (Translated Protein)
6.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
5.8 %Met     (Mature Protein)
6.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVALKAIIALTGIIVAVYLLIKKYETRTVLIGVGLFMAIATLNPMGALDAFAKSMTSAGL
CHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
IMAICSSMGFAYVMKYTQCDTHLVHLLTKPLSGLKFFLIPIATIITFFVNIAIPSAAGCA
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCHHH
AAVGATLIPVLKSSGVRPATAGAAILAGTFGSMMSPGSSHSAMLSEMSGLTVTQVNLSHA
HHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHCCCEEEEEECCCC
PYTMIAGAIGAVMLTILAIVFKDYGEEHRQAYLLENKESEQNAENMKVNIFYALAPLVPL
CHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCCCCCCEEEEEEHHHHHHHHH
VILVIGGTSLQKMPGLEWTKMGVPQAMLIGSLYAVVMTRISPVKITNEFFNGMGNSYANV
HHHHHCCCCHHHCCCCCHHHCCCCHHHHHHHHHHHHHHHCCCCEEHHHHHCCCCHHHHHH
LGIIIAASVFVAGLKSTGAIDSAIEFLKHSNEFVRWGATIGPFLMGIVTGSGDAAAIAFN
HHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHEECCCHHHHHHHHHEECCCCEEEEEEE
TAVTPHAVELGYTHVNLGMAAAIAGAIGRTASPIAGVTIVCAGLAMVSPVEMVKRTAPGM
CCCCCCHHEECCEEEHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHH
ILAILFLALFML
HHHHHHHHHHHC
>Mature Secondary Structure
MVALKAIIALTGIIVAVYLLIKKYETRTVLIGVGLFMAIATLNPMGALDAFAKSMTSAGL
CHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
IMAICSSMGFAYVMKYTQCDTHLVHLLTKPLSGLKFFLIPIATIITFFVNIAIPSAAGCA
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCHHH
AAVGATLIPVLKSSGVRPATAGAAILAGTFGSMMSPGSSHSAMLSEMSGLTVTQVNLSHA
HHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHCCCEEEEEECCCC
PYTMIAGAIGAVMLTILAIVFKDYGEEHRQAYLLENKESEQNAENMKVNIFYALAPLVPL
CHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCCCCCCEEEEEEHHHHHHHHH
VILVIGGTSLQKMPGLEWTKMGVPQAMLIGSLYAVVMTRISPVKITNEFFNGMGNSYANV
HHHHHCCCCHHHCCCCCHHHCCCCHHHHHHHHHHHHHHHCCCCEEHHHHHCCCCHHHHHH
LGIIIAASVFVAGLKSTGAIDSAIEFLKHSNEFVRWGATIGPFLMGIVTGSGDAAAIAFN
HHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHEECCCHHHHHHHHHEECCCCEEEEEEE
TAVTPHAVELGYTHVNLGMAAAIAGAIGRTASPIAGVTIVCAGLAMVSPVEMVKRTAPGM
CCCCCCHHEECCEEEHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHH
ILAILFLALFML
HHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]